| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,941,090 | 0 | T | C | 70.0% | 175.7 / 199.5 | 237 | noncoding (34/76 nt) | gltU | tRNA‑Val |
| Reads supporting (aligned to +/- strand): ref base T (51/20); new base C (90/76); total (141/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.40e-03 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 277 total aligned reads displayed.
ACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAT > NC_000913/3941000‑3941182 | acacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCctt < 2:184629/93‑1 (MQ=18)acacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCctt < 1:6981502/93‑1 (MQ=18)acacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCctt < 1:2605071/93‑1 (MQ=18) cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTc < 2:2051435/93‑1 (MQ=18) cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTc > 1:1939204/1‑93 (MQ=21) cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTc > 2:4796927/1‑93 (MQ=18) cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTc < 2:5179830/93‑1 (MQ=18) acaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCa < 1:1880097/93‑1 (MQ=18) acaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCa < 2:7307584/93‑1 (MQ=18) caGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAc < 2:6469732/93‑1 (MQ=18) caGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAc > 2:2485569/1‑93 (MQ=21) gATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcgg > 2:1224921/1‑93 (MQ=21) aTTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcggc < 1:526938/93‑1 (MQ=18) ttGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcggcg < 2:365248/93‑1 (MQ=18) tGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcggcgg > 2:7225822/1‑93 (MQ=21) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGt > 2:3696361/1‑93 (MQ=21) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGt < 1:4586804/93‑1 (MQ=18) tCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGTGGCCCAGGACACCGCCCCTTCACGGCGGTa > 2:2133773/1‑93 (MQ=16) tCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTa > 2:8131902/1‑93 (MQ=18) cTGATAGGAGGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTaa < 1:7623295/93‑1 (MQ=255) cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTaa < 2:6627946/93‑1 (MQ=18) cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTaa < 2:2879873/93‑1 (MQ=18) cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCACCCCTTCACGGCGGTaa < 1:2335347/93‑1 (MQ=255) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 2:9025213/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 1:3410818/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 1:6574938/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 2:2633110/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGAGGGAAc > 2:5826146/1‑93 (MQ=255) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACa < 1:5742382/93‑1 (MQ=18) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACa < 1:1788233/93‑1 (MQ=18) aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAg < 2:8693106/93‑1 (MQ=18) aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAg < 2:6203110/93‑1 (MQ=18) tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgg < 2:2768534/93‑1 (MQ=18) tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgg > 2:805409/1‑93 (MQ=18) tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgg < 1:7036922/93‑1 (MQ=18) tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgg > 1:1112079/1‑93 (MQ=18) tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgg > 2:6643541/1‑93 (MQ=18) aaGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgg < 1:7840759/92‑1 (MQ=16) aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAggg > 1:8222920/1‑93 (MQ=18) aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAggg > 1:3313314/1‑93 (MQ=18) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgggg > 1:285604/1‑93 (MQ=17) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgggg > 2:3734729/1‑93 (MQ=17) gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAGGGGt > 1:9976351/1‑93 (MQ=14) gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAGGGGt < 2:1519707/93‑1 (MQ=14) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 2:3247556/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 2:8096388/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 2:9572817/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:9688177/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:2451558/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:3134479/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 2:9119042/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:4011336/1‑93 (MQ=31) aGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:544749/1‑93 (MQ=31) aGGACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:9354067/1‑93 (MQ=14) aGGACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:7150812/1‑93 (MQ=14) aGGACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat > 1:5513497/1‑93 (MQ=14) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 2:7550764/1‑93 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc < 1:1281009/93‑1 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 2:4605369/1‑93 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc < 1:4175553/93‑1 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 2:3413311/1‑93 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc < 1:8495532/93‑1 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc < 2:8351603/93‑1 (MQ=32) ggACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 2:4073594/1‑93 (MQ=17) ggACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 1:2995753/1‑93 (MQ=17) ggACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGCGAAAGTCACCTGCCTTAATAtc < 2:6404328/93‑1 (MQ=12) gACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtct < 2:9316934/93‑1 (MQ=18) acacCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtctc > 2:4658235/1‑93 (MQ=34) acacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtctc < 2:5485860/93‑1 (MQ=21) acacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCAGCCTTAATAtctc < 1:3166595/93‑1 (MQ=255) cacCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGGCGCCCCCTTGTGGTTTTGGGAGTGAAAGTCACTTCCCTTATTAtcta > 1:8624222/1‑92 (MQ=11) cacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCa > 1:3575192/1‑93 (MQ=25) cacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCa < 1:7401355/93‑1 (MQ=25) cacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCa < 1:56572/93‑1 (MQ=25) cacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCa < 2:7989954/93‑1 (MQ=25) acCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa > 1:6425819/1‑93 (MQ=25) acCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa < 2:1006570/93‑1 (MQ=25) acCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa < 2:5991146/93‑1 (MQ=25) ccGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa > 2:9888042/1‑93 (MQ=35) ccGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa < 1:3270131/93‑1 (MQ=35) ccGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa < 2:4977330/93‑1 (MQ=25) ccGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa < 1:3550993/93‑1 (MQ=25) ccGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa < 2:1777322/93‑1 (MQ=25) ccGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa > 2:8736858/1‑93 (MQ=25) cGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa > 1:4391194/1‑93 (MQ=35) gCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCCAAAc > 1:1012349/1‑93 (MQ=25) gCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc < 2:8418060/93‑1 (MQ=25) ccccTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 2:5316311/1‑93 (MQ=25) ccccTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 1:8887461/1‑93 (MQ=25) ccccTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 2:8764982/1‑93 (MQ=25) cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 2:5779028/1‑93 (MQ=35) cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGGTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 1:3729895/1‑93 (MQ=25) ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTc > 2:5670944/1‑93 (MQ=35) cTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa > 1:4717184/1‑93 (MQ=35) cTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa > 2:3039652/1‑93 (MQ=35) cTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa > 2:3943301/1‑93 (MQ=35) cTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa < 1:1029883/93‑1 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt > 2:893437/1‑93 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt > 2:1592372/1‑93 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt > 2:6848670/1‑93 (MQ=35) | ACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACG‑CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAT > NC_000913/3941000‑3941182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |