Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,893,993 A→G A82A (GCT→GCC yieG ← putative membrane/transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,893,9930AG99.8% 1480.1 / ‑5.3 452A82A (GCT→GCCyieGputative membrane/transport protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (231/220);  total (232/220)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.13e-01

Only 100 of 471 total aligned reads displayed.

GACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCGCTGGTATCCATGCCAGCAACGCCAAG  >  NC_000913/3893903‑3894082
                                                                                          |                                                                                         
gACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGc                                                                                         >  1:5622705/1‑93 (MQ=255)
 aCCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCa                                                                                        <  1:3388988/93‑1 (MQ=255)
   cTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCaaa                                                                                      >  1:8522383/1‑93 (MQ=255)
   cTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCaaa                                                                                      >  1:2844328/1‑93 (MQ=255)
   cTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCaaa                                                                                      >  1:2614168/1‑93 (MQ=255)
    tGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAAc                                                                                     >  2:1086872/1‑93 (MQ=255)
      ccACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAg                                                                                   >  2:4717132/1‑93 (MQ=255)
      ccACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAg                                                                                   <  2:9199330/93‑1 (MQ=255)
        aCGGCAAGCCCATCGCTTGTACAATGACAGAAGCGAAGAACGCATTCAGGCCCATAGCGTGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTc                                                                                 <  1:5577034/93‑1 (MQ=255)
        aCGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTc                                                                                 <  2:6465636/93‑1 (MQ=255)
        aCGGCAAGCACATCGCCTGTACAAGGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTc                                                                                 <  1:4871926/93‑1 (MQ=255)
          gtcAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTccc                                                                               >  1:7973347/3‑93 (MQ=255)
           gCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCca                                                                              >  1:7102049/1‑93 (MQ=255)
             aaGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCcatc                                                                            <  1:5767159/93‑1 (MQ=255)
              aGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACCGTCCcatca                                                                           >  2:2584398/1‑93 (MQ=255)
              aGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCcatca                                                                           >  2:5670686/1‑93 (MQ=255)
              aGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCcatca                                                                           <  1:3594729/93‑1 (MQ=255)
               ccccATCGCCTGAACAACAAAAAAAGCAAAGAACGCATTCAGGCCCATGGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCcatcat                                                                          <  2:6599336/92‑1 (MQ=255)
                 ccATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCataa                                                                        >  1:4701415/1‑93 (MQ=255)
                  cATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCataat                                                                       >  2:4399845/1‑93 (MQ=255)
                  cATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCataat                                                                       >  2:3310700/1‑93 (MQ=255)
                   aTCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCataata                                                                      >  1:10009714/1‑93 (MQ=255)
                     cGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACt                                                                    <  2:3232193/93‑1 (MQ=255)
                      gCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTg                                                                   >  2:2405911/1‑93 (MQ=255)
                        cTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGcc                                                                 <  1:2544731/93‑1 (MQ=255)
                        cTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGcc                                                                 <  2:3536848/93‑1 (MQ=255)
                         tGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCg                                                                >  1:965718/1‑93 (MQ=255)
                           tACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGaa                                                              <  1:4356137/93‑1 (MQ=255)
                            aCAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAAt                                                             <  2:377451/93‑1 (MQ=255)
                            aCAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAAt                                                             >  2:4091853/1‑93 (MQ=255)
                             cAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATg                                                            <  1:7745333/93‑1 (MQ=255)
                               aCGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCa                                                          <  1:1670806/93‑1 (MQ=255)
                               aCGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGACAAACAGTCCCATCATAATACTGCCGAATGCa                                                          <  1:5937765/93‑1 (MQ=255)
                                cGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAACCAGTCCCATCATAATACTGCCGAATGCAg                                                         <  2:2105928/93‑1 (MQ=255)
                                 gACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGc                                                        <  1:3734894/93‑1 (MQ=255)
                                   cAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGa                                                      >  2:5260286/1‑93 (MQ=255)
                                    aaaaGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACATTCCCATCATAATACTGCCGAATGCAGCGAt                                                     <  1:8862014/93‑1 (MQ=255)
                                    aaaaGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGAt                                                     <  1:657460/93‑1 (MQ=255)
                                    aaaaGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGAt                                                     >  1:3081258/1‑93 (MQ=255)
                                    aaaaGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGAt                                                     <  2:7204746/93‑1 (MQ=255)
                                    aaaaGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGAt                                                     >  2:6148917/1‑93 (MQ=255)
                                       aGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAg                                                  <  2:2302769/93‑1 (MQ=255)
                                        gCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGa                                                 <  2:7032763/93‑1 (MQ=255)
                                        gCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGa                                                 <  2:8549177/93‑1 (MQ=255)
                                        gCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGa                                                 <  1:205735/93‑1 (MQ=255)
                                        aagaagaaCGCATTCAGGCCAATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGa                                                 <  2:7402028/91‑1 (MQ=255)
                                          gaagaaCGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACa                                               >  1:9438977/1‑93 (MQ=255)
                                          gaagaaCGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACa                                               <  2:3103619/93‑1 (MQ=255)
