Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,768,519 T→C D163G (GAC→GGC)  yibH ← putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,768,5190TC95.1% 1340.1 / 39.7 469D163G (GAC→GGC) yibHputative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (7/16);  new base C (194/252);  total (201/268)
Fisher's exact test for biased strand distribution p-value = 2.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01

Only 100 of 480 total aligned reads displayed.

TCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC  >  NC_000913/3768429‑3768608
                                                                                          |                                                                                         
tCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCa                                                                                         <  1:7481183/93‑1 (MQ=255)
  gAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCGCCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACg                                                                                       <  1:5283022/93‑1 (MQ=255)
  gAGCTGGCTCTGGAGCTGCGCCCGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACg                                                                                       <  2:2813803/93‑1 (MQ=255)
   aGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGt                                                                                      <  1:7096942/93‑1 (MQ=255)
    gCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGtt                                                                                     >  2:1835827/1‑93 (MQ=255)
      tGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTcc                                                                                   >  1:8509866/1‑93 (MQ=255)
        gCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCga                                                                                 <  1:6925559/93‑1 (MQ=255)
         ctctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgag                                                                                >  2:3740853/1‑93 (MQ=255)
          tctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgaga                                                                               <  1:2712866/93‑1 (MQ=255)
          tctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgaga                                                                               <  2:5375695/93‑1 (MQ=255)
           ctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGaa                                                                              >  2:8411890/1‑93 (MQ=255)
           ctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGaa                                                                              >  1:8855833/1‑93 (MQ=255)
           ctGGATCTGCGCCGGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGaa                                                                              <  1:6779937/93‑1 (MQ=255)
            tGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgagacg                                                                             >  1:3601014/1‑91 (MQ=255)
            tGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAAc                                                                             >  2:9142698/1‑93 (MQ=255)
            tGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAAc                                                                             <  2:308230/93‑1 (MQ=255)
             ggATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACg                                                                            >  2:6509963/1‑93 (MQ=255)
              gATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACgg                                                                           <  1:317855/93‑1 (MQ=255)
               aTCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGa                                                                          <  1:9083626/93‑1 (MQ=255)
                tCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGAt                                                                         <  2:5497194/93‑1 (MQ=255)
                 cTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGAtt                                                                        <  2:8248010/93‑1 (MQ=255)
                 cTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGAtt                                                                        <  1:7373441/93‑1 (MQ=255)
                  tGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTc                                                                       >  2:1667181/1‑93 (MQ=255)
                    cgcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCaa                                                                     >  2:7759906/1‑92 (MQ=255)
                    cgcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAc                                                                     <  1:451240/93‑1 (MQ=255)
                    cgcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAc                                                                     <  1:3725512/93‑1 (MQ=255)
                     gcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAcc                                                                    <  2:9325932/93‑1 (MQ=255)
                     gcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAcc                                                                    <  1:5976551/93‑1 (MQ=255)
                      ccTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccg                                                                   <  1:195359/93‑1 (MQ=255)
                       cTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccgc                                                                  >  1:1504698/1‑93 (MQ=255)
                        tGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccgcc                                                                 <  2:462904/93‑1 (MQ=255)
                        tGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccgcc                                                                 >  2:8070517/1‑93 (MQ=255)
                         gCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCAccgccg                                                                <  1:1152932/93‑1 (MQ=255)
                           tCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              <  2:4242559/93‑1 (MQ=255)
                           tCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              >  1:5330336/1‑93 (MQ=255)
                           tCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              <  2:6194745/93‑1 (MQ=255)
                           cccGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              <  1:3467048/92‑1 (MQ=255)
                              gCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTgg                                                           >  1:7793440/1‑93 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  2:8661837/93‑1 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  2:4383598/93‑1 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  2:126743/93‑1 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  1:3956444/93‑1 (MQ=255)
                                cACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCt                                                         >  1:9188128/1‑93 (MQ=255)
                                 aCCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTg                                                        >  1:4719214/1‑93 (MQ=255)
                                   cGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGcc                                                      >  1:4894043/1‑93 (MQ=255)
                                    gAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCt                                                     <  1:6551502/93‑1 (MQ=255)
                                    gAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCt                                                     <  1:5510367/93‑1 (MQ=255)
                                      gCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCttt                                                   >  2:9810440/1‑93 (MQ=255)
                                      gCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCttt                                                   >  1:3323745/1‑93 (MQ=255)
                                      gCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCCGGCTGCCttt                                                   >  2:2230109/1‑93 (MQ=255)
                                       ccTTTCCCCAGCACAACCTGCGCGAGGCAGTTTTGCCGCGCATAGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTATc                                                  <  2:8950503/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  <  1:4222580/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  <  1:8401767/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  <  2:2481243/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  >  2:4808423/1‑93 (MQ=255)
                                         tttCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCaa                                                <  2:7511012/93‑1 (MQ=255)
                                          ttCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAg                                               <  1:221438/93‑1 (MQ=255)
                                          ttCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAg                                               <  2:57028/93‑1 (MQ=255)
                                           tCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGt                                              <  2:7215679/93‑1 (MQ=255)
                                           tCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGt                                              >  2:2040536/1‑93 (MQ=255)
                                              ccAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTGACCGCCGCCTGGCTGCCTTTCAAGTAAc                                           <  1:6407988/93‑1 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          <  2:9583853/93‑1 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          >  2:7130699/1‑93 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          >  2:8881361/1‑93 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          <  2:1135943/93‑1 (MQ=255)
                                                aGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGt                                         >  2:3962845/1‑93 (MQ=255)
                                                 gcgcATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGtt                                        <  1:8616536/93‑1 (MQ=255)
                                                    cATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGAt                                     >  1:7971995/1‑93 (MQ=255)
                                                     aTCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATa                                    <  2:361553/93‑1 (MQ=255)
                                                      tCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATaa                                   <  2:10029971/93‑1 (MQ=255)
                                                        cTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCTAGTTACGTTGATAAtt                                 >  2:4567371/1‑93 (MQ=255)
                                                         tGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttt                                >  1:2453973/1‑93 (MQ=255)
                                                         tGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttt                                <  2:5150530/93‑1 (MQ=255)
                                                         tGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttt                                >  2:2705911/1‑93 (MQ=255)
                                                           cgcgAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttttt                              >  1:606778/1‑93 (MQ=255)
                                                            gcgAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTa                             <  2:8151058/93‑1 (MQ=255)
                                                             cgAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaa                            >  2:1421170/1‑93 (MQ=255)
                                                             cgAGCAAATTTTGCCGCGCATCGGCGATCCCACGTTCCGAGAACGGATGCACCGCCCCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaa                            <  1:7235832/93‑1 (MQ=255)
                                                              gAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaaa                           >  1:1769617/1‑93 (MQ=255)
                                                              gAGGAAATTGTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaaa                           <  1:2564423/93‑1 (MQ=255)
                                                               aGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAc                          <  2:5769097/93‑1 (MQ=255)
                                                               aGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAc                          <  1:2132392/93‑1 (MQ=255)
                                                               aGGAAATTTTGCAGGGCATTGACGATGACACGGTCCGGGAACGGATTCACCGCCGCCGGGGTGGCTTTCCAGTAAAGTTGATAAATTTTaaaa                          >  2:5998677/1‑92 (MQ=255)
                                                                ggAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACa                         <  1:831068/93‑1 (MQ=255)
                                                                ggAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACa                         <  2:3304506/93‑1 (MQ=255)
                                                                ggAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCATTTCAAGTAACGTTGATAATTTTTAAACa                         <  1:8934577/93‑1 (MQ=255)
                                                                   aaTTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTTACGTTGATAATTTTTAAACCGAc                      >  2:6089595/1‑93 (MQ=255)
                                                                     ttttGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACgg                    <  1:8081945/93‑1 (MQ=255)
                                                                       ttGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTc                  <  1:4829442/93‑1 (MQ=255)
                                                                          ccGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTcgcg               >  2:2957146/1‑93 (MQ=255)
                                                                           cgcgCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTCACGTTGATAATTTTTAAAAAGACGGTCgcgc              >  1:971448/1‑93 (MQ=255)
                                                                           cgcgCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCgcgc              >  2:7686351/1‑93 (MQ=255)
                                                                           cgcgCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCgcgc              >  2:6999661/1‑93 (MQ=255)
                                                                            gcgcATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCt             >  2:6308885/1‑93 (MQ=255)
                                                                                aTCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGc         >  1:4995950/1‑93 (MQ=255)
                                                                                aTCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGc         >  1:6219139/1‑93 (MQ=255)
                                                                                 tcgtcgATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCt        >  1:5684986/1‑93 (MQ=255)
                                                                                  cgtcgATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTg       >  2:2615336/1‑93 (MQ=255)
                                                                                    tcgATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGaa     >  1:1013362/1‑93 (MQ=255)
                                                                                      gATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAAc   <  1:9336848/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC  >  NC_000913/3768429‑3768608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: