Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,894,054 G→T A62D (GCC→GAC)  yieG ← putative membrane/transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,894,0540GT99.6% 1727.6 / ‑2.0 479A62D (GCC→GAC) yieGputative membrane/transport protein
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base T (284/193);  total (286/193)
Fisher's exact test for biased strand distribution p-value = 5.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01

Only 100 of 509 total aligned reads displayed.

ATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATC  >  NC_000913/3893964‑3894143
                                                                                          |                                                                                         
 tAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGtcgc                                                                                        >  2:5266074/1‑93 (MQ=255)
 tAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGtcgc                                                                                        >  1:5718696/1‑93 (MQ=255)
  aGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCt                                                                                       >  2:19741/1‑93 (MQ=255)
   gCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTg                                                                                      <  2:3408007/93‑1 (MQ=255)
     gggTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGt                                                                                    <  1:6908912/93‑1 (MQ=255)
     gggTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGt                                                                                    >  1:7194245/1‑93 (MQ=255)
        tGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATc                                                                                 <  1:4287034/93‑1 (MQ=255)
          ccAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                                                                               <  1:2530766/93‑1 (MQ=255)
          ccAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                                                                               >  1:7870979/1‑93 (MQ=255)
          ccAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                                                                               <  1:3538621/93‑1 (MQ=255)
           cAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCAt                                                                              >  1:3665022/1‑93 (MQ=255)
             gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGc                                                                            <  1:6313269/93‑1 (MQ=255)
             gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGc                                                                            >  1:8233499/1‑93 (MQ=255)
             gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGc                                                                            >  2:2242466/1‑93 (MQ=255)
              tGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGcc                                                                           >  2:5723263/1‑93 (MQ=255)
               gCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCa                                                                          >  1:6497548/1‑93 (MQ=255)
               gCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCa                                                                          <  2:9093337/93‑1 (MQ=255)
                 aaCTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGc                                                                        >  2:515684/1‑93 (MQ=255)
                  aCTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCa                                                                       >  2:5955979/1‑93 (MQ=255)
                   cTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCaa                                                                      <  1:7417745/93‑1 (MQ=255)
                    tGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAAc                                                                     >  1:5194482/1‑93 (MQ=255)
                     ggCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAAcc                                                                    >  2:1871213/1‑92 (MQ=255)
                     ggCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACg                                                                    >  2:1683954/1‑93 (MQ=255)
                       cAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGcc                                                                  >  2:8065036/1‑93 (MQ=255)
                        aGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCa                                                                 >  1:308106/1‑93 (MQ=255)
                        aGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCa                                                                 <  1:9954883/93‑1 (MQ=255)
                         ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa                                                                <  2:9258264/93‑1 (MQ=255)
                         ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa                                                                >  2:4810069/1‑93 (MQ=255)
                          gTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAg                                                               >  1:2359241/1‑93 (MQ=255)
                           ttggCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGa                                                              >  1:2627406/4‑93 (MQ=255)
                           gtggCAAACAGTCCCATCATAATACGGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTCGTATCCATGCCAGCAACGCCAAGa                                                              <  2:9652705/90‑1 (MQ=255)
                             ggCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAt                                                            >  2:6131926/2‑93 (MQ=255)
                              gCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAtt                                                           <  1:6566719/93‑1 (MQ=255)
                               cAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAttt                                                          <  1:7346539/93‑1 (MQ=255)
                               cAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAttt                                                          <  1:951116/93‑1 (MQ=255)
                                aaaCAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTg                                                         >  2:4682983/1‑93 (MQ=255)
                                 aaCAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGc                                                        >  2:3057208/1‑93 (MQ=255)
                                  aCAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCg                                                       >  1:7560788/1‑93 (MQ=255)
                                    aGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCggg                                                     >  2:3375717/1‑93 (MQ=255)
                                     gTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGt                                                    >  2:8433416/1‑93 (MQ=255)
                                     gTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGt                                                    >  1:1807407/1‑93 (MQ=255)
                                      tCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGtt                                                   >  1:8510583/1‑93 (MQ=255)
                                      tCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGtt                                                   >  1:5888964/1‑93 (MQ=255)
                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  2:6785583/1‑93 (MQ=255)
                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  1:9291668/1‑93 (MQ=255)
                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  2:6520205/1‑93 (MQ=255)
