Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,858,839 C→T intergenic (+36/+137) yidL → / ← glvG putative ARAC‑type regulatory protein/putative 6‑phospho‑beta‑glucosidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,858,8390CT99.8% 1721.9 / ‑5.8 479intergenic (+36/+137)yidL/glvGputative ARAC‑type regulatory protein/putative 6‑phospho‑beta‑glucosidase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (229/249);  total (229/250)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.08e-01

Only 100 of 486 total aligned reads displayed.

AGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGCAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTG  >  NC_000913/3858749‑3858928
                                                                                          |                                                                                         
 gCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAAc                                                                                        >  2:7751759/1‑93 (MQ=255)
  ccGTGCTAAAGAATACGGACCAGCACCCAACGGATGGCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTTGCCTCCAGTAACt                                                                                       >  2:5689016/1‑93 (MQ=255)
  ccGGGCTAAAGAATACGGACCCGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTGGGCCTCCAGTAACt                                                                                       >  2:4489537/1‑93 (MQ=255)
   cGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTc                                                                                      >  2:1659625/1‑93 (MQ=255)
     tGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCAt                                                                                    >  2:8573180/1‑93 (MQ=255)
      gCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATc                                                                                   >  1:7324179/1‑93 (MQ=255)
      gCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATc                                                                                   >  2:9050443/1‑93 (MQ=255)
      gCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATc                                                                                   >  1:8455866/1‑93 (MQ=255)
        tAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCa                                                                                 >  1:10041701/1‑93 (MQ=255)
        tAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCa                                                                                 >  2:4253716/1‑93 (MQ=255)
         aaaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAg                                                                                >  2:8471634/1‑93 (MQ=255)
         aaaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAg                                                                                >  2:2045697/1‑93 (MQ=255)
         aaaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAg                                                                                >  1:2340499/1‑93 (MQ=255)
         aaaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAg                                                                                >  1:3852538/1‑93 (MQ=255)
           aGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGaa                                                                              >  2:7265209/1‑93 (MQ=255)
           aGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTGTGTTGGCCTCCAGTAACTCATCCAGaa                                                                              >  1:1495324/1‑93 (MQ=255)
             aaTACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATa                                                                            <  1:2977164/93‑1 (MQ=255)
             aaTACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATa                                                                            <  1:2467440/93‑1 (MQ=255)
              aTACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAg                                                                           <  2:6740962/93‑1 (MQ=255)
                aCGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCt                                                                         >  2:2378969/1‑93 (MQ=255)
                 cGGACCAGCCCCCAACGGATGCCAGTCCACACAATTAACGTAGCTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCtt                                                                        <  1:7682433/93‑1 (MQ=255)
                 cGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCtt                                                                        <  2:9311648/93‑1 (MQ=255)
                  ggACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCttt                                                                       <  2:2584576/93‑1 (MQ=255)
                  ggACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCttt                                                                       >  1:8703599/1‑93 (MQ=255)
                     ccAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGc                                                                    <  2:9508656/93‑1 (MQ=255)
                     ccAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGc                                                                    >  2:4680447/1‑93 (MQ=255)
                        gCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGAc                                                                 >  2:3231855/1‑93 (MQ=255)
                        gCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGAc                                                                 >  1:1243724/1‑93 (MQ=255)
                        gCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGAc                                                                 <  2:9409894/93‑1 (MQ=255)
                        gCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGAc                                                                 >  1:4195403/1‑93 (MQ=255)
                        gCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGAc                                                                 >  2:6465690/1‑93 (MQ=255)
                          aCCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCg                                                               >  1:5741274/1‑93 (MQ=255)
                           cccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGa                                                              >  1:7598713/1‑93 (MQ=255)
                           cccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGa                                                              >  2:5425757/1‑93 (MQ=255)
                            ccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAg                                                             >  1:3741613/1‑93 (MQ=255)
                            ccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAg                                                             >  1:9197430/1‑93 (MQ=255)
                              aaCGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGgc                                                           >  2:3077235/1‑93 (MQ=255)
                              aaCGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGgc                                                           >  1:5431363/1‑93 (MQ=255)
                               aCGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGgcg                                                          >  2:1143628/1‑93 (MQ=255)
                                  gATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTc                                                       <  1:4568200/93‑1 (MQ=255)
                                   aTGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCg                                                      >  2:3613368/1‑93 (MQ=255)
                                   aTGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCg                                                      <  1:4481742/93‑1 (MQ=255)
                                   aTGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCg                                                      >  1:8247659/1‑93 (MQ=255)
                                       cAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAc                                                  <  1:4980076/93‑1 (MQ=255)
                                       cAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAc                                                  <  1:2880443/93‑1 (MQ=255)
                                        aGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAcc                                                 >  2:8419722/1‑93 (MQ=255)
                                          tCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGt                                               >  2:4334687/1‑93 (MQ=255)
                                           ccACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGtt                                              >  2:10005857/1‑93 (MQ=255)
                                            cacacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTATCGttt                                             >  2:7052036/1‑93 (MQ=255)
                                            cacacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGttt                                             >  2:687650/1‑93 (MQ=255)
                                            cacacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGttt                                             >  2:8116797/1‑93 (MQ=255)
                                             acacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGtttt                                            <  2:6592986/93‑1 (MQ=255)
                                             acacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGtttt                                            <  1:8057618/93‑1 (MQ=255)
                                              cacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTc                                           >  1:3425195/1‑93 (MQ=255)
                                                caATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGa                                         >  2:682752/1‑93 (MQ=255)
                                                  aTTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACa                                       >  2:7453560/1‑93 (MQ=255)
                                                  aTTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACa                                       <  2:3425466/93‑1 (MQ=255)
                                                  aTTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACa                                       >  2:6018697/1‑93 (MQ=255)
                                                    tAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAc                                     <  1:6815844/93‑1 (MQ=255)
                                                      aCGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGt                                   >  2:6324921/1‑93 (MQ=255)
                                                       cGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTa                                  >  1:7907100/1‑93 (MQ=255)
                                                        gTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTaa                                 >  1:2172755/1‑93 (MQ=255)
                                                        gTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTaa                                 <  2:971047/93‑1 (MQ=255)
                                                        gTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTaa                                 >  1:9081360/1‑93 (MQ=255)
                                                         tAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAAt                                <  1:6680392/93‑1 (MQ=255)
                                                         tAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAAt                                <  2:3851434/93‑1 (MQ=255)
                                                            ctctGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGc                             <  2:5936623/93‑1 (MQ=255)
                                                             tctGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGcc                            <  2:481708/93‑1 (MQ=255)
                                                             tctGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGcc                            <  1:5971118/93‑1 (MQ=255)
                                                              ctGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCt                           <  2:1753907/93‑1 (MQ=255)
                                                              ctGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCt                           >  2:8286712/1‑93 (MQ=255)
                                                                  ccAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCca                       >  2:6197996/1‑93 (MQ=255)
                                                                    aGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCcaca                     <  1:9674045/93‑1 (MQ=255)
                                                                    aGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCcaca                     <  1:4046560/93‑1 (MQ=255)
                                                                     gTACGCTTTGTTGGCCTCCAGTATCTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAg                    <  2:5518704/93‑1 (MQ=255)
                                                                     gTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAg                    <  1:6318703/93‑1 (MQ=255)
                                                                     gTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAg                    >  2:3974644/1‑93 (MQ=255)
                                                                       aCGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGt                  <  2:5138609/93‑1 (MQ=255)
                                                                        cGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTg                 >  2:7298320/1‑93 (MQ=255)
                                                                        cGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTg                 <  1:7536745/93‑1 (MQ=255)
                                                                         gCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGc                <  1:6193002/93‑1 (MQ=255)
                                                                         gCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGc                >  1:9492233/1‑93 (MQ=255)
                                                                          cTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCt               >  1:1587237/1‑93 (MQ=255)
                                                                           tttGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTg              >  2:9843909/1‑93 (MQ=255)
                                                                            ttgttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGa             >  1:5523682/1‑93 (MQ=255)
                                                                            ttgttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGa             >  2:2194102/1‑93 (MQ=255)
                                                                            ttgttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGa             <  1:8892064/93‑1 (MQ=255)
                                                                            ttgttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGa             >  1:9392115/1‑93 (MQ=255)
                                                                              gttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGata           <  1:6426213/93‑1 (MQ=255)
                                                                                tgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATg         >  1:7169290/1‑93 (MQ=255)
                                                                                 ggCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGa        >  2:2855494/1‑93 (MQ=255)
                                                                                 ggCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGa        <  1:3241181/93‑1 (MQ=255)
                                                                                  gCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGaa       <  1:4395665/93‑1 (MQ=255)
                                                                                    cTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGACCg     >  1:3339642/1‑93 (MQ=255)
                                                                                    cTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACg     >  1:3485137/1‑93 (MQ=255)
                                                                                     tCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGc    <  1:2828007/93‑1 (MQ=255)
                                                                                     tCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGc    <  1:2045011/93‑1 (MQ=255)
                                                                                      ccAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCt   <  1:179407/93‑1 (MQ=255)
                                                                                      ccAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCt   <  2:1550559/93‑1 (MQ=255)
                                                                                       cAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTg  <  1:8610627/93‑1 (MQ=255)
                                                                                          |                                                                                         
AGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGCAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTG  >  NC_000913/3858749‑3858928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: