Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,991,607 G→A D22D (GAC→GAT
V49I (GTC→ATC) 
cyaY ←
b3808 →
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,991,6070GA100.0% 1498.8 / NA 409D22D (GAC→GAT
V49I (GTC→ATC) 
cyaY
b3808
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (218/191);  total (218/191)

Only 100 of 442 total aligned reads displayed.

GTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT  >  NC_000913/3991517‑3991696
                                                                                          |                                                                                         
gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                                                                                         >  1:9882518/1‑93 (MQ=255)
gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                                                                                         >  1:2910862/1‑93 (MQ=255)
gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                                                                                         >  2:252000/1‑93 (MQ=255)
 ttGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATcc                                                                                        <  1:6452407/93‑1 (MQ=255)
 ttGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATcc                                                                                        <  1:225777/93‑1 (MQ=255)
 ttGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATcc                                                                                        <  2:2076687/93‑1 (MQ=255)
  tGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCACAGTCGATATCGCTGTCGCCATCCCAGTCATCCa                                                                                       <  2:6372006/93‑1 (MQ=255)
   gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                                                                                      >  2:6579212/1‑93 (MQ=255)
   gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                                                                                      >  1:9581474/1‑93 (MQ=255)
   gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                                                                                      <  1:2080089/93‑1 (MQ=255)
    aTAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAgg                                                                                     <  1:5999364/93‑1 (MQ=255)
    aTAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAgg                                                                                     <  2:198763/93‑1 (MQ=255)
    aTAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAgg                                                                                     >  2:2850771/1‑93 (MQ=255)
    aTAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAgg                                                                                     >  2:7786822/1‑93 (MQ=255)
     tAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGc                                                                                    >  1:155713/1‑93 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   >  1:2190401/1‑93 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   <  1:6760493/93‑1 (MQ=255)
       aTGATTTTGCTGCCCCTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGt                                                                                  <  2:1282319/93‑1 (MQ=255)
        tGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGtt                                                                                 >  2:3152070/1‑93 (MQ=255)
             ttGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCa                                                                            >  1:9298716/1‑93 (MQ=255)
              tgctgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCaa                                                                           >  1:1213269/1‑93 (MQ=255)
                 tgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATgg                                                                        >  2:7863376/1‑93 (MQ=255)
                  gcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGt                                                                       >  1:3053338/1‑93 (MQ=255)
                  gcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGt                                                                       <  2:2265665/93‑1 (MQ=255)
                    cactctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCa                                                                     <  1:3975359/90‑1 (MQ=255)
                     cctctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAg                                                                    <  1:7747076/91‑1 (MQ=255)
                     actctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATTGTCac                                                                    >  1:1961718/3‑92 (MQ=255)
                     actctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAg                                                                    >  1:574629/3‑93 (MQ=255)
                       tctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGcc                                                                  >  1:8446550/1‑93 (MQ=255)
                       tctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGcc                                                                  >  2:9200520/1‑93 (MQ=255)
                         tcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCag                                                                >  2:5433473/1‑93 (MQ=255)
                           aaaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATGCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCagag                                                              >  1:7424881/1‑93 (MQ=255)
                            aaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGt                                                             >  1:421293/1‑93 (MQ=255)
                              ggTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTATCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGCTg                                                           >  1:7802667/1‑93 (MQ=255)
                                 aaTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATc                                                        >  2:3784871/1‑93 (MQ=255)
                                  aTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCa                                                       <  2:6711740/93‑1 (MQ=255)
                                   tGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAg                                                      >  2:7367925/1‑93 (MQ=255)
                                   tGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAg                                                      >  1:7946345/1‑93 (MQ=255)
                                   tGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAg                                                      <  1:3326575/93‑1 (MQ=255)
                                     gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                    <  2:2951059/93‑1 (MQ=255)
                                      tCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCa                                                   <  2:4821609/93‑1 (MQ=255)
                                        aGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAgg                                                 >  2:5737703/1‑93 (MQ=255)
                                        aGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAgg                                                 >  2:3501250/1‑93 (MQ=255)
                                         gTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGc                                                <  2:4188002/93‑1 (MQ=255)
                                           aCGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGa                                              <  2:584717/93‑1 (MQ=255)
                                             gccgccGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATg                                            >  2:7660209/1‑93 (MQ=255)
                                             gccgccGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATg                                            <  1:3568655/93‑1 (MQ=255)
                                             cccgccgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATg                                            <  1:6116465/92‑1 (MQ=255)
                                              ccgccgTTGATTTCGCAGTCGATATCGCTCTCGCCATCCCAGTCAGCCAGGCGTTCTTCAATGGTCCGCCAGGGTTGATCAGCACGGCGATGa                                           >  1:1418327/1‑93 (MQ=255)
                                                gccgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGaat                                         >  1:3138931/1‑92 (MQ=255)
                                                  cgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGTGTTCTTCAATGTTCAGCCAGAGTTGATCAGCCAGGCGATGAAAtt                                       >  1:8969662/1‑93 (MQ=255)
                                                    ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCa                                     <  1:4091045/93‑1 (MQ=255)
                                                    ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCa                                     <  1:497861/93‑1 (MQ=255)
                                                    ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGACAGAGTTGATCAGCCAGGCGATGAAATTCa                                     >  1:3230979/1‑93 (MQ=255)
                                                     tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                    <  2:6896896/93‑1 (MQ=255)
                                                     tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                    <  1:4817381/93‑1 (MQ=255)
                                                      gATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACt                                   >  2:8156460/1‑93 (MQ=255)
                                                      gATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACt                                   >  2:7264634/1‑93 (MQ=255)
                                                       aTTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTTAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTg                                  <  2:7573540/93‑1 (MQ=255)
                                                        tttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGTGATGAAATTCACTGt                                 <  1:4377100/93‑1 (MQ=255)
                                                        tttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGt                                 <  1:6530724/93‑1 (MQ=255)
                                                        tttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGt                                 <  2:1496484/93‑1 (MQ=255)
                                                            gCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGtt                             >  1:8014965/1‑93 (MQ=255)
                                                            gCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGtt                             <  2:5265762/93‑1 (MQ=255)
                                                             cAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTc                            <  2:2648215/93‑1 (MQ=255)
                                                              aGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCa                           >  2:9006106/1‑93 (MQ=255)
                                                               gTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAt                          <  1:9993090/93‑1 (MQ=255)
                                                               gTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAt                          >  1:7086719/1‑93 (MQ=255)
                                                                tCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAtt                         <  2:9519861/93‑1 (MQ=255)
                                                                tCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAtt                         >  1:4551275/1‑93 (MQ=255)
                                                                tCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAtt                         >  1:2515699/1‑93 (MQ=255)
                                                                tCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAtt                         >  2:1798079/1‑93 (MQ=255)
                                                                  gATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCAAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       <  2:8042743/93‑1 (MQ=255)
                                                                   atatCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgtt                      <  2:5043311/93‑1 (MQ=255)
                                                                   atatCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgtt                      >  1:8592369/1‑93 (MQ=255)
                                                                    tatCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgttg                     >  2:3649493/1‑93 (MQ=255)
                                                                     atCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATtgttgt                    >  2:1380961/1‑93 (MQ=255)
                                                                      tCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTa                   >  1:5154101/1‑93 (MQ=255)
                                                                      tCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTa                   <  2:5551548/93‑1 (MQ=255)
                                                                      tCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTa                   <  2:5784355/93‑1 (MQ=255)
                                                                         cTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATcc                <  1:8292656/93‑1 (MQ=255)
                                                                         cTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATcc                <  1:592049/93‑1 (MQ=255)
                                                                         cTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATcc                >  1:3724105/1‑93 (MQ=255)
                                                                           gTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTg              <  1:809266/93‑1 (MQ=255)
                                                                               ccATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtttt          >  1:3888602/1‑93 (MQ=255)
                                                                                 aTCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTa        >  1:10016009/1‑93 (MQ=255)
                                                                                 aTCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTa        >  1:7299039/1‑93 (MQ=255)
                                                                                 aTCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTa        >  2:8780572/1‑93 (MQ=255)
                                                                                  tCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa       >  1:8887354/1‑93 (MQ=255)
                                                                                  tCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa       >  2:8309629/1‑93 (MQ=255)
                                                                                    ccAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGt     >  1:5491371/1‑93 (MQ=255)
                                                                                     cAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTg    >  2:9706924/1‑93 (MQ=255)
                                                                                     cAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTg    <  2:4927645/93‑1 (MQ=255)
                                                                                     cAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTg    <  2:8707572/93‑1 (MQ=255)
                                                                                     cAGTCATCCAGGCGTTCTTCAATGGACAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTACGTg    >  1:2801150/1‑93 (MQ=255)
                                                                                      aGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa   <  1:6271811/93‑1 (MQ=255)
                                                                                      aGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa   >  2:9896161/1‑93 (MQ=255)
                                                                                      aGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa   <  2:4606914/93‑1 (MQ=255)
                                                                                       gtcatcCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAt  <  1:7525725/93‑1 (MQ=255)
                                                                                       gtcatcCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAt  >  1:8807199/1‑93 (MQ=255)
                                                                                          |                                                                                         
GTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT  >  NC_000913/3991517‑3991696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: