BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	531,453	T→C	intergenic (‑8/‑222)	ybbS ← / → ybbT	putative transcriptional regulator LYSR‑type/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	531,453	0	T	C	100.0%	1416.9 / NA	432	intergenic (‑8/‑222)	ybbS/ybbT	putative transcriptional regulator LYSR‑type/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (234/198); total (234/198)

Only 100 of 440 total aligned reads displayed.

TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACTAAA  >  NC_000913/531363‑531545

ttACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCAt                                                                                            >  2:6606964/1‑93 (MQ=255)

 tACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATc                                                                                           >  1:7804648/1‑93 (MQ=255)

 tACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATc                                                                                           >  2:4771354/1‑93 (MQ=255)

 tACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATc                                                                                           >  2:7909272/1‑93 (MQ=255)

 tACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATc                                                                                           >  1:2585098/1‑93 (MQ=255)

 tACATAATCGGTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATc                                                                                           <  1:7082461/93‑1 (MQ=255)

     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                       <  2:9697345/93‑1 (MQ=255)

     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                       >  2:6957911/1‑93 (MQ=255)

        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                    >  1:5882887/1‑93 (MQ=255)

        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                    <  2:5338560/93‑1 (MQ=255)

             cTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATc                                                                               <  1:9212727/93‑1 (MQ=255)

              tGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGCAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATcc                                                                              >  1:1436460/1‑93 (MQ=255)

              tGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATcc                                                                              >  2:1528381/1‑93 (MQ=255)

               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                             >  1:1257448/1‑93 (MQ=255)

               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                             <  1:5233369/93‑1 (MQ=255)

               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                             >  2:137324/1‑93 (MQ=255)

                ccGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGc                                                                            <  2:7501651/93‑1 (MQ=255)

                  gCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCag                                                                          >  1:1821512/1‑92 (MQ=255)

                   cTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAg                                                                         <  1:6754080/93‑1 (MQ=255)

                    ttttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGt                                                                        <  2:2062273/93‑1 (MQ=255)

                    ttttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGt                                                                        >  1:3779197/1‑93 (MQ=255)

                    ttttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGt                                                                        >  1:5049579/1‑93 (MQ=255)

                     tttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGtt                                                                       <  1:6948026/93‑1 (MQ=255)

                      ttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTg                                                                      <  1:7365453/93‑1 (MQ=255)

                        gAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCg                                                                    >  2:3799277/1‑93 (MQ=255)

                        gAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCg                                                                    >  2:6937137/1‑93 (MQ=255)

                          aaaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTg                                                                  >  2:2613714/1‑93 (MQ=255)

                          aaaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTg                                                                  <  2:1115017/93‑1 (MQ=255)

                          aaaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTg                                                                  >  2:3056382/1‑93 (MQ=255)

                           aaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGa                                                                 >  2:5907678/1‑93 (MQ=255)

                            aaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAt                                                                >  2:3596237/1‑93 (MQ=255)

                               ttCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAtttt                                                             >  1:7755998/1‑93 (MQ=255)

                                tCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGTATCGAACATCTTCAGGCATCTCCTTTTAAATCCGCAAGTTTCGTGATTTTc                                                            >  2:8936136/1‑93 (MQ=255)

                                tCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTc                                                            <  2:9899032/93‑1 (MQ=255)

                                tCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTc                                                            >  1:9981348/1‑93 (MQ=255)

                                 ccTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCt                                                           <  1:7290264/93‑1 (MQ=255)

                                  cTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCtt                                                          <  1:8059575/93‑1 (MQ=255)

                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                         >  2:8169767/1‑93 (MQ=255)

                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                         <  2:9205551/93‑1 (MQ=255)

                                    gTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTAt                                                        >  1:6381806/1‑93 (MQ=255)

                                    gTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTAt                                                        <  1:39009/93‑1 (MQ=255)

                                     tttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATc                                                       <  1:468672/93‑1 (MQ=255)

                                     tttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATc                                                       <  1:3635116/93‑1 (MQ=255)

                                         aGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctct                                                   >  2:9280447/1‑93 (MQ=255)

                                           cAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGa                                                 <  2:9503832/93‑1 (MQ=255)

                                            aaCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAt                                                <  1:759434/93‑1 (MQ=255)

                                            aaCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAt                                                >  1:8145726/1‑93 (MQ=255)

                                            aaCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAt                                                <  2:4239089/93‑1 (MQ=255)

                                             aCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCTGCAAGTTGCGTGATTTTCTTATCCTCTGAtt                                               <  2:5463038/93‑1 (MQ=255)

                                             aCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAtt                                               >  2:2544122/1‑93 (MQ=255)

                                             aCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAtt                                               >  1:5748842/1‑93 (MQ=255)

                                             aCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAtt                                               <  1:6033902/93‑1 (MQ=255)

                                               cGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTa                                             <  1:3842378/93‑1 (MQ=255)

                                               cGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTa                                             >  2:2899216/1‑93 (MQ=255)

                                                gCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTAt                                            >  1:6103033/1‑93 (MQ=255)

                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGGTTTTCTTATCCTCTGATTTATc                                           >  2:6362793/1‑93 (MQ=255)

                                                  aaTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCa                                          >  1:3528614/1‑93 (MQ=255)

                                                   aTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAg                                         <  2:1964571/93‑1 (MQ=255)

                                                    tGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGt                                        <  2:7708369/93‑1 (MQ=255)

                                                     gAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGGGTGATTTTCTTATCCTCTGATTTATCAGTa                                       <  1:1611118/93‑1 (MQ=255)

                                                        aGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttt                                    <  1:2185192/93‑1 (MQ=255)

                                                        aGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttt                                    >  1:3404299/1‑93 (MQ=255)

                                                        aGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttt                                    <  1:5535285/93‑1 (MQ=255)

                                                        aGTCCGCAAGGTTTCTGGATCGAACATCATCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttt                                    <  1:293708/93‑1 (MQ=255)

                                                         gTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtttt                                   <  1:2753884/93‑1 (MQ=255)

                                                          tCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttttt                                  <  1:1122760/93‑1 (MQ=255)

                                                            cGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTAc                                <  1:8952075/93‑1 (MQ=255)

                                                             gCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACa                               >  1:4302905/1‑93 (MQ=255)

                                                             gCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACa                               >  2:5055078/1‑93 (MQ=255)

                                                             gCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACa                               <  2:4918692/93‑1 (MQ=255)

                                                             gCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACa                               <  2:868722/93‑1 (MQ=255)

                                                              cgaGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGCGATTTTCTTCTCTTATGATTGATCAGTCTTTTTACAt                              >  1:1509854/3‑93 (MQ=255)

                                                              cAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACAt                              >  2:6162520/1‑93 (MQ=255)

                                                              cAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAATTTCTTATCCTCTGATTTATCAGTATTTTTACAt                              >  2:8405693/1‑93 (MQ=255)

                                                               aaGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATg                             >  2:4833197/1‑93 (MQ=255)

                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                            <  2:3930739/93‑1 (MQ=255)

                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                            <  2:1796264/93‑1 (MQ=255)

                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                            >  2:1876856/1‑93 (MQ=255)

                                                                  gTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATa                          >  2:2335830/1‑93 (MQ=255)

                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                        <  2:3373255/93‑1 (MQ=255)

                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                        >  2:5699949/1‑93 (MQ=255)

                                                                      cTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAccc                      <  1:6606965/93‑1 (MQ=255)

                                                                      cTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAccc                      <  1:3027804/93‑1 (MQ=255)

                                                                      cTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAccc                      <  2:5581101/93‑1 (MQ=255)

                                                                       tGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                     <  2:3217483/93‑1 (MQ=255)

                                                                       tGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                     <  2:606159/93‑1 (MQ=255)

                                                                        ggATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTg                    >  2:8327632/1‑93 (MQ=255)

                                                                          aTCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGtt                  >  2:7210052/1‑93 (MQ=255)

                                                                           tCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTc                 >  1:4207541/1‑93 (MQ=255)

                                                                               aCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAtt             >  2:4621309/1‑93 (MQ=255)

                                                                               aCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAtt             >  1:4388464/1‑93 (MQ=255)

                                                                                 aTCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtg           >  2:4550864/1‑93 (MQ=255)

                                                                                 aTCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtg           >  1:8494735/1‑93 (MQ=255)

                                                                                  tCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt          <  1:2485343/93‑1 (MQ=255)

                                                                                  tCTGCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt          <  1:9715693/93‑1 (MQ=255)

                                                                                    ttCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTgg        >  1:1006754/1‑93 (MQ=255)

                                                                                     tCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGa       <  1:8861562/93‑1 (MQ=255)

                                                                                      cAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGAc      <  2:8545948/93‑1 (MQ=255)

                                                                                       aGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACt     <  2:3660296/93‑1 (MQ=255)

                                                                                          tATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACTaaa  <  1:9837906/93‑1 (MQ=255)

TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACTAAA  >  NC_000913/531363‑531545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`