BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,339,304	+C	coding (398/987 nt)	yrbH →	putative isomerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,339,301	1	.	C	99.0%	1239.9 / 2.5	392	coding (395/987 nt)	yrbH	putative isomerase
Reads supporting (aligned to +/- strand): ref base . (2/2); new base C (182/206); total (184/208)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 434 total aligned reads displayed.

TGCTATCTCTAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑C‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGAC  >  NC_000913/3339209‑3339388

 gCTATCTCTAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGTTCG‑c                                                                                          >  1:9831169/1‑93 (MQ=255)

    aTCTCTAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑c‑ccc                                                                                      <  2:4216667/93‑2 (MQ=255)

     tctcTAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑C‑CC‑gg                                                                                    <  2:4909663/93‑1 (MQ=255)

      ctctAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑c‑cccgg                                                                                    >  1:5310158/1‑90 (MQ=255)

      ctctAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑c‑cccgg                                                                                    >  2:6205503/1‑90 (MQ=255)

       tctAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑c‑cccgga                                                                                   >  1:1911480/1‑89 (MQ=255)

       tctAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑c‑cccgga                                                                                   >  1:4511634/1‑89 (MQ=255)

         tAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑Ggaga                                                                                 <  2:6980560/93‑1 (MQ=255)

         tAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑Ggaga                                                                                 <  1:6442475/93‑1 (MQ=255)

         tAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑Ggaga                                                                                 >  2:7793560/1‑93 (MQ=255)

           aCTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGagc                                                                               >  2:4712533/1‑93 (MQ=255)

            ctctGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGagca                                                                              >  2:4294353/1‑93 (MQ=255)

             tctGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGagcag                                                                             >  2:5899181/1‑93 (MQ=255)

             tctGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGagcag                                                                             <  2:538839/93‑1 (MQ=255)

             tctGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGagcag                                                                             >  1:1463950/1‑93 (MQ=255)

              ctGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGagcagc                                                                            >  1:9568418/1‑93 (MQ=255)

                ggTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCAt                                                                          <  1:3619911/93‑1 (MQ=255)

                ggTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCAt                                                                          <  2:1839967/93‑1 (MQ=255)

                  tGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATgg                                                                        >  1:10024663/1‑93 (MQ=255)

                   gAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGgc                                                                       <  1:3805972/93‑1 (MQ=255)

                       ccAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGgcgcgc                                                                   >  1:7078427/1‑93 (MQ=255)

                       ccAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGgcgcgc                                                                   <  1:47063/93‑1 (MQ=255)

                            gAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGcgccgc                                                              <  2:7610236/93‑1 (MQ=255)

                             aaaTCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCa                                                             >  1:1194638/1‑93 (MQ=255)

                              aaTCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAg                                                            >  1:4167546/1‑93 (MQ=255)

                              aaTCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAg                                                            >  1:2985521/1‑93 (MQ=255)

                              aaTCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAg                                                            <  1:6601579/93‑1 (MQ=255)

                               aTCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGa                                                           <  1:6636470/93‑1 (MQ=255)

                               aTCACGGCCTTAATTCCAGTGCTGAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGa                                                           <  2:5507717/93‑1 (MQ=255)

                                tCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGAt                                                          <  2:3186322/93‑1 (MQ=255)

                                tCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGAt                                                          >  1:6280614/1‑93 (MQ=255)

                                 cACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGAtg                                                         <  2:708732/93‑1 (MQ=255)

                                 cACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGAtg                                                         <  1:6825805/93‑1 (MQ=255)

                                 cACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGAtg                                                         <  1:9023751/93‑1 (MQ=255)

                                   cGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGAtgtg                                                       <  2:1303404/93‑1 (MQ=255)

                                       cTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATc                                                   <  2:7972461/93‑1 (MQ=255)

                                       cTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATc                                                   <  2:1443460/93‑1 (MQ=255)

                                       cTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑C‑CCTGCAGTGAAGCATGGCGCGCGCCGCAGATGAGCATc                                                   >  1:7155593/1‑93 (MQ=255)

                                        ttAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCt                                                  >  1:3100858/1‑93 (MQ=255)

                                           aTTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCtgtg                                               <  1:8290164/93‑1 (MQ=255)

                                            ttCCAGTGCTTAAGCGTCTTCCCGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCtgtgt                                              <  2:3001860/93‑1 (MQ=255)

                                            ttCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCtgtgt                                              >  2:4166520/1‑93 (MQ=255)

                                             tCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCtgtgtg                                             <  1:9239692/93‑1 (MQ=255)

                                             tCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCtgtgtg                                             <  2:194072/93‑1 (MQ=255)

                                              ccAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑C‑CC‑GGAGTGCCGCATGGTGAGCGCCGCAGAGGTGCATCTttgtgtc                                           >  1:2558004/1‑92 (MQ=255)

                                               cAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGtt                                           <  2:3772714/93‑1 (MQ=255)

                                                aGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTa                                          <  2:7016065/93‑1 (MQ=255)

                                                 gTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTaa                                         <  2:9510373/93‑1 (MQ=255)

                                                  tGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTaaa                                        >  2:5766836/1‑93 (MQ=255)

                                                  tGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTaaa                                        <  1:9716132/93‑1 (MQ=255)

                                                  tGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTATGTTaaa                                        <  1:4003982/93‑1 (MQ=255)

                                                  ggCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTaaa                                        <  1:1619963/92‑1 (MQ=255)

                                                   gCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAg                                       <  2:3406795/93‑1 (MQ=255)

                                                     ttAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTa                                     <  2:821380/93‑1 (MQ=255)

                                                       aaGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGc                                   >  2:6113210/1‑93 (MQ=255)

                                                        aGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCg                                  <  1:5611177/93‑1 (MQ=255)

                                                        aGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCg                                  <  1:2134728/93‑1 (MQ=255)

                                                         gCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGa                                 <  1:6128982/93‑1 (MQ=255)

                                                           gtcgtcACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGaaa                               <  2:9433778/93‑1 (MQ=255)

                                                           gTCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGaca                               >  1:857719/1‑91 (MQ=255)

                                                            tCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaag                              <  2:2417328/93‑1 (MQ=255)

                                                            tCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaag                              <  2:6797576/93‑1 (MQ=255)

                                                            tCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaag                              <  1:7594685/93‑1 (MQ=255)

                                                            tCTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaag                              >  1:6497979/1‑93 (MQ=255)

                                                            tCTTCACGAACCGTTAATCTGCATTACCGGTCGCC‑CC‑GGAGAGAAGCATGTCGCGCGCCGCAGATGTGCATCTGTGTGTTAATGTAGAGaaac                              >  2:2523874/1‑92 (MQ=255)

                                                             tttCACGTACCGTTAATTTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGGGCGCCGCAGATGTGCATCTTTTTTTTAAAGTAGCGAaaga                             <  2:6417169/92‑1 (MQ=255)

                                                             ttccACGTACCGTTAATCTGCAGCACCGGTCG‑CTAC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaaga                             <  2:5604758/90‑1 (MQ=255)

                                                             cTTCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaaga                             <  2:2161557/93‑1 (MQ=255)

                                                              ttCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaagaa                            <  1:1823255/93‑1 (MQ=255)

                                                              ttCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaagaa                            <  1:7850954/93‑1 (MQ=255)

                                                              ttCACGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAaagaa                            <  2:7431958/93‑1 (MQ=255)

                                                                  cGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCt                        <  2:4966423/93‑1 (MQ=255)

                                                                  cGTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCt                        <  1:2615908/93‑1 (MQ=255)

                                                                   gTACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTg                       >  1:9192579/1‑93 (MQ=255)

                                                                   gTACAGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGTGAAAAGCCTg                       <  2:8922617/93‑1 (MQ=255)

                                                                    tACCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGt                      <  1:7798366/93‑1 (MQ=255)

                                                                     aCCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTc                     <  1:7348442/93‑1 (MQ=255)

                                                                     aCCGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTc                     <  1:2230390/93‑1 (MQ=255)

                                                                      ccGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTcc                    <  1:8405132/93‑1 (MQ=255)

                                                                      ccGTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTcc                    >  1:5753919/1‑93 (MQ=255)

                                                                        gTTAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGt                  <  2:2063007/93‑1 (MQ=255)

                                                                         ttAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGtt                 <  1:3241152/93‑1 (MQ=255)

                                                                          tAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTa                <  1:9368720/93‑1 (MQ=255)

                                                                          tAATCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTa                <  2:9738647/93‑1 (MQ=255)

                                                                           aaTCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAg               <  2:1642204/93‑1 (MQ=255)

                                                                           aaTCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAg               <  1:2740714/93‑1 (MQ=255)

                                                                           aaTCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAg               <  1:5051530/93‑1 (MQ=255)

                                                                            aTCTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAgg              >  2:5130447/1‑93 (MQ=255)

                                                                              cTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGc            <  1:3586718/93‑1 (MQ=255)

                                                                              cTGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGc            <  2:3668951/93‑1 (MQ=255)

                                                                               tGCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTGAAGTAGCGAAAGAAGCCTGTCCGTTAGGGcg           >  2:2812189/1‑92 (MQ=255)

                                                                                gCATCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTg          <  2:7523594/93‑1 (MQ=255)

                                                                                   tCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTTGCa       <  2:9838805/93‑1 (MQ=255)

                                                                                   tCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCa       >  2:8531799/1‑93 (MQ=255)

                                                                                   tCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCa       >  2:8638727/1‑93 (MQ=255)

                                                                                   tCACCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCa       >  2:1039551/1‑93 (MQ=255)

                                                                                     aCCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCAcc     <  2:8289515/93‑1 (MQ=255)

                                                                                     aCCGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCAcc     >  2:9313768/1‑93 (MQ=255)

                                                                                       cGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGa   >  2:7212633/1‑93 (MQ=255)

                                                                                       cGGTCGCC‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGa   <  1:2286778/93‑1 (MQ=255)

TGCTATCTCTAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCG‑C‑CC‑GGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGAC  >  NC_000913/3339209‑3339388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`