Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,075,942 T→C V305A (GTG→GCG)  yiiD → putative acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,075,9420TC93.5% 948.0 / 40.0 343V305A (GTG→GCG) yiiDputative acetyltransferase
Reads supporting (aligned to +/- strand):  ref base T (7/15);  new base C (115/204);  total (123/220)
Fisher's exact test for biased strand distribution p-value = 8.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.75e-01

Only 100 of 362 total aligned reads displayed.

TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG  >  NC_000913/4075851‑4076032
                                                                                           |                                                                                          
ttAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAgtg                                                                                           <  1:4469911/93‑1 (MQ=255)
 tAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAgcgt                                                                                          <  2:946491/93‑1 (MQ=255)
 tAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAgcgt                                                                                          >  1:9402020/1‑93 (MQ=255)
   aGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGATACGCCGGGTGCAGCGttt                                                                                        <  2:8682507/93‑1 (MQ=255)
     cggcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGa                                                                                      <  1:8623418/93‑1 (MQ=255)
     cggcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGa                                                                                      <  1:5218426/93‑1 (MQ=255)
     cggcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGa                                                                                      <  2:7568689/93‑1 (MQ=255)
       gcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAg                                                                                    <  1:9056781/93‑1 (MQ=255)
        ggATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAgg                                                                                   <  1:3509740/92‑1 (MQ=255)
        cgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAgg                                                                                   >  1:1053469/1‑93 (MQ=255)
          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 >  2:7904520/1‑93 (MQ=255)
          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 <  2:7123152/93‑1 (MQ=255)
          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 <  1:1724565/93‑1 (MQ=255)
          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 >  2:3999945/1‑93 (MQ=255)
           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAc                                                                                >  2:8800061/1‑93 (MQ=255)
           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAc                                                                                <  2:3329390/93‑1 (MQ=255)
           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAc                                                                                <  1:2037682/93‑1 (MQ=255)
           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTATGAAGGCAc                                                                                >  1:9655176/1‑93 (MQ=255)
            ctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACg                                                                               <  2:6951557/93‑1 (MQ=255)
             tcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGt                                                                              <  2:7666137/93‑1 (MQ=255)
               gACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGtat                                                                            <  1:3216313/93‑1 (MQ=255)
                aCCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGtata                                                                           >  1:8027759/1‑93 (MQ=255)
                   gTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCg                                                                        <  1:1219740/93‑1 (MQ=255)
                   gTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCg                                                                        <  1:2869531/93‑1 (MQ=255)
                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGaa                                                                                     >  1:1180104/1‑79 (MQ=255)
                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGaa                                                                                     <  2:1180104/79‑1 (MQ=255)
                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGt                                                                       <  2:1522914/93‑1 (MQ=255)
                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGt                                                                       >  2:4271198/1‑93 (MQ=255)
                      tGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTc                                                                     <  1:6811748/93‑1 (MQ=255)
                       tgcgcgcGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCGTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCt                                                                    <  1:2559306/92‑1 (MQ=255)
                       ggCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGTGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCt                                                                    <  2:6101612/93‑1 (MQ=255)
                        gcgcgcGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTg                                                                   >  1:1351984/1‑93 (MQ=255)
                          gcgcgGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGcc                                                                 <  1:7078059/93‑1 (MQ=255)
                             cgGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCcgt                                                              >  1:6079198/1‑92 (MQ=255)
                             cgGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCcgc                                                              <  1:2639927/93‑1 (MQ=255)
                              ggACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCcgcg                                                             >  1:8837276/1‑93 (MQ=255)
                                aCGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGaa                                                           >  1:7858935/1‑93 (MQ=255)
                                  gAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGc                                                         <  1:6353245/93‑1 (MQ=255)
                                  gAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGc                                                         <  2:8464416/93‑1 (MQ=255)
                                   aaaaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGcc                                                        >  2:2898491/1‑93 (MQ=255)
                                    aaaGCAGGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCa                                                       <  1:234538/93‑1 (MQ=255)
                                    aaaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATTGTTCTGCCCGCGAAGCCa                                                       <  2:8084837/93‑1 (MQ=255)
                                    aaaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCa                                                       >  2:2366915/1‑93 (MQ=255)
                                     aaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAt                                                      <  2:4385915/93‑1 (MQ=255)
                                     aaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAt                                                      >  2:3427716/1‑93 (MQ=255)
                                      aGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCCTTCTGCCCGCGAAGCCAtt                                                     <  1:6441041/93‑1 (MQ=255)
                                      aGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAtt                                                     <  1:9837055/93‑1 (MQ=255)
                                      aGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAtt                                                     <  1:6524785/93‑1 (MQ=255)
                                       gCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAttt                                                    <  2:3555958/93‑1 (MQ=255)
                                       gCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAttt                                                    >  1:7927499/1‑93 (MQ=255)
                                       gCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAttt                                                    <  2:2612253/93‑1 (MQ=255)
                                         aCGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTgg                                                  >  2:6643443/1‑93 (MQ=255)
                                         aCGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTgg                                                  >  1:4612944/1‑93 (MQ=255)
                                          cGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGc                                                 >  1:7725864/1‑93 (MQ=255)
                                          cGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGc                                                 <  1:5372084/93‑1 (MQ=255)
                                            ggTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGccc                                               <  1:3993520/93‑1 (MQ=255)
                                             gTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCg                                              <  1:8217591/93‑1 (MQ=255)
                                             gTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGAACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCg                                              >  1:6909020/1‑93 (MQ=255)
                                               gCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTa                                            <  2:2807660/93‑1 (MQ=255)
                                               gCAGACGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTa                                            <  2:2138471/93‑1 (MQ=255)
                                                cAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTAt                                           <  1:9314835/93‑1 (MQ=255)
                                                 aGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATg                                          <  1:7611400/93‑1 (MQ=255)
                                                 aGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATg                                          <  2:4804161/93‑1 (MQ=255)
                                                  gATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGa                                         >  1:10002134/1‑93 (MQ=255)
                                                   aTGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGaa                                        <  2:5097665/93‑1 (MQ=255)
                                                    tGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAag                                       <  2:904829/93‑1 (MQ=255)
                                                    tGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAag                                       <  1:4166115/93‑1 (MQ=255)
                                                    tGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAag                                       >  1:5067696/1‑93 (MQ=255)
                                                     gCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAaga                                      <  1:5673373/93‑1 (MQ=255)
                                                      cAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAagag                                     <  1:5839497/93‑1 (MQ=255)
                                                        ggTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAggg                                   >  1:4952191/1‑93 (MQ=255)
                                                         gTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGc                                  >  2:5774243/1‑93 (MQ=255)
                                                           cGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCgg                                <  2:8239114/93‑1 (MQ=255)
                                                           cGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCgg                                >  2:5306319/1‑93 (MQ=255)
                                                             aaaTCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGa                              >  2:3044486/1‑93 (MQ=255)
                                                             aaaGCTTGGGCGACGAGACGTCGTGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGGATGAAGAGGGCGGGa                              <  2:4201370/93‑1 (MQ=255)
                                                              aaTCTTTGGCGACGAGACGCCGGTTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGaa                             <  2:6874153/93‑1 (MQ=255)
                                                              aaTCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGaa                             <  2:1237089/93‑1 (MQ=255)
                                                                 cTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACga                          >  2:5958255/1‑93 (MQ=255)
                                                                  tgtGGCGACGTGCCGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACgaa                         <  1:7129270/91‑1 (MQ=255)
                                                                   ttGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACgaag                        >  2:3864241/1‑93 (MQ=255)
                                                                     ggCGACGAGACGCCGGGTGAAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACgaagaa                      <  1:8433654/93‑1 (MQ=255)
                                                                      gCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGaagaag                     <  1:1879922/93‑1 (MQ=255)
                                                                       cgacgaGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAagaaga                    <  2:6292384/93‑1 (MQ=255)
                                                                        gacgaGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAagag                   <  1:7549987/93‑1 (MQ=255)
                                                                         acgaGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGt                  >  2:9712412/1‑93 (MQ=255)
                                                                         acgaGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGt                  >  1:7054635/1‑93 (MQ=255)
                                                                          cgaGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTa                 <  1:8866270/93‑1 (MQ=255)
                                                                            agaCGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGc               >  2:5489220/1‑93 (MQ=255)
                                                                             gaCGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCt              <  2:2031891/93‑1 (MQ=255)
                                                                               cGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGa            <  2:2537753/93‑1 (MQ=255)
                                                                               cGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGa            <  1:3719798/93‑1 (MQ=255)
                                                                                ggcGGGTGAAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGAt           <  2:1810109/91‑1 (MQ=255)
                                                                                gCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGAt           <  2:1609275/93‑1 (MQ=255)
                                                                                 ccGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATg          <  1:7395767/93‑1 (MQ=255)
                                                                                   gggTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGga        >  1:5424511/1‑93 (MQ=255)
                                                                                    ggTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGgag       >  2:9365854/1‑93 (MQ=255)
                                                                                     gtccAGCGTTTGAAGGCCCGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGgaga      <  1:9505714/90‑1 (MQ=255)
                                                                                       gCAGCGTTTGAAGGCTCGTATATCGTTCTGCCCGCGAAGCTATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAgg    <  1:8330863/93‑1 (MQ=255)
                                                                                        cAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAggg   <  1:4344274/93‑1 (MQ=255)
                                                                                           |                                                                                          
TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG  >  NC_000913/4075851‑4076032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: