BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,974,008	C→T	A40V (GCG→GTG)	wzxE →	putative cytochrome

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,974,008	0	C	T	99.7%	1138.2 / NA	330	A40V (GCG→GTG)	wzxE	putative cytochrome
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (151/178); minor base G (1/0); total (152/178)
Fisher's exact test for biased strand distribution p-value = 4.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 351 total aligned reads displayed.

CGGCGGCCAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGCGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGTACC  >  NC_000913/3973918‑3974097

 ggcggcCAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCtggtgga                                                                                        >  2:6059679/1‑92 (MQ=255)

  gcggcCAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCa                                                                                       >  1:1352639/1‑93 (MQ=255)

     gcgaGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAAt                                                                                    <  1:3469086/90‑1 (MQ=255)

     gcCAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAAt                                                                                    <  1:877664/93‑1 (MQ=255)

      ccAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAAtt                                                                                   >  1:123809/1‑93 (MQ=255)

      ccAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAAtt                                                                                   >  2:5074051/1‑93 (MQ=255)

        aGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTc                                                                                 >  1:9139843/1‑93 (MQ=255)

         gTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTcc                                                                                >  2:3708242/1‑93 (MQ=255)

         gTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGCAAGTTGCTGGCGGTGTCATTTGGTTCGGCGGGGCTTGGGCTGGTGGCTAATTGcc                                                                                >  2:8975308/1‑93 (MQ=255)

          tACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTccc                                                                               >  1:2154250/1‑92 (MQ=255)

          tACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCg                                                                               >  2:4467709/1‑93 (MQ=255)

          tACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCg                                                                               >  1:5251114/1‑93 (MQ=255)

            cacTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGcc                                                                             >  2:742931/1‑93 (MQ=255)

            cacTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGGGGCAAATTTCcccc                                                                             >  2:781691/1‑93 (MQ=255)

             acTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCa                                                                            >  2:1494494/1‑93 (MQ=255)

              cTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAg                                                                           <  2:8249645/93‑1 (MQ=255)

               tGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGt                                                                          >  2:7937030/1‑93 (MQ=255)

               tGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTGGGTCTGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGt                                                                          <  1:6190874/93‑1 (MQ=255)

                ggTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGtt                                                                         <  1:3092805/93‑1 (MQ=255)

                 gTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTg                                                                        >  1:428972/1‑93 (MQ=255)

                  tCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGa                                                                       >  2:8634111/1‑93 (MQ=255)

                      gATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTAc                                                                   <  2:6487519/93‑1 (MQ=255)

                        ttGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCg                                                                 >  1:2721280/1‑93 (MQ=255)

                        ttGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCg                                                                 <  2:6690034/93‑1 (MQ=255)

                         tgttGCCGGGTTACTGGTCGGTAAGTTGGTGGTGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCTCCAGTTGATTACCGt                                                                <  1:8430461/90‑1 (MQ=255)

                         tGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGt                                                                <  2:7609357/93‑1 (MQ=255)

                          ggTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTg                                                               >  2:3949876/1‑93 (MQ=255)

                            tGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCt                                                             >  1:2347905/1‑93 (MQ=255)

                               cGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCgg                                                          <  1:5302362/93‑1 (MQ=255)

                                gggTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGc                                                         <  2:222759/93‑1 (MQ=255)

                                gggTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGc                                                         >  2:7055289/1‑93 (MQ=255)

                                 ggTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCACCAGTTGATTACCGTGCTCGGCg                                                        <  1:1483531/93‑1 (MQ=255)

                                  gTTACTGGTCGGTAAGTGGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGt                                                       <  2:4487839/93‑1 (MQ=255)

                                   ttACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTg                                                      >  2:9390776/1‑93 (MQ=255)

                                   ttACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTg                                                      <  1:1723427/93‑1 (MQ=255)

                                    tACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTATCGTGCTCGGCGTGc                                                     <  2:6412267/93‑1 (MQ=255)

                                    tACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGc                                                     >  1:5533806/1‑93 (MQ=255)

                                    tACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGc                                                     >  1:496298/1‑93 (MQ=255)

                                     aCTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCt                                                    <  1:6633928/93‑1 (MQ=255)

                                     aCTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCt                                                    >  1:2114213/1‑93 (MQ=255)

                                      cTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCtt                                                   <  1:5125063/93‑1 (MQ=255)

                                          tCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCg                                               <  2:3680693/93‑1 (MQ=255)

                                           cGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCgg                                              <  1:6909691/93‑1 (MQ=255)

                                             gaacgTTGCTGGCGGTGGCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCgggg                                            >  2:3556633/5‑93 (MQ=255)

                                             gTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCgggg                                            >  1:8227277/1‑93 (MQ=255)

                                              tAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGc                                           <  2:5152596/93‑1 (MQ=255)

                                              tAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGc                                           >  2:4958716/1‑93 (MQ=255)

                                              tAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGc                                           >  1:323346/1‑93 (MQ=255)

                                               aaGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCt                                          <  2:1726666/93‑1 (MQ=255)

                                                   tGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGcc                                      >  1:4105224/1‑92 (MQ=255)

                                                   tGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCa                                      <  1:6761327/93‑1 (MQ=255)

                                                   tGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCa                                      <  1:969790/93‑1 (MQ=255)

                                                   tGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCa                                      <  2:401454/93‑1 (MQ=255)

                                                       ggCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCtt                                  <  2:3150288/93‑1 (MQ=255)

                                                       ggCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCtt                                  >  1:268221/1‑93 (MQ=255)

                                                        gCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCttt                                 <  1:8647853/93‑1 (MQ=255)

                                                         cGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTa                                >  1:4454803/1‑93 (MQ=255)

                                                          ggTGTCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTaa                               >  1:5760375/1‑93 (MQ=255)

                                                           gtgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAAc                              <  2:9740082/93‑1 (MQ=255)

                                                           gtgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAAc                              >  2:8806993/1‑93 (MQ=255)

                                                           gtgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAAc                              >  2:2262602/1‑93 (MQ=255)

                                                           gtgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAAc                              >  1:4784995/1‑93 (MQ=255)

                                                           gtgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAAc                              <  1:6777754/93‑1 (MQ=255)

                                                            tgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACg                             >  2:8429991/1‑93 (MQ=255)

                                                            tgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACg                             <  2:6834002/93‑1 (MQ=255)

                                                            tgtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACg                             >  1:7429686/1‑93 (MQ=255)

                                                             gtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACgg                            <  2:2104760/93‑1 (MQ=255)

                                                             gtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACgg                            >  2:1105572/1‑93 (MQ=255)

                                                             gtCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACgg                            >  1:7057753/1‑93 (MQ=255)

                                                             gtCATTTGGTCCGGCGGAGCTTGGGCTGGTGGCAAATTTCCGCCAGTAGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACgg                            <  1:8484536/93‑1 (MQ=255)

                                                              tCATTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGgt                           <  2:4727647/93‑1 (MQ=255)

                                                                aTTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGgtgt                         <  2:2535542/93‑1 (MQ=255)

                                                                aTTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGgtgt                         >  1:2240515/1‑93 (MQ=255)

                                                                aTTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGgtgt                         >  2:7257944/1‑93 (MQ=255)

                                                                aTTTGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGgtgt                         >  2:7083126/1‑93 (MQ=255)

                                                                   tGGTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAAc                      <  1:4542978/93‑1 (MQ=255)

                                                                     gTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCa                    >  1:3738222/1‑93 (MQ=255)

                                                                     gTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCa                    >  2:7304610/1‑93 (MQ=255)

                                                                     gTCCGGCGGGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCa                    >  2:435161/1‑93 (MQ=255)

                                                                        cggcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAAt                 <  1:1823598/93‑1 (MQ=255)

                                                                        cggcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAAt                 <  1:5194449/93‑1 (MQ=255)

                                                                         ggcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATa                <  2:5379735/93‑1 (MQ=255)

                                                                         ggcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATa                <  1:10024085/93‑1 (MQ=255)

                                                                         ggcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATa                >  1:3327858/1‑93 (MQ=255)

                                                                         ggcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATa                <  2:1585038/93‑1 (MQ=255)

                                                                         ggcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATa                <  1:8856091/93‑1 (MQ=255)

                                                                         cgcgtGGCTTGTGCTGGTGGCAAATTTCCGCCATTTGATTACCGTGCTCGGCGTACTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATa                <  2:4223029/92‑1 (MQ=255)

                                                                          gcggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATAc               <  1:6022828/93‑1 (MQ=255)

                                                                           cggGGCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACg              <  1:3672807/93‑1 (MQ=255)

                                                                            ggggCTTTGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGGGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGt             <  2:4775951/93‑1 (MQ=255)

                                                                            ggggCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGt             <  2:9122600/93‑1 (MQ=255)

                                                                             gggCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGtt            >  2:2984768/1‑93 (MQ=255)

                                                                              ggCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTg           >  2:6164575/1‑93 (MQ=255)

                                                                               gCTTGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGc          <  2:9324626/93‑1 (MQ=255)

                                                                                 ttGGGCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGccc        <  1:9594473/93‑1 (MQ=255)

                                                                                  tGGGGTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCa       <  1:7718221/93‑1 (MQ=255)

                                                                                    ggCTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGt     >  1:9898491/1‑93 (MQ=255)

                                                                                      cTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGTAc   >  2:1152732/1‑93 (MQ=255)

                                                                                      cTGGTGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGTAc   >  1:7576271/1‑93 (MQ=255)

                                                                                       tggtggCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGTAcc  >  1:644001/1‑93 (MQ=255)

CGGCGGCCAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGCGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGTACC  >  NC_000913/3973918‑3974097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`