                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  2:1451450/1‑93 (MQ=255)
                                          atcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACa                                               >  2:8216212/1‑93 (MQ=255)
                                           tcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaa                                              >  2:9392037/1‑93 (MQ=255)
                                             ataataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaa                                            >  1:8956044/1‑93 (MQ=255)
                                              taataCTGCCGAATGCGGCGATGAGACAGGAAGTGACGAAGACGACGCTGGTGTCCATGATCGCTACGCCAAGAATTTGCGCGATAACaaata                                           >  2:6347904/1‑91 (MQ=255)
                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           <  2:3212057/93‑1 (MQ=255)
                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           >  1:6736631/1‑93 (MQ=255)
                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           >  1:1673494/1‑93 (MQ=255)
                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           <  2:880501/93‑1 (MQ=255)
                                               aataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAAc                                          <  2:3288722/93‑1 (MQ=255)
                                                   cTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATg                                      <  2:4614258/93‑1 (MQ=255)
                                                    tGCCGAATGCAGCGGTCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGt                                     <  1:3310700/93‑1 (MQ=255)
                                                     gCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTa                                    <  2:7283942/93‑1 (MQ=255)
                                                      ccGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTaa                                   >  1:4524592/1‑93 (MQ=255)
                                                      ccGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTaa                                   <  2:871348/93‑1 (MQ=255)
                                                       cGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTaaa                                  >  1:5463691/1‑93 (MQ=255)
                                                       cGAATGCAGCAATCAGACAAGTAGTGACGACGACGTCGCTGGTATCCATAACAGCAACGCCAAGAATTAGCGGGTTAACAAAAACGATGTaaa                                  <  2:8935790/93‑1 (MQ=255)
                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCGAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 >  1:1996158/1‑93 (MQ=255)
                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 <  2:1597756/93‑1 (MQ=255)
                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 <  2:24308/93‑1 (MQ=255)
                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 <  2:4463785/93‑1 (MQ=255)
                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 >  2:7803420/1‑93 (MQ=255)
                                                         aaTGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAcc                                <  2:2095574/93‑1 (MQ=255)
                                                          aTGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCa                               <  2:953206/93‑1 (MQ=255)
                                                           tGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCAt                              >  1:8389535/1‑93 (MQ=255)
                                                            gCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATc                             >  2:5037184/1‑93 (MQ=255)
                                                              aGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGt                           <  1:5038469/93‑1 (MQ=255)
                                                                 gATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAg                        >  2:10040085/1‑93 (MQ=255)
                                                                 gATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAg                        >  2:3720498/1‑93 (MQ=255)
                                                                  aTCAGACAGGTAGTGACGAAGACGTCGGTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAgg                       <  2:1181345/93‑1 (MQ=255)
                                                                  aTCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAgg                       >  1:4041380/1‑93 (MQ=255)
                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGCTGTAAACCATCGGCAGGa                      >  1:2929629/1‑93 (MQ=255)
                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAgaa                      <  1:6414610/93‑3 (MQ=255)
                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      >  2:3929243/1‑93 (MQ=255)
                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      <  2:2714628/93‑1 (MQ=255)
                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      <  1:1515785/93‑1 (MQ=255)
                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      >  1:3224469/1‑93 (MQ=255)
                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      >  1:6080230/1‑93 (MQ=255)
                                                                    cAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGaa                     <  2:7166214/93‑1 (MQ=255)
                                                                     aGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAg                    >  2:5868400/1‑93 (MQ=255)
                                                                     aGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAg                    >  2:430706/1‑93 (MQ=255)
                                                                     aGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAg                    <  1:7727831/93‑1 (MQ=255)
                                                                      gACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAgg                   <  2:4173344/93‑1 (MQ=255)
                                                                       aCAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAggt                  <  2:7499861/93‑1 (MQ=255)
                                                                           gTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTa              <  1:802584/93‑1 (MQ=255)
                                                                              gTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTaaaa           >  2:6228915/1‑93 (MQ=255)
                                                                               tGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAAc          >  1:4334331/1‑93 (MQ=255)
                                                                                  cGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCgg       >  1:1322165/1‑93 (MQ=255)
                                                                                   gAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGc      >  1:9688305/1‑93 (MQ=255)
                                                                                   gAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAACCGGc      <  1:483967/93‑1 (MQ=255)
                                                                                    aaGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCg     >  1:6216226/1‑93 (MQ=255)
                                                                                    aaGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCg     >  1:1008108/1‑93 (MQ=255)
                                                                                     aGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGa    <  1:2181604/93‑1 (MQ=255)
                                                                                      gACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGAt   >  1:8699408/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATC  >  NC_000913/3893964‑3894143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: