BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,800,657	T→C	E10G (GAG→GGG)	rfaI ←	UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,800,657	0	T	C	100.0%	2476.8 / NA	749	E10G (GAG→GGG)	rfaI	UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (397/352); total (397/352)

Only 100 of 756 total aligned reads displayed.

AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT  >  NC_000913/3800567‑3800746

aGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCa                                                                                         <  1:666248/93‑1 (MQ=255)

aGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCa                                                                                         >  2:9660205/1‑93 (MQ=255)

 gAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAg                                                                                        >  1:109872/1‑93 (MQ=255)

 gAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAg                                                                                        <  1:1461958/93‑1 (MQ=255)

 aaaaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAg                                                                                        <  1:1802322/92‑1 (MQ=255)

  aaaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGt                                                                                       >  1:10000448/1‑93 (MQ=255)

  aaaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGt                                                                                       <  1:8614472/93‑1 (MQ=255)

   aaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGtt                                                                                      >  1:3281077/1‑93 (MQ=255)

    aGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGttt                                                                                     <  2:4313844/93‑1 (MQ=255)

     gTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTc                                                                                    <  1:6447329/93‑1 (MQ=255)

          tGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGa                                                                               <  1:6933880/93‑1 (MQ=255)

            tCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaa                                                                             >  1:6039298/1‑93 (MQ=255)

              aGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaaaa                                                                           <  2:8810296/93‑1 (MQ=255)

                 tCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAacac                                                                        <  1:3116676/93‑1 (MQ=255)

                 tCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAacac                                                                        <  2:2205638/93‑1 (MQ=255)

                 tCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAacac                                                                        <  2:547500/93‑1 (MQ=255)

                 tCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAacac                                                                        >  1:2193637/1‑93 (MQ=255)

                   cATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACct                                                                      <  2:3749119/93‑1 (MQ=255)

                     tAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgc                                                                    >  2:478805/1‑93 (MQ=255)

                     tAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgc                                                                    >  1:4269531/1‑93 (MQ=255)

                     tAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgc                                                                    >  2:6472395/1‑93 (MQ=255)

                     tAAGCGATGTCCAGAAAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgc                                                                    >  2:8622727/1‑93 (MQ=255)

                          gATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCat                                                               >  1:7873612/1‑93 (MQ=255)

                           aTGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCatt                                                              >  1:3668128/1‑93 (MQ=255)

                           aTGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCatt                                                              <  2:6619718/93‑1 (MQ=255)

                            tGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCatta                                                             <  2:4048696/93‑1 (MQ=255)

                            tGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCatta                                                             >  1:1306091/1‑93 (MQ=255)

                                cAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtc                                                         <  2:5585193/93‑1 (MQ=255)

                                cAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtc                                                         <  1:8241380/93‑1 (MQ=255)

                                  gACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcct                                                       >  1:5562807/1‑93 (MQ=255)

                                   aCAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctc                                                      >  1:7155329/1‑93 (MQ=255)

                                     aaaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCg                                                    >  1:7400159/1‑93 (MQ=255)

                                     aaaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCg                                                    >  2:7756620/1‑93 (MQ=255)

                                     aaaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCg                                                    >  2:5735003/1‑93 (MQ=255)

                                       aGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCggg                                                  >  2:3884212/1‑93 (MQ=255)

                                         aTTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGaa                                                >  2:3113425/1‑93 (MQ=255)

                                         aTTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGaa                                                >  1:9383872/1‑93 (MQ=255)

                                         aTTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGaa                                                <  2:5058462/93‑1 (MQ=255)

                                         aTTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAAACCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCAGGGaa                                                >  1:9114275/1‑93 (MQ=255)

                                          ttttCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGaaa                                               >  2:1016947/1‑93 (MQ=255)

                                           tttCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAAt                                              <  1:2373900/93‑1 (MQ=255)

                                            ttCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATa                                             <  2:2807766/93‑1 (MQ=255)

                                               tGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCa                                          <  1:4564711/93‑1 (MQ=255)

                                               tGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCa                                          >  1:2720992/1‑93 (MQ=255)

                                                 tttCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGa                                        <  1:900102/93‑1 (MQ=255)

                                                 tttCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGa                                        <  1:6386374/93‑1 (MQ=255)

                                                  ttCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaa                                       >  1:4107190/1‑93 (MQ=255)

                                                   tCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaaa                                      >  1:5061895/1‑93 (MQ=255)

                                                    cTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaat                                     <  2:3573810/93‑1 (MQ=255)

                                                      aCTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataa                                   >  2:7256883/1‑93 (MQ=255)

                                                       atttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataat                                  <  1:9236386/92‑1 (MQ=255)

                                                        tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt                                 >  2:2682044/1‑93 (MQ=255)

                                                        tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt                                 <  2:1989017/93‑1 (MQ=255)

                                                         ttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTa                                >  2:8496164/1‑93 (MQ=255)

                                                         ttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTa                                >  1:6174528/1‑93 (MQ=255)

                                                         ttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTa                                >  1:7557736/1‑93 (MQ=255)

                                                           aTGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAcc                              <  2:8395606/93‑1 (MQ=255)

                                                            tGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCATAAATACTTAACt                             >  1:4882020/1‑93 (MQ=255)

                                                            tGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCt                             >  1:4726959/1‑93 (MQ=255)

                                                             gATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCtt                            >  2:7604789/1‑93 (MQ=255)

                                                             gATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCtt                            <  2:2970983/93‑1 (MQ=255)

                                                              aTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTa                           <  2:9818235/93‑1 (MQ=255)

                                                              aTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTa                           <  1:7976075/93‑1 (MQ=255)

                                                               tCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAt                          >  2:8921263/1‑93 (MQ=255)

                                                               tCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAt                          >  2:7053509/1‑93 (MQ=255)

                                                                cATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATg                         >  2:4147338/1‑93 (MQ=255)

                                                                cATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATg                         <  1:2847541/93‑1 (MQ=255)

                                                                 aTAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGt                        <  1:582597/93‑1 (MQ=255)

                                                                  tAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTa                       <  2:9123687/93‑1 (MQ=255)

                                                                  tAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTa                       <  2:8230818/93‑1 (MQ=255)

                                                                  tAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTa                       >  2:4924151/1‑93 (MQ=255)

                                                                  tAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTa                       >  2:1762017/1‑93 (MQ=255)

                                                                    aTCAATAACTGAATTAAGAAACCCAGTTTCGTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGAATAAATAATTCCCTTATGTAAt                     >  1:1400776/1‑93 (MQ=255)

                                                                    aTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAAt                     >  1:1640115/1‑93 (MQ=255)

                                                                    aTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAAt                     >  2:5208373/1‑93 (MQ=255)

                                                                    aTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAAt                     <  2:5920727/93‑1 (MQ=255)

                                                                    aTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAAt                     <  2:2540233/93‑1 (MQ=255)

                                                                      cAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCt                   <  2:1459762/93‑1 (MQ=255)

                                                                      cAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCt                   >  2:2401738/1‑93 (MQ=255)

                                                                      cAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCt                   >  1:819136/1‑93 (MQ=255)

                                                                       aaTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTa                  >  1:2485170/1‑93 (MQ=255)

                                                                        aTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAt                 <  1:991349/93‑1 (MQ=255)

                                                                        aTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAt                 >  2:7381465/1‑93 (MQ=255)

                                                                          aaCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCg               <  1:9613183/93‑1 (MQ=255)

                                                                           aCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGt              <  1:389566/93‑1 (MQ=255)

                                                                            cTGTATTAAGAAGCCCACTTTCCGGGAAAAACACCTGCTGCATTATTACCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTa             <  2:1307939/93‑1 (MQ=255)

                                                                            cTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTa             <  1:6836338/93‑1 (MQ=255)

                                                                               aaTTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATa          <  1:8485018/93‑1 (MQ=255)

                                                                               aaTTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATa          <  1:2016375/93‑1 (MQ=255)

                                                                                aTTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATAc         >  1:772746/1‑93 (MQ=255)

                                                                                 ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATGATTACCTTATGTAATCTATCGTAATACt        <  2:9285318/93‑1 (MQ=255)

                                                                                 ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACt        >  2:686059/1‑93 (MQ=255)

                                                                                 ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACt        >  1:4428771/1‑93 (MQ=255)

                                                                                 ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACt        >  2:4611357/1‑93 (MQ=255)

                                                                                  tAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACtt       <  2:4396796/93‑1 (MQ=255)

                                                                                   aaGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTc      <  2:1513774/93‑1 (MQ=255)

                                                                                   aaGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTc      >  1:5378265/1‑93 (MQ=255)

                                                                                   aaGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTc      <  2:6329312/93‑1 (MQ=255)

                                                                                    aGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCg     >  1:8734139/1‑93 (MQ=255)

                                                                                      aaaCCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGAt   <  2:9529372/93‑1 (MQ=255)

AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT  >  NC_000913/3800567‑3800746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`