BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,035,428	A→G	noncoding (330/2905 nt)	rrlA →	23S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,035,428	0	A	G	99.7%	725.8 / ‑5.3	302	noncoding (330/2905 nt)	rrlA	23S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (113/187); total (114/188)
Fisher's exact test for biased strand distribution p-value = 3.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01

Only 100 of 311 total aligned reads displayed.

CAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG  >  NC_000913/4035338‑4035506

cAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCa                                                                              <  1:1853716/93‑1 (MQ=21)

 aGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAg                                                                             <  1:10001236/93‑1 (MQ=18)

     gcggcgAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGcccc                                                                         <  2:7208431/93‑1 (MQ=21)

        gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTa                                                                      <  1:7220364/93‑1 (MQ=21)

          gagcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTaca                                                                    >  2:3034929/1‑93 (MQ=18)

           agcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTacac                                                                   <  2:7108926/93‑1 (MQ=21)

           agcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTacac                                                                   <  2:827804/93‑1 (MQ=21)

           agcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTacac                                                                   <  2:4072384/93‑1 (MQ=18)

           agcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTacac                                                                   >  2:2974933/1‑93 (MQ=18)

           agcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGCacac                                                                   >  1:7036806/1‑93 (MQ=16)

             cgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaa                                                                 <  2:4407678/93‑1 (MQ=18)

               aaCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGTCAGCCCCGTACACaaaa                                                               <  1:4993959/93‑1 (MQ=18)

               aaCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaa                                                               >  2:1480479/1‑93 (MQ=18)

               aaCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaa                                                               >  1:3382528/1‑93 (MQ=18)

                aCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaaa                                                              <  1:2691855/93‑1 (MQ=21)

                aCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaaa                                                              <  2:7517810/93‑1 (MQ=18)

                 cGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAAt                                                             >  2:6560088/1‑93 (MQ=18)

                   gggAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGc                                                           <  1:7729924/93‑1 (MQ=21)

                      ggcagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGcaca                                                        <  1:6065235/92‑1 (MQ=18)

                      agcagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGccca                                                        >  1:8089907/1‑93 (MQ=16)

                      agcagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGcaca                                                        <  2:9705371/93‑1 (MQ=21)

                      agcagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGcaca                                                        <  1:5167223/93‑1 (MQ=18)

                      agcagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGcaca                                                        <  2:3867557/93‑1 (MQ=18)

                       gcagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACAt                                                       <  1:4258044/93‑1 (MQ=18)

                       gcagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACAt                                                       >  2:9336840/1‑93 (MQ=18)

                        cagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATg                                                      >  1:4419246/1‑93 (MQ=18)

                          gcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGTCCCGTACACAAAAATGCACATGCt                                                    <  1:5942076/93‑1 (MQ=255)

                          gcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCt                                                    >  2:7859113/1‑93 (MQ=18)

                          gcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCt                                                    <  1:649282/93‑1 (MQ=18)

                           cccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtg                                                   <  2:9082865/93‑1 (MQ=18)

                           cccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtg                                                   <  2:4199886/93‑1 (MQ=21)

                           cccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtg                                                   >  1:1396474/1‑93 (MQ=18)

                            ctatagCTTGAATCAGTGTGTTTTTTAGTGGAAGCGTCTGGATAGGCGTGCGATACAGTGTTGCTGCCCTGTACATAAAAATGCACATGCtgt                                                  >  2:9234155/5‑93 (MQ=11)

                              agagCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGa                                                >  1:4750917/1‑93 (MQ=18)

                              agagCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGa                                                >  1:8786830/1‑93 (MQ=18)

                                agCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGc                                              >  1:1509593/1‑93 (MQ=18)

                                 gCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCATCCCCGTACACAAACATGCACATGCTGTGAgat                                             >  2:1432933/1‑91 (MQ=11)

                                 gCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCt                                             >  1:2208431/1‑93 (MQ=18)

                                  ccTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTc                                            <  1:6169945/93‑1 (MQ=18)

                                   cTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                           <  1:9540383/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  1:1130975/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          >  1:8505326/1‑93 (MQ=21)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  2:5757084/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          >  2:5877642/1‑93 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  2:6649836/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          >  2:8552270/1‑93 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          >  1:5345966/1‑93 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  1:7498420/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          >  1:5568382/1‑93 (MQ=33)

                                      aaTCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATg                                        <  1:9159248/93‑1 (MQ=18)

                                      aaTCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATg                                        >  1:6638190/1‑93 (MQ=18)

                                       aTCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGa                                       <  1:3144279/93‑1 (MQ=18)

                                        tCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAg                                      <  2:5985335/93‑1 (MQ=18)

                                        tCAGTGAGTGTGTTAGTGGAAGCGCCTGGAAAGGCGTGCGATACAGGGTGGCACCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAg                                      >  2:313913/1‑93 (MQ=11)

                                         cAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGt                                     <  1:3721775/93‑1 (MQ=18)

                                          aGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTa                                    <  1:872323/93‑1 (MQ=18)

                                          aGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTa                                    <  1:1590547/93‑1 (MQ=18)

                                          aGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTa                                    <  2:5120118/93‑1 (MQ=18)

                                           gtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAg                                   <  2:6194600/93‑1 (MQ=18)

                                           gtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAg                                   >  1:9890062/1‑93 (MQ=18)

                                            tgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAgg                                  <  2:1714650/93‑1 (MQ=18)

                                             gtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAggg                                 >  1:8871456/1‑93 (MQ=18)

                                             gtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAggg                                 <  1:2260683/93‑1 (MQ=18)

                                             gtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAggg                                 <  1:1730346/93‑1 (MQ=18)

                                                   gtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                           >  1:2022409/1‑93 (MQ=18)

                                                   gtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                           >  1:995162/1‑93 (MQ=18)

                                                   gtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                           >  2:9545851/1‑93 (MQ=18)

                                                    ttAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGaca                          <  1:6747801/93‑1 (MQ=18)

                                                      aGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACg                        <  2:3618073/93‑1 (MQ=18)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                       >  1:824352/1‑93 (MQ=21)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                       <  1:8037851/93‑1 (MQ=18)

                                                       gTGAAAGCGTCTGGAACGGCGTGCAATACAGGGTGGCAGTCCCGTACACAAAAATGCACATGCTGTGAGCACGATGAGTAGGGCGGGACACGt                       <  2:1942241/93‑1 (MQ=11)

                                                        tGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg                      >  1:2308103/1‑93 (MQ=18)

                                                         ggAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTgg                     >  2:3764556/1‑93 (MQ=18)

                                                         ggAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTgg                     >  1:6944617/1‑93 (MQ=21)

                                                          gAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGt                    <  2:3369434/93‑1 (MQ=18)

                                                          gAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGt                    <  2:2722747/93‑1 (MQ=18)

                                                          gAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGt                    >  2:7686038/1‑93 (MQ=18)

                                                          gAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGt                    <  1:3448917/93‑1 (MQ=18)

                                                          gAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGt                    >  2:6828412/1‑93 (MQ=18)

                                                           aaGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTa                   <  1:567955/93‑1 (MQ=18)

                                                           aaGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTa                   <  2:204020/93‑1 (MQ=18)

                                                            aGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAt                  >  2:847154/1‑93 (MQ=18)

                                                            aGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAt                  <  1:1323359/93‑1 (MQ=18)

                                                            aGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAt                  <  2:1195421/93‑1 (MQ=18)

                                                              cGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATcc                <  1:4028527/93‑1 (MQ=18)

                                                              cGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATcc                <  1:7957384/93‑1 (MQ=18)

                                                              cGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATcc                <  1:4050654/93‑1 (MQ=18)

                                                               gTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCt               >  2:1177650/1‑93 (MQ=18)

                                                                tCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTg              >  2:1893927/1‑93 (MQ=18)

                                                                 cTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATTCTgg             >  2:4487967/1‑92 (MQ=255)

                                                                  tGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc            >  1:3052217/1‑93 (MQ=18)

                                                                  tGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc            >  1:9691447/1‑93 (MQ=21)

                                                                   ggAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCt           >  2:5365566/1‑93 (MQ=18)

                                                                   ggAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCt           >  1:2079836/1‑93 (MQ=18)

                                                                      aaGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGaa        >  1:4545034/1‑93 (MQ=18)

                                                                      aaGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGaa        >  2:4629544/1‑93 (MQ=18)

                                                                       aGGCGTGCGATACAGGGTGGCAGCGCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTATGGCGCGTCACGTGGTATCCTGTCTGAat       <  1:5284147/93‑1 (MQ=11)

                                                                       aGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAat       <  2:2201189/93‑1 (MQ=18)

                                                                            tGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATggg  <  2:8770094/93‑1 (MQ=14)

CAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG  >  NC_000913/4035338‑4035506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`