BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,575,446	+G	coding (912/942 nt)	gntR ←	GntR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,575,445	1	.	G	99.3%	1301.8 / ‑0.3	411	coding (913/942 nt)	gntR	GntR
Reads supporting (aligned to +/- strand): ref base . (1/2); new base G (189/219); total (190/221)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 464 total aligned reads displayed.

ATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCA‑G‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACC  >  NC_000913/3575353‑3575532

aTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca                                                                                           <  1:8331864/93‑1 (MQ=255)

aTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca                                                                                           >  1:5083984/1‑93 (MQ=255)

aTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca                                                                                           <  1:4503250/93‑1 (MQ=255)

aTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca                                                                                           >  2:9169166/1‑93 (MQ=255)

aTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca                                                                                           <  2:1047892/93‑1 (MQ=255)

aTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAACCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca                                                                                           <  2:6541862/93‑1 (MQ=255)

 tttGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca‑g                                                                                         >  1:7468617/1‑93 (MQ=255)

  ttGTGGGCTTAAATAGATCCGCCGGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca‑gg                                                                                        <  2:5527299/93‑2 (MQ=255)

    gtgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca‑ggcg                                                                                      <  1:7188066/93‑4 (MQ=255)

    gtgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATAAGCGCcagca‑ggcg                                                                                      >  2:1317222/1‑90 (MQ=255)

     tgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca‑ggcgt                                                                                     <  1:1004010/93‑5 (MQ=255)

     tgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca‑ggcgt                                                                                     <  2:2242802/93‑5 (MQ=255)

     tgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagca‑ggcgt                                                                                     <  1:1462117/93‑5 (MQ=255)

        gCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCa                                                                                  <  1:7705875/93‑1 (MQ=255)

         cTTAAATAGATCCGCCGGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAg                                                                                 <  1:8813071/93‑1 (MQ=255)

          ttAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAgc                                                                                <  1:6842481/93‑1 (MQ=255)

          ttAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAgc                                                                                >  1:1329741/1‑93 (MQ=255)

          ttAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAgc                                                                                >  1:1840619/1‑93 (MQ=255)

          ttAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAgc                                                                                <  1:2299665/93‑1 (MQ=255)

           tAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAgcg                                                                               >  1:5548922/1‑93 (MQ=255)

           tAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAgcg                                                                               <  1:8091510/93‑1 (MQ=255)

             aaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAgcgca                                                                             >  1:9667117/1‑92 (MQ=255)

              aTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCa                                                                            >  2:7914783/1‑93 (MQ=255)

              aTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCa                                                                            <  1:9104359/93‑1 (MQ=255)

               tAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCaa                                                                           >  1:3435288/1‑93 (MQ=255)

                 gATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATa                                                                         <  2:4645390/93‑1 (MQ=255)

                  aTCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGTGCCAATAc                                                                        <  2:5916420/93‑1 (MQ=255)

                  aTCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATAc                                                                        <  2:9475423/93‑1 (MQ=255)

                  aTCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATAc                                                                        <  2:3533698/93‑1 (MQ=255)

                  aTCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATAc                                                                        <  1:1099325/93‑1 (MQ=255)

                        ccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCa                                                                  >  1:9486192/1‑93 (MQ=255)

                         cGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCAt                                                                 >  2:9694009/1‑93 (MQ=255)

                          ggTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATc                                                                <  2:8257010/93‑1 (MQ=255)

                            tGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCg                                                              >  2:9800970/1‑93 (MQ=255)

                             gACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGc                                                             <  2:1953467/93‑1 (MQ=255)

                             gACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGc                                                             >  1:8942667/1‑93 (MQ=255)

                             gACAAGGTGAAACCTAAATCTAACATTTTCGGGGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGc                                                             >  2:8126290/1‑93 (MQ=255)

                               cAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTc                                                           <  1:6043662/93‑1 (MQ=255)

                                aaGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCa                                                          <  1:2001456/93‑1 (MQ=255)

                                 aGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCAc                                                         >  1:1614129/1‑93 (MQ=255)

                                  ggTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCAcg                                                        <  2:4033005/93‑1 (MQ=255)

                                   gTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCAcgc                                                       <  2:9648224/93‑1 (MQ=255)

                                   gTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCA‑GACGTTCAGCGCCAATACTGCCCATCCGCTCAcgc                                                       <  2:1564132/93‑1 (MQ=255)

                                     gAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCA‑GTCGTTCAGCGCCAATACTGCCCATCCGCTCACgcgg                                                     >  2:8438669/1‑93 (MQ=255)

                                      aaaCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCACTACTGCCCATCCGCTCACgcggc                                                    >  1:3001743/1‑93 (MQ=255)

                                      aaaCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACgcggc                                                    <  1:5635899/93‑1 (MQ=255)

                                       aaCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACgcggcg                                                   >  1:2612470/1‑93 (MQ=255)

                                        aCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGt                                                  >  1:4290064/1‑93 (MQ=255)

                                        aCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGt                                                  >  2:7033749/1‑93 (MQ=255)

                                        aCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGt                                                  >  2:4866231/1‑93 (MQ=255)

                                          cTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATCCGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCa                                                <  1:1897992/93‑1 (MQ=255)

                                          cTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCa                                                <  2:2717969/93‑1 (MQ=255)

                                          cTAAATCTAACATTTGCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCa                                                <  2:6172550/93‑1 (MQ=255)

                                             aaTCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCa                                             <  1:4569391/93‑1 (MQ=255)

                                             aaTCTAACATTTGCGGTGTCACAGATTCGCCACTAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCa                                             <  2:5225030/93‑1 (MQ=255)

                                              aTCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCAc                                            <  1:9871967/93‑1 (MQ=255)

                                                 tAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCt                                         >  2:3767167/1‑93 (MQ=255)

                                                  aaCATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTc                                        >  2:902914/1‑93 (MQ=255)

                                                   aCATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCg                                       >  1:641640/1‑93 (MQ=255)

                                                     aTTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCa                                     >  1:9179856/1‑93 (MQ=255)

                                                     aTTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCa                                     <  1:3128245/93‑1 (MQ=255)

                                                     aTTTTCGGTGTCACAGATTCGCCACGAATACACGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCa                                     >  2:7596801/1‑93 (MQ=255)

                                                        ttCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGt                                  <  2:6860744/93‑1 (MQ=255)

                                                        ttCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGt                                  <  2:8885027/93‑1 (MQ=255)

                                                         tCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTc                                 >  2:6034841/1‑93 (MQ=255)

                                                           ggTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGt                               >  1:7981457/1‑93 (MQ=255)

                                                           ggTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGt                               <  2:8531037/93‑1 (MQ=255)

                                                           ggTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGt                               >  2:4441110/1‑93 (MQ=255)

                                                           ggTGTCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGt                               <  2:3433735/93‑1 (MQ=255)

                                                            gtgtCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTg                              >  2:7182043/1‑93 (MQ=255)

                                                            gtgtCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTg                              >  1:9777290/1‑93 (MQ=255)

                                                            gtgtCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTg                              <  2:324476/93‑1 (MQ=255)

                                                             tgtCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCATCACGCTCGCCAGTCGTgg                             >  2:7301448/1‑93 (MQ=255)

                                                               tCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCt                           >  1:6164074/1‑93 (MQ=255)

                                                               tCACAGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCt                           >  2:1020967/1‑93 (MQ=255)

                                                               tCACAGATTCGCCACGAATACGCGACAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGTCt                           >  2:5811660/1‑93 (MQ=255)

                                                                cacaGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTc                          >  2:4991399/1‑93 (MQ=255)

                                                                  caGATTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCa                        <  1:5934510/93‑1 (MQ=255)

                                                                     aTTCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCa                     <  1:7027844/93‑1 (MQ=255)

                                                                       tCGCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAcc                   <  2:633155/93‑1 (MQ=255)

                                                                        cGCCACGAATGCGCGCCAGCAGG‑AGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCt                  <  2:6933994/93‑1 (MQ=255)

                                                                         gCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTg                 >  1:2925098/1‑93 (MQ=255)

                                                                         gCCACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTg                 <  1:4847518/93‑1 (MQ=255)

                                                                          ccACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGa                >  2:3032568/1‑93 (MQ=255)

                                                                           cACGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAc               <  2:9275342/93‑1 (MQ=255)

                                                                            aCGAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAcc              <  2:3326580/93‑1 (MQ=255)

                                                                              gAATACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCaa            <  2:9785409/93‑1 (MQ=255)

                                                                               aaTACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAAt           <  2:4344857/93‑1 (MQ=255)

                                                                               aaTACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAAt           <  1:3286768/93‑1 (MQ=255)

                                                                               aaTACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAAt           >  1:9353085/1‑93 (MQ=255)

                                                                               aaTACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACAAAt           >  1:8547893/1‑93 (MQ=255)

                                                                                 tACGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGt         >  2:2295447/1‑93 (MQ=255)

                                                                                  aCGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTc        >  2:4527936/1‑93 (MQ=255)

                                                                                  aCGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTc        >  1:5355438/1‑93 (MQ=255)

                                                                                  aCGCGCCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTc        <  1:4165809/93‑1 (MQ=255)

                                                                                    gcgcCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCAt      <  1:779604/93‑1 (MQ=255)

                                                                                    gcgcCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCAt      <  1:3719091/93‑1 (MQ=255)

                                                                                     cgcCAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATg     <  2:5369394/93‑1 (MQ=255)

                                                                                       ccAGCAGG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGAc   >  2:1671959/1‑93 (MQ=255)

                                                                                        cagcagG‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCTGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGAcc  <  1:4779103/93‑1 (MQ=255)

ATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCA‑G‑CGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACC  >  NC_000913/3575353‑3575532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`