                                              aaCGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTa                                           <  2:9278942/93‑1 (MQ=255)
                                               aCGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAg                                          <  2:5859872/93‑1 (MQ=255)
                                                  cATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGa                                       <  2:1643116/93‑1 (MQ=255)
                                                  cATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGa                                       >  1:1503075/1‑93 (MQ=255)
                                                   aTTCAGGCGCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGAc                                      <  2:7605543/93‑1 (MQ=255)
                                                   aTTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGAc                                      >  2:5099054/1‑93 (MQ=255)
                                                    ttCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACg                                     >  1:4279655/1‑93 (MQ=255)
                                                    ttCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACg                                     >  2:1981514/1‑93 (MQ=255)
                                                     tCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGa                                    >  1:9171179/1‑93 (MQ=255)
                                                     tCAGGCCCATAGCGGGTGCCAGTGCAACTGGAAGGTGGGAAAAAAGTCCCATCATAAACCTGCCGAATGCAGGGATCAGCCAGGAGGGGACGa                                    >  1:9314493/1‑93 (MQ=255)
                                                       aGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAg                                  <  2:2984663/93‑1 (MQ=255)
                                                       aGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAg                                  <  1:7397014/93‑1 (MQ=255)
                                                       aGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAg                                  <  1:6531089/93‑1 (MQ=255)
                                                        ggCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGa                                 <  1:4137347/93‑1 (MQ=255)
                                                        ggCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGa                                 <  2:6886057/93‑1 (MQ=255)
                                                         gCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGAc                                <  1:4336462/93‑1 (MQ=255)
                                                          cccATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACg                               <  1:2138871/93‑1 (MQ=255)
                                                           ccATAGCAGGTGCCAGTGCAGCTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCGGAATGCAGCGATCAGACAGGTAGTGACGAAGACgt                              <  2:1929891/93‑2 (MQ=255)
                                                            cATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACgtc                             >  1:632141/1‑91 (MQ=255)
                                                              tAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGtcgc                           >  1:2373088/1‑93 (MQ=255)
                                                              tAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGtcgc                           >  1:3040283/1‑93 (MQ=255)
                                                                gCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTg                         >  2:5355510/1‑93 (MQ=255)
                                                                  gggTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGt                       >  1:7194245/1‑93 (MQ=255)
                                                                  gggTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGt                       <  1:5253332/93‑1 (MQ=255)
                                                                   ggTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTa                      >  2:579669/1‑93 (MQ=255)
                                                                    gTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTAt                     >  2:1435540/1‑93 (MQ=255)
                                                                    gTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTAt                     >  1:110175/1‑93 (MQ=255)
                                                                     tGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATc                    >  1:9552421/1‑93 (MQ=255)
                                                                     tGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATc                    <  1:1894225/93‑1 (MQ=255)
                                                                       ccAGTGCAACTGTCAGGTTGGCAAACAGCCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                  <  2:8065407/93‑1 (MQ=255)
                                                                       ccAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                  <  2:6001300/93‑1 (MQ=255)
                                                                        cAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCAt                 >  1:8179658/1‑93 (MQ=255)
                                                                          gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTCTCCATGc               >  1:6744614/1‑93 (MQ=255)
                                                                          gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGc               <  1:6881305/93‑1 (MQ=255)
                                                                           tGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGcc              >  2:6355212/1‑93 (MQ=255)
                                                                            gCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCa             >  1:9820827/1‑93 (MQ=255)
                                                                            gCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCa             <  2:9093337/93‑1 (MQ=255)
                                                                             cagcTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAg            <  1:4569886/90‑1 (MQ=255)
                                                                             cAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAg            <  1:1320961/93‑1 (MQ=255)
                                                                               aCTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCa          >  2:9604582/1‑93 (MQ=255)
                                                                               aCTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCa          >  1:7907408/1‑93 (MQ=255)
                                                                                 tGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAAc        >  1:251939/1‑93 (MQ=255)
                                                                                   gCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGc      <  2:9779159/93‑1 (MQ=255)
                                                                                    cAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGcc     >  2:5556445/1‑93 (MQ=255)
                                                                                     aGGTTGGCAAACAGTCCCATCATAATGCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCa    <  1:4972322/93‑1 (MQ=255)
                                                                                     aGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCa    >  2:270803/1‑93 (MQ=255)
                                                                                      ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa   >  2:7867963/1‑93 (MQ=255)
                                                                                      ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa   <  1:6268077/93‑1 (MQ=255)
                                                                                      ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa   >  1:838782/1‑93 (MQ=255)
                                                                                      ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa   >  2:10016234/1‑93 (MQ=255)
                                                                                      ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa   >  2:4810069/1‑93 (MQ=255)
                                                                                       gTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAg  >  2:881091/1‑93 (MQ=255)
                                                                                          |                                                                                         
GACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCGCTGGTATCCATGCCAGCAACGCCAAG  >  NC_000913/3893903‑3894082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: