BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,915,661	T→C	Y78C (TAC→TGC)	atpG ←	membrane‑bound ATP synthase, F1 sector, gamma‑subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,915,661	0	T	C	100.0%	1428.5 / NA	445	Y78C (TAC→TGC)	atpG	membrane‑bound ATP synthase, F1 sector, gamma‑subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (236/209); total (236/209)

Only 100 of 455 total aligned reads displayed.

TCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATG  >  NC_000913/3915571‑3915750

 cGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGc                                                                                        <  1:5568630/93‑1 (MQ=255)

  ggTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGcc                                                                                       <  2:9842679/93‑1 (MQ=255)

   gTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGccc                                                                                      >  2:3525493/1‑93 (MQ=255)

   gTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGccc                                                                                      >  1:6500495/1‑93 (MQ=255)

       aGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCAcgc                                                                                  >  2:8317577/1‑93 (MQ=255)

       aGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCAcgc                                                                                  >  1:8073015/1‑93 (MQ=255)

        ggTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCAcgcg                                                                                 >  1:7243096/1‑93 (MQ=255)

         gTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGt                                                                                >  2:1436417/1‑93 (MQ=255)

         gTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGt                                                                                <  1:10014588/93‑1 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               >  2:6615383/1‑93 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               <  2:5985459/93‑1 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               <  1:2095828/93‑1 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               <  2:2409680/93‑1 (MQ=255)

            ttCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATTGTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTa                                                                             <  2:7503570/93‑1 (MQ=255)

            ttCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTa                                                                             >  1:7412684/1‑93 (MQ=255)

             tCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTaa                                                                            <  1:2499215/93‑1 (MQ=255)

             tCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTaa                                                                            <  2:3094817/93‑1 (MQ=255)

             tCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTaa                                                                            >  1:6191579/1‑93 (MQ=255)

              cATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAc                                                                           <  2:1184842/93‑1 (MQ=255)

              cATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAc                                                                           >  1:3213413/1‑93 (MQ=255)

              cATGTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAc                                                                           <  1:2021003/93‑1 (MQ=255)

               aTTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACg                                                                          <  1:4495767/93‑1 (MQ=255)

                 ttCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTc                                                                        <  1:7046182/93‑1 (MQ=255)

                      ccAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCATGCAGCCCACGCGTTTTACGTCGCGGt                                                                   >  2:4514171/1‑93 (MQ=255)

                      ccAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGt                                                                   >  2:4769893/1‑93 (MQ=255)

                      ccAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGt                                                                   <  1:3358288/93‑1 (MQ=255)

                       cagcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTc                                                                  <  2:8734250/93‑1 (MQ=255)

                       cagcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTc                                                                  >  1:4940672/1‑93 (MQ=255)

                        agcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCt                                                                 >  1:3027831/1‑93 (MQ=255)

                        agcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCt                                                                 >  2:386469/1‑93 (MQ=255)

                          cagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGCCTTc                                                               >  1:2284124/1‑93 (MQ=255)

                           agTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTcc                                                              >  1:2377461/1‑93 (MQ=255)

                            gTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCa                                                             >  1:922124/1‑93 (MQ=255)

                             ttttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAg                                                            >  1:1511444/1‑93 (MQ=255)

                             ttttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAg                                                            >  2:3301454/1‑93 (MQ=255)

                               ttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAgga                                                          >  2:2054653/1‑92 (MQ=255)

                               ttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGt                                                          <  1:1859480/93‑1 (MQ=255)

                                 ttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTaa                                                        >  1:4727123/1‑93 (MQ=255)

                                    aaCAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAggg                                                     <  1:9732902/93‑1 (MQ=255)

                                     aCAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAgggg                                                    >  1:9492495/1‑92 (MQ=255)

                                     aCAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGt                                                    >  2:769092/1‑93 (MQ=255)

                                     aCAGGTTAAGGTTCAAACCACCGCACAAACCACGGGCGGCCGACACCACCAGGCAGCCCACGCGGTCAACGTCGCGGGCCCCCAGGAAAgggg                                                    >  1:7686378/1‑92 (MQ=255)

                                        ggTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCt                                                 <  2:6492155/93‑1 (MQ=255)

                                        ggTTAATGGTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTATCGTCGCGGTCTTCCATGTAAGGGTGCt                                                 <  2:7094487/93‑1 (MQ=255)

                                         gTTAATGTTCTAACCACCGCACAAACCACGGTCAGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCtt                                                >  2:5929513/1‑93 (MQ=255)

                                         gTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCtt                                                >  2:1725768/1‑93 (MQ=255)

                                         gTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCtt                                                >  1:3952686/1‑93 (MQ=255)

                                          ttAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTta                                               <  2:2767856/93‑1 (MQ=255)

                                           tAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTtat                                              >  2:1914272/1‑93 (MQ=255)

                                              tGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAtt                                           <  2:4964915/93‑1 (MQ=255)

                                              tGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAtt                                           <  1:9821933/93‑1 (MQ=255)

                                              tGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAtt                                           >  1:6692779/1‑93 (MQ=255)

                                               gctCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTc                                          <  2:4752132/91‑1 (MQ=255)

                                               gTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGTGAAGGGTGCTTATATTc                                          >  1:8969027/1‑93 (MQ=255)

                                                ttCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTcc                                         >  2:8134650/1‑93 (MQ=255)

                                                 tCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCa                                        >  2:6147405/1‑93 (MQ=255)

                                                 tCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCa                                        <  2:2580905/93‑1 (MQ=255)

                                                  cAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAg                                       >  1:2756493/1‑93 (MQ=255)

                                                  cAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAg                                       >  2:4162552/1‑93 (MQ=255)

                                                  cAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAg                                       <  1:9889487/93‑1 (MQ=255)

                                                   aaaCCACCGCACAAACCACGGTCGGTCGACAGCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGa                                      >  2:3742991/1‑93 (MQ=255)

                                                    aaCCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAt                                     <  2:6527738/93‑1 (MQ=255)

                                                    aaCCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAt                                     >  1:35269/1‑93 (MQ=255)

                                                       caccGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCGGGTAAGGGTGCTTATATTACAGATTAc                                  >  2:950688/1‑93 (MQ=255)

                                                       caccGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTAc                                  >  2:5466134/1‑93 (MQ=255)

                                                        accGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTAcc                                 >  2:5791162/1‑93 (MQ=255)

                                                         ccGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCg                                >  1:6345333/1‑93 (MQ=255)

                                                            cacaAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCgtgt                             >  1:8516818/1‑93 (MQ=255)

                                                              caAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGc                           <  1:8429591/93‑1 (MQ=255)

                                                              caAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGc                           >  2:7463002/1‑93 (MQ=255)

                                                              caAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGc                           >  2:1864096/1‑93 (MQ=255)

                                                                aaCCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCaa                         >  2:9056435/1‑93 (MQ=255)

                                                                  ccACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAgg                       <  1:7805713/93‑1 (MQ=255)

                                                                  ccACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAgg                       <  1:5955326/93‑1 (MQ=255)

                                                                   cACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGt                      >  2:7860774/1‑93 (MQ=255)

                                                                    aCGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTg                     <  2:6889932/93‑1 (MQ=255)

                                                                    aCGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTg                     >  1:5780383/1‑93 (MQ=255)

                                                                       gtcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGAcc                  >  2:7811584/1‑93 (MQ=255)

                                                                       gtcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGAcc                  <  2:8480749/93‑1 (MQ=255)

                                                                       gtcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGAcc                  <  1:372712/93‑1 (MQ=255)

                                                                        tcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCa                 >  2:9756891/1‑93 (MQ=255)

                                                                          ggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAAt               >  1:3077283/1‑93 (MQ=255)

                                                                           gtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATc              >  1:7521780/1‑93 (MQ=255)

                                                                           gtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATc              <  2:4384067/93‑1 (MQ=255)

                                                                           gtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATc              >  1:9352105/1‑93 (MQ=255)

                                                                            tcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCa             <  2:7201190/93‑1 (MQ=255)

                                                                             cgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCAc            <  1:4215830/93‑1 (MQ=255)

                                                                              gACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACt           <  1:6598304/93‑1 (MQ=255)

                                                                              gACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGAGTGCAAGGTGACCCATCACt           >  2:5203586/1‑93 (MQ=255)

                                                                              gACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGGAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACt           >  2:8949379/1‑93 (MQ=255)

                                                                               acacCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACtt          >  1:5148318/1‑93 (MQ=255)

                                                                                caccacCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACttt         <  1:7871635/93‑1 (MQ=255)

                                                                                 accaccAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTg        >  1:1193228/1‑93 (MQ=255)

                                                                                 accaccAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTg        >  1:9646372/1‑93 (MQ=255)

                                                                                  ccaccaGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTgc       >  1:1436871/1‑93 (MQ=255)

                                                                                   caccaGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTgcg      >  2:2885481/1‑93 (MQ=255)

                                                                                      caGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCag   >  2:2299300/1‑92 (MQ=255)

                                                                                      caGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCAt   >  1:87218/1‑93 (MQ=255)

                                                                                      caGGCAGCCCACACGTTTAACGTCGCGGTGTACCAGATACGGGTGCTAATATTCCAGATTACCGTGTGCAAGGTGACCAATCCCTTTGCGCAt   <  2:1323100/93‑1 (MQ=255)

                                                                                       aGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATg  >  2:3549766/1‑93 (MQ=255)

TCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATG  >  NC_000913/3915571‑3915750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`