| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1986123 | 246 (0.680) | 72 (0.190) +CCC |
35/166 | 5.7 | 22.3% | intergenic (+318/‑122) | b1903/b1904 | hypothetical protein/hypothetical protein |
| ? | NC_000913 | 1986124 = | 256 (0.660) | intergenic (+319/‑121) | b1903/b1904 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1986032‑1986123‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAAT > NC_000913/1986124‑1986214 ||| TAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGC < 2:9574050/93‑1TAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGC < 1:1124995/93‑1TAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGC < 1:5230680/93‑1 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC > 2:2271048/1‑93 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC < 1:688218/93‑1 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC > 1:7565348/1‑93 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC > 1:7878420/1‑93 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC < 1:8708052/93‑1 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC < 2:3330177/93‑1 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC < 2:9672451/93‑1 AATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCC < 2:9672452/93‑1 ATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCC < 2:8474355/93‑1 TATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCC < 1:6052121/93‑1 TATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCC < 1:6052122/93‑1 TATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCC < 1:7516073/93‑1 ATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC < 1:3024370/93‑1 ATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC < 1:287929/93‑1 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC < 2:3707650/93‑1 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC < 2:5070457/93‑1 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC < 2:2407935/93‑1 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC < 1:8870816/93‑1 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC > 2:7140917/1‑93 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC < 1:967087/93‑1 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC < 1:8870818/93‑1 TGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCC < 1:8665075/93‑1 GACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCC < 1:8329793/93‑1 GACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCC > 2:23436/1‑93 CATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCCCCctat < 1:3088181/93‑5 TCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCT > 2:403823/1‑93 TCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCT > 2:302736/1‑93 CAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGAC > 2:686464/1‑93 AAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCCCCTATTTCTGAC > 1:8683551/1‑93 AAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACA > 1:7410231/1‑93 AAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACAC < 1:221381/93‑1 AAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACAC < 2:840375/93‑1 AAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACAC > 1:8653381/1‑93 AAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACAC > 1:8653382/1‑93 AAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACAC > 1:372072/1‑93 AAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACC > 1:6423471/1‑93 AAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACC < 2:6991196/93‑1 AATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCT > 2:3266009/1‑93 ATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTA > 2:1833212/1‑93 TCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTAC > 2:2156622/1‑93 TCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGAT < 1:5791432/93‑1 TTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCCCCTATTTCTGACACCTACAGATG > 2:7488020/1‑93 TGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAA > 1:1207894/1‑93 GATACAAATCACATAACTACCCCCTTAATGTTATAAAAATGATAATCAAAAAACTGCCCCCCCCCGAATTGTGACACCTACAGATGGCAcgca > 2:3106079/1‑89 ATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAAT < 2:1436273/93‑1 TACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATA < 1:1734020/93‑1 TACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATA < 1:5203157/93‑1 CAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGC < 1:5320463/93‑1 CATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCC < 1:5746132/93‑1 CATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCC < 1:5746131/93‑1 AATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGC < 2:5572096/93‑1 AATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGC < 1:5244092/93‑1 TACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGT > 2:4197344/1‑93 CCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCT < 2:1214339/93‑1 CCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTT > 2:3271926/1‑93 CTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTT > 1:7782016/1‑93 CTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTT > 1:7782015/1‑93 CTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTT > 2:4352695/1‑93 CTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTT > 2:1268559/1‑93 AATGTTATAAAAATGATAATCAAAAAACAGCCCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCG < 1:4950808/93‑1 GTTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACGCCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCA > 1:5511582/1‑93 TTATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAT > 2:7255926/1‑93 TATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATT > 2:6733388/1‑93 ATAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTG < 1:1159249/93‑1 TAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGT > 2:8301440/1‑93 TAAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGT > 1:5024441/1‑93 AAAAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTC < 1:8301881/93‑1 AAAAATGATAAGCAAAAACCAG‑CCCCCCCCTATTTCAGACACCTACAGATGCTAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTC < 2:5483417/93‑1 AAATGATAATCAAAAAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGC > 2:1597400/1‑93 AAACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCG < 2:8161182/93‑1 AACAG‑CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGT > 1:4069386/1‑93 agCCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAA < 1:6025256/91‑1 CCCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAAT < 2:9543022/93‑1 ||| TAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1986032‑1986123‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAAT > NC_000913/1986124‑1986214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |