BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,917,055	T→C	Q144R (CAG→CGG)	atpA ←	membrane‑bound ATP synthase, F1 sector, alpha‑subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,917,055	0	T	C	100.0%	1190.2 / NA	369	Q144R (CAG→CGG)	atpA	membrane‑bound ATP synthase, F1 sector, alpha‑subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (173/196); total (173/196)

Only 100 of 389 total aligned reads displayed.

CCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCTGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCGTCGATT  >  NC_000913/3916965‑3917144

ccTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGa                                                                                         <  1:3231210/93‑1 (MQ=255)

ccTGTCTGACGGTCACCGATGATCAAGTCTCGCTGACCTCGACCGATGGGGATCATGGAGTCAACGGCTTTAGAACCGGTCTGTACCGGCCGa                                                                                         <  2:8270380/93‑1 (MQ=255)

 cTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGTCTTTATAACCGGTCTGTACCGGCCGAt                                                                                        <  1:2250798/93‑1 (MQ=255)

  tGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATc                                                                                       <  1:7078732/93‑1 (MQ=255)

  tGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATc                                                                                       >  2:10034669/1‑93 (MQ=255)

    tCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTa                                                                                     <  1:7032990/93‑1 (MQ=255)

     cTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTAc                                                                                    <  1:1736181/93‑1 (MQ=255)

      tGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACg                                                                                   >  2:4896854/1‑93 (MQ=255)

         cGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGGGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGAc                                                                                <  1:2097191/93‑1 (MQ=255)

         cGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGAc                                                                                <  2:4596424/93‑1 (MQ=255)

         cGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGAc                                                                                <  2:2788972/93‑1 (MQ=255)

         cGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGAc                                                                                <  2:6135062/93‑1 (MQ=255)

         cGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGAc                                                                                <  2:6653983/93‑1 (MQ=255)

           gTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTg                                                                              >  2:2161835/1‑93 (MQ=255)

            tCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGa                                                                             <  2:3753001/93‑1 (MQ=255)

             cACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGAc                                                                            <  2:415721/93‑1 (MQ=255)

             cACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGAc                                                                            >  2:7183667/1‑93 (MQ=255)

             cACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGAc                                                                            >  2:995042/1‑93 (MQ=255)

              aCCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACg                                                                           >  2:4844305/1‑93 (MQ=255)

               ccGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGt                                                                          >  1:115690/1‑93 (MQ=255)

               ccGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGt                                                                          >  1:6342421/1‑93 (MQ=255)

                cGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGtt                                                                         >  2:5219799/1‑93 (MQ=255)

                 gatgatCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTc                                                                        >  2:7271234/1‑93 (MQ=255)

                 gatgatCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTc                                                                        >  1:4805655/1‑93 (MQ=255)

                  atgatCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGTTCTGTACCGGCCGATCTACGGACTGACGTTCg                                                                       >  2:892917/1‑93 (MQ=255)

                  atgatCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCg                                                                       >  1:7680985/1‑93 (MQ=255)

                   tgatCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGa                                                                      >  2:6916901/1‑93 (MQ=255)

                    gatCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGAt                                                                     <  2:5802008/93‑1 (MQ=255)

                     atCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATa                                                                    <  2:4428483/93‑1 (MQ=255)

                      tCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATaa                                                                   <  2:2315231/93‑1 (MQ=255)

                      tCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATaa                                                                   <  2:9575169/93‑1 (MQ=255)

                      tCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATaa                                                                   <  2:9817137/93‑1 (MQ=255)

                      gcAATTCCAGCTGACCACGACCGATAGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATaa                                                                   <  1:5455727/92‑1 (MQ=255)

                       taaTTCACGCAGACCACGACCGATGGGGATCATGGAGTCAACGGTTTTATAACCGGTCGGTACCGGCCGATCTACGGACTGACGTTCGATAAc                                                                  <  2:114136/92‑1 (MQ=255)

                        aaTTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAAcc                                                                 >  2:8489043/1‑92 (MQ=255)

                         aTTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCAGTCTGTACCGGCCGATCTACGAACTGACGTTCGATAACGc                                                                >  2:3021953/1‑93 (MQ=255)

                           tCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGccc                                                              <  2:769102/93‑1 (MQ=255)

                           tCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGccc                                                              <  1:3086101/93‑1 (MQ=255)

                             ccGCTGACCACGACCGATGGGGATGATGGAGTCACCGGCTTTATGCCCTGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCgg                                                            <  1:9380630/92‑1 (MQ=255)

                                 tGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCg                                                        >  2:3566978/1‑93 (MQ=255)

                                 tGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCg                                                        >  2:4066741/1‑93 (MQ=255)

                                  gACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGa                                                       <  2:587345/93‑1 (MQ=255)

                                  gACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGa                                                       >  2:8349061/1‑93 (MQ=255)

                                   cccACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACAGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGAt                                                      <  1:6322231/92‑1 (MQ=255)

                                    ccACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGAtt                                                     <  1:7299101/93‑1 (MQ=255)

                                     cACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTg                                                    <  2:8688690/93‑1 (MQ=255)

                                       cGACCGATTGTGATCATGGAGTCAACGGTTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCt                                                  <  1:9445969/93‑1 (MQ=255)

                                          ccGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCt                                               >  1:1565162/1‑93 (MQ=255)

                                           cGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTa                                              >  2:806621/1‑93 (MQ=255)

                                           cGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTa                                              >  1:370090/1‑93 (MQ=255)

                                            gATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAc                                             >  1:4250493/1‑93 (MQ=255)

                                            gATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAc                                             >  1:5040579/1‑93 (MQ=255)

                                            gATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAc                                             >  2:8627325/1‑93 (MQ=255)

                                             aTTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAca                                            >  2:5114737/1‑93 (MQ=255)

                                              ttGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAcag                                           <  1:4146622/93‑1 (MQ=255)

                                               tGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAcagc                                          <  1:7824427/93‑1 (MQ=255)

                                                gggATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAcagca                                         <  1:983808/93‑1 (MQ=255)

                                                gggATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAcagca                                         >  1:6681872/1‑93 (MQ=255)

                                                 ggATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTAcagcag                                        <  1:5796159/93‑1 (MQ=255)

                                                  gATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCaga                                       >  1:1998809/1‑93 (MQ=255)

                                                   aTCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCagag                                      <  1:8480745/93‑1 (MQ=255)

                                                    tCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAgaga                                     <  1:6141373/93‑1 (MQ=255)

                                                    tCATGAAGTCAACGGCGTTATAACCGGTGTGTACCGGCCGATCTACGGACTGACGGTCGATAACGCCCGGAGCGATTGCTTCTACAGCAgaga                                     <  1:5325103/93‑1 (MQ=255)

                                                     cATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGaa                                    <  2:5409851/93‑1 (MQ=255)

                                                      aTGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAg                                   >  1:1627375/1‑93 (MQ=255)

                                                      aTGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAg                                   <  2:1286117/93‑1 (MQ=255)

                                                       tGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGc                                  >  2:9380523/1‑93 (MQ=255)

                                                       tGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGc                                  >  1:9075429/1‑93 (MQ=255)

                                                        ggAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGcc                                 <  1:2681/93‑1 (MQ=255)

                                                        ggAGTCAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGcc                                 >  2:5676842/1‑93 (MQ=255)

                                                         gAGGCAACGGCTTTATAACCGGTCTGTCCCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCcg                                <  1:342594/93‑1 (MQ=255)

                                                             cAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCcgtcgt                            <  1:9254051/93‑1 (MQ=255)

                                                             cAACGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCcgtcgt                            <  1:2545762/93‑1 (MQ=255)

                                                                cGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGAt                         <  1:5573890/93‑1 (MQ=255)

                                                                cGGCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGAt                         >  1:7608464/1‑93 (MQ=255)

                                                                 ggCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATc                        >  2:3194911/1‑93 (MQ=255)

                                                                 ggCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATc                        >  2:7512162/1‑93 (MQ=255)

                                                                  gCTTTATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATcc                       >  1:8758134/1‑93 (MQ=255)

                                                                  ccTTTATAGCCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATcc                       <  2:2231524/92‑1 (MQ=255)

                                                                    tttATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAg                     >  1:2218668/1‑93 (MQ=255)

                                                                    tttATAACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAg                     >  1:454851/1‑93 (MQ=255)

                                                                      tataACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCg                   >  2:2481971/1‑93 (MQ=255)

                                                                       ataACCGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCgg                  >  1:6433996/1‑93 (MQ=255)

                                                                         aaCCGGTCTGTACCGGCCGATCTACGGACGGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGAc                <  1:108058/93‑1 (MQ=255)

                                                                            cGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCtt             <  1:1385651/93‑1 (MQ=255)

                                                                            cGGTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCtt             <  2:7891489/93‑1 (MQ=255)

                                                                              gTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTa           >  1:1948786/1‑93 (MQ=255)

                                                                              gTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTa           <  1:956406/93‑1 (MQ=255)

                                                                              gTCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTa           <  1:810019/93‑1 (MQ=255)

                                                                               tCTGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTAc          <  1:8349062/93‑1 (MQ=255)

                                                                                 tGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCg        >  2:6497954/1‑93 (MQ=255)

                                                                                 tGTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCg        >  2:3502482/1‑93 (MQ=255)

                                                                                  gTACCTGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCGt       <  2:9080108/93‑1 (MQ=255)

                                                                                  gTACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCGt       <  1:3786904/93‑1 (MQ=255)

                                                                                   tACCGGCCGCTCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGGGAAGCCGGCGTGATCCAGCGGATCTTTACCTTc      >  2:8742506/1‑93 (MQ=255)

                                                                                   tACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAATCCGTCGTGATCCAGCGGACCTTTACCGTc      <  2:2609604/93‑1 (MQ=255)

                                                                                   tACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCGTc      >  1:3876041/1‑93 (MQ=255)

                                                                                   tACCGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCGTc      <  1:4006226/93‑1 (MQ=255)

                                                                                      cGGCCGATTTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCGTCGAt   <  2:1734732/93‑1 (MQ=255)

                                                                                      cGGCCGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGAGATCCAGCGGACCTTTACCGTCGAt   >  2:1928499/1‑93 (MQ=255)

CCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCGGTCTGTACCGGCTGATCTACGGACTGACGTTCGATAACGCCCGGAGCGATTGCTTCTACAGCAGAGAAGCCGTCGTGATCCAGCGGACCTTTACCGTCGATT  >  NC_000913/3916965‑3917144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`