BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,436,837	0	T	C	64.9%	443.0 / inf	527	T104A (ACC→GCC)	yhdN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (91/94); new base C (166/176); total (257/270)
Fisher's exact test for biased strand distribution p-value = 9.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 550 total aligned reads displayed.

GCCAGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATACCTTTGA  >  NC_000913/3436745‑3436929

  cAGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCAc                                                                                            >  2:8177797/1‑93 (MQ=255)

  cAGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATAGCCGCGGAAAAAATCGGCAc                                                                                            >  2:1998844/1‑93 (MQ=255)

     cTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCa                                                                                         <  2:407661/93‑1 (MQ=255)

     cTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCa                                                                                         <  2:4882263/93‑1 (MQ=255)

      tCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATTGGCACTCaa                                                                                        >  2:7005440/1‑93 (MQ=255)

       cACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAAt                                                                                       <  2:9629324/93‑1 (MQ=255)

        aCCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATc                                                                                      <  2:9917367/93‑1 (MQ=255)

         ccAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATcc                                                                                     <  1:9050348/93‑1 (MQ=255)

         ccAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATcc                                                                                     >  1:7472781/1‑93 (MQ=255)

         ccAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATcc                                                                                     <  2:6514406/93‑1 (MQ=255)

         ccAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATcc                                                                                     >  1:1357366/1‑93 (MQ=255)

          cAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCa                                                                                    >  1:368197/1‑93 (MQ=255)

          cAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCa                                                                                    >  1:6604197/1‑93 (MQ=255)

             tGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCt                                                                                 >  2:6893217/1‑93 (MQ=255)

             tGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCt                                                                                 >  2:8376213/1‑93 (MQ=255)

              gCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCtt                                                                                <  2:1573709/93‑1 (MQ=255)

              gCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCtt                                                                                >  1:2786174/1‑93 (MQ=255)

               cGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAATATAGGCACTCAATCCAGCTTg                                                                               >  2:3518543/1‑93 (MQ=255)

               cGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTg                                                                               <  2:6389344/93‑1 (MQ=255)

               cGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTg                                                                               <  1:1592145/93‑1 (MQ=255)

                gATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGt                                                                              >  1:6960426/1‑93 (MQ=255)

                 atacatacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTc                                                                             <  1:9895190/93‑1 (MQ=255)

                 atacatacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTc                                                                             >  2:7461313/1‑93 (MQ=255)

                 atacatacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTc                                                                             >  2:1025334/1‑93 (MQ=255)

                  tacatacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCg                                                                            >  2:3918309/1‑93 (MQ=255)

                      tacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGc                                                                        >  2:3049413/1‑93 (MQ=255)

                      tacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGc                                                                        >  1:3134568/1‑93 (MQ=255)

                      tacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGc                                                                        <  2:7867071/93‑1 (MQ=255)

                      tacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGACACTCAATCCAGCTTGTCGCAGc                                                                        >  2:5500289/1‑93 (MQ=255)

                       acatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCt                                                                       >  1:2498172/1‑93 (MQ=255)

                       acatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCt                                                                       >  2:2358809/1‑93 (MQ=255)

                          tacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCa                                                                    >  2:3781770/1‑93 (MQ=255)

                          tacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCa                                                                    >  1:1475220/1‑93 (MQ=255)

                          tacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCa                                                                    <  1:2307536/93‑1 (MQ=255)

                          tacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCa                                                                    <  1:331594/93‑1 (MQ=255)

                            cTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAAt                                                                  <  1:5745758/93‑1 (MQ=255)

                            cTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAAt                                                                  <  1:8160514/93‑1 (MQ=255)

                            cTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAAt                                                                  >  1:10042894/1‑93 (MQ=255)

                                     ttATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAAt                                                         >  2:1375054/1‑93 (MQ=255)

                                     ttATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAAt                                                         <  1:9525826/93‑1 (MQ=255)

                                     ttATCATTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGCAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTTAt                                                         >  2:8592454/1‑93 (MQ=255)

                                      tATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATg                                                        <  2:9261828/93‑1 (MQ=255)

                                       aTCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGa                                                       <  1:5030604/93‑1 (MQ=255)

                                         cGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACa                                                     <  1:7889328/93‑1 (MQ=255)

                                          gTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACaa                                                    >  2:3299662/1‑93 (MQ=255)

                                          gTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACaa                                                    <  1:5334721/93‑1 (MQ=255)

                                          gTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACaa                                                    <  2:2580258/93‑1 (MQ=255)

                                           ttGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAAt                                                   <  2:8844362/93‑1 (MQ=255)

                                           ttGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAAt                                                   <  2:5881108/93‑1 (MQ=255)

                                           ttGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAAt                                                   <  2:1278161/93‑1 (MQ=255)

                                             gATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCg                                                 <  2:4329099/93‑1 (MQ=255)

                                              aTTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGa                                                <  1:6067247/93‑1 (MQ=255)

                                              aTTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGa                                                >  1:4518383/1‑93 (MQ=255)

                                              aTTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGa                                                <  1:672290/93‑1 (MQ=255)

                                              aTTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGa                                                <  2:7348857/93‑1 (MQ=255)

                                               ttttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGAc                                               <  2:4739829/93‑1 (MQ=255)

                                               ttttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGAc                                               <  1:1123234/93‑1 (MQ=255)

                                               ttttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGAc                                               <  2:9106780/93‑1 (MQ=255)

                                                tttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACg                                              >  1:5444571/1‑93 (MQ=255)

                                                 ttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACgg                                             <  2:576154/93‑1 (MQ=255)

                                                   gTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCt                                           <  2:3631369/93‑1 (MQ=255)

                                                    tCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTa                                          >  2:6611743/1‑93 (MQ=255)

                                                     ccAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTaa                                         >  1:8856708/1‑93 (MQ=255)

                                                     ccAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTaa                                         >  2:6341766/1‑93 (MQ=255)

                                                      caacaaCTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAAc                                        <  2:6091960/93‑1 (MQ=255)

                                                      caacaaCTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAAc                                        >  1:2950070/1‑93 (MQ=255)

                                                      caacaaCTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAAc                                        <  2:2736712/93‑1 (MQ=255)

                                                       aacaacTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAAcc                                       <  1:4887757/93‑1 (MQ=255)

                                                        acaacTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACct                                      >  2:1719336/1‑93 (MQ=255)

                                                         caacTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACctc                                     <  2:1177603/93‑1 (MQ=255)

                                                         caacTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACctc                                     <  1:972335/93‑1 (MQ=255)

                                                           acTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCtt                                   <  2:7704228/93‑1 (MQ=255)

                                                           acTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCtt                                   >  1:7736702/1‑93 (MQ=255)

                                                             ttGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGa                                 >  2:5171663/1‑93 (MQ=255)

                                                               gTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGata                               <  1:2033689/93‑1 (MQ=255)

                                                               gTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCGTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGata                               <  1:794110/93‑1 (MQ=255)

                                                                  aGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTg                            >  2:3348845/1‑93 (MQ=255)

                                                                  aGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTg                            <  1:7161240/93‑1 (MQ=255)

                                                                   gCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGc                           >  1:3827346/1‑93 (MQ=255)

                                                                   gCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGc                           >  1:6216640/1‑93 (MQ=255)

                                                                   gCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGc                           >  2:6237638/1‑93 (MQ=255)

                                                                   gCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGc                           <  2:4144152/93‑1 (MQ=255)

                                                                    cATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCCTTAATGACAATCGACGGCAAACCTCTTGatatgcgg                          >  2:1839809/1‑89 (MQ=255)

                                                                     aTAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCgg                         >  1:4219141/1‑93 (MQ=255)

                                                                      tAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGa                        >  1:46891/1‑93 (MQ=255)

                                                                      tAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGa                        >  2:2887894/1‑93 (MQ=255)

                                                                      tAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGa                        >  2:6707708/1‑93 (MQ=255)

                                                                            ccgcGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCg                  <  2:321259/93‑1 (MQ=255)

                                                                             cgcgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGGTCATCGt                 >  1:266642/1‑93 (MQ=255)

                                                                             cgcgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGt                 >  1:6476912/1‑93 (MQ=255)

                                                                             cgcgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGt                 <  2:2431112/93‑1 (MQ=255)

                                                                              gcgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTg                >  1:6357595/1‑93 (MQ=255)

                                                                              gcgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTg                <  1:9166034/93‑1 (MQ=255)

                                                                               cgTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGa               >  1:3982948/1‑93 (MQ=255)

                                                                                 tAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACg             <  1:8549468/93‑1 (MQ=255)

                                                                                    aaaaTCGGCACTAAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGTCAATCGACGGCTAACCTCTTTATATTTCGGATCATCGTGACGGAt          >  2:7235782/1‑93 (MQ=255)

                                                                                     aaaTCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATa         >  2:4443485/1‑93 (MQ=255)

                                                                                      aaTCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATAc        >  1:9328742/1‑93 (MQ=255)

                                                                                         cGGCACTCAAGCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTACCCTCTTGATATTGCGGATCATCGTGACGGATACCtt     <  1:1735617/93‑1 (MQ=255)

                                                                                            tACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATACCTTTga  <  1:8341567/93‑1 (MQ=255)

GCCAGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATACCTTTGA  >  NC_000913/3436745‑3436929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`