Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,437,861 A→G V311A (GTG→GCG)  ytfL ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,437,8610AG99.2% 1096.4 / ‑5.8 364V311A (GTG→GCG) ytfLputative transport protein
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base G (215/143);  total (217/147)
Fisher's exact test for biased strand distribution p-value = 5.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 378 total aligned reads displayed.

AGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCACCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGAATTTGT  >  NC_000913/4437771‑4437950
                                                                                          |                                                                                         
 gCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCcg                                                                                        >  1:8288555/1‑93 (MQ=255)
    ccTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCgaga                                                                                     >  1:5064524/1‑93 (MQ=255)
     cTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGaa                                                                                    <  1:6753636/93‑1 (MQ=255)
     cTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGaa                                                                                    <  2:8866459/93‑1 (MQ=255)
     cTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGaa                                                                                    >  1:4296836/1‑93 (MQ=255)
       gaccgaccAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGt                                                                                  >  2:8427671/1‑93 (MQ=255)
        accgaccAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAggc                                                                                 >  1:223970/1‑91 (MQ=255)
        accgaccAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTc                                                                                 >  2:9230276/1‑93 (MQ=255)
        accgaccAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCACCGCGAAGTc                                                                                 >  2:5321049/1‑93 (MQ=255)
           gaccAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTc                                                                              <  2:1919550/93‑1 (MQ=255)
            accAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCa                                                                             >  2:3137645/1‑93 (MQ=255)
            accAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCa                                                                             >  2:1467354/1‑93 (MQ=255)
            accAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCa                                                                             >  1:8229758/1‑93 (MQ=255)
            accAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCa                                                                             >  1:2527247/1‑93 (MQ=255)
              cAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGACGTCTTCAcc                                                                           >  2:7129750/1‑93 (MQ=255)
              cAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCAcc                                                                           <  1:1452757/93‑1 (MQ=255)
              cAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCAcc                                                                           <  1:5990622/93‑1 (MQ=255)
               aGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCt                                                                          <  2:3836010/93‑1 (MQ=255)
               aGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCt                                                                          >  1:835300/1‑93 (MQ=255)
               aGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCt                                                                          <  2:6526799/93‑1 (MQ=255)
                gATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTg                                                                         >  2:4288969/1‑93 (MQ=255)
                 aTCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGc                                                                        >  2:7455648/1‑93 (MQ=255)
                  tCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCg                                                                       <  1:9795795/93‑1 (MQ=255)
                   cGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCgg                                                                      <  2:3943380/93‑1 (MQ=255)
                      ccATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGttt                                                                   <  1:3671041/93‑1 (MQ=255)
                       cATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGtttt                                                                  >  2:8582830/1‑93 (MQ=255)
                       cATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGtttt                                                                  >  2:6308060/1‑93 (MQ=255)
                       cATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGtttt                                                                  >  1:1605630/1‑93 (MQ=255)
                        aTCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTa                                                                 <  1:1343460/93‑1 (MQ=255)
                        aTCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTa                                                                 >  1:2755843/1‑93 (MQ=255)
                        aTCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTAACCTGCGGTTTTa                                                                 >  1:3211154/1‑93 (MQ=255)
                         tCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTaa                                                                >  2:7834237/1‑93 (MQ=255)
                         tCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTaa                                                                >  1:9303494/1‑93 (MQ=255)
                          cAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTaaa                                                               >  2:8351626/1‑93 (MQ=255)
                           aGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTaaaa                                                              >  1:1235402/1‑93 (MQ=255)
                           aGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTaaaa                                                              <  1:4738650/93‑1 (MQ=255)
                             cGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACt                                                            <  1:934448/93‑1 (MQ=255)
                              gTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACtt                                                           <  1:1893101/93‑1 (MQ=255)
                              gTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACtt                                                           >  2:2323106/1‑93 (MQ=255)
                                 gTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTcc                                                        >  1:8459575/1‑93 (MQ=255)
                                 gTCATCACGTCATTGAGGGTGATCATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTcc                                                        <  2:5580638/93‑1 (MQ=255)
                                  tcatcaCGTCATTGAGGGTGATGATCCCCTCCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCa                                                       <  1:4124263/93‑1 (MQ=255)
                                  tcatcaCGCCATTGAGGGTGATGATCCCCCCCACCAGCGCGTACAAGTTCATGATCACCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCa                                                       <  2:5809991/93‑1 (MQ=255)
                                   catcaCGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCTCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCaa                                                      <  1:9263211/93‑1 (MQ=255)
                                   catcaCGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCaa                                                      <  1:796185/93‑1 (MQ=255)
                                   catcaCGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCaa                                                      >  1:6603929/1‑93 (MQ=255)
                                      caCGTCATTGAGGGTGATGATCCCCACCGCCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGc                                                   <  1:5544239/93‑1 (MQ=255)
                                      caCGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGc                                                   <  1:337453/93‑1 (MQ=255)
                                      caCGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGc                                                   >  2:1261063/1‑93 (MQ=255)
                                      caCGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGc                                                   >  1:5433126/1‑93 (MQ=255)
                                      caCGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGc                                                   <  1:8603357/93‑1 (MQ=255)
                                         gTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCctc                                                >  1:7336900/1‑93 (MQ=255)
                                         gTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCctc                                                >  2:4913757/1‑93 (MQ=255)
                                          tCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCctct                                               >  2:5231040/1‑93 (MQ=255)
                                          tCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCctct                                               >  1:185562/1‑93 (MQ=255)
                                          tCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCctct                                               <  2:2198673/93‑1 (MQ=255)
                                           cATTGAGGGCAATCATCCCCACCACCAGCGGGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTg                                              <  2:2552511/93‑1 (MQ=255)
                                            aTTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGa                                             >  2:9685825/1‑93 (MQ=255)
                                            aTTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGa                                             >  1:5171927/1‑93 (MQ=255)
                                             ttGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGaa                                            >  1:908754/1‑93 (MQ=255)
                                              tGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGaaa                                           >  2:5065982/1‑93 (MQ=255)
                                              tGAGGGTGAGGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCGGCGGTTTTAAAACTTTCCAACGCCTCTGaaa                                           <  1:3694845/93‑1 (MQ=255)
                                                aGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAgg                                         >  2:9435509/1‑93 (MQ=255)
                                                aGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAgg                                         >  2:9784196/1‑93 (MQ=255)
                                                aGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAgg                                         <  1:6742615/93‑1 (MQ=255)
                                                 gggTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAggg                                        >  1:5823768/1‑93 (MQ=255)
                                                   gTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGtt                                      <  1:9580472/93‑1 (MQ=255)
                                                    tgatgaTCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTa                                     <  1:9482945/93‑1 (MQ=255)
                                                     gatgatCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTaa                                    <  1:4471950/93‑1 (MQ=255)
                                                       tgatCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCCCCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACg                                  <  2:7584646/93‑1 (MQ=255)
                                                        gatCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGt                                 >  2:677791/1‑93 (MQ=255)
                                                          tCCCCACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTAt                               >  1:6355678/1‑93 (MQ=255)
                                                           ccccACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATc                              >  2:2653945/1‑93 (MQ=255)
                                                           ccccACCACCAGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATc                              <  2:8741221/93‑1 (MQ=255)
                                                              caccaccaGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCgg                           <  2:9547749/93‑1 (MQ=255)
                                                              caccaccaGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCgg                           >  2:6146812/1‑93 (MQ=255)
                                                                ccaccaGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGca                         >  2:10037948/1‑93 (MQ=255)
                                                                ccaccaGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGca                         >  2:3112066/1‑93 (MQ=255)
                                                                 caccaGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGcac                        >  1:4047835/1‑93 (MQ=255)
                                                                   ccaGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACaa                      >  1:5719213/1‑93 (MQ=255)
                                                                   ccaGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACaa                      >  1:4654425/1‑93 (MQ=255)
                                                                     aGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATc                    <  1:7647831/93‑1 (MQ=255)
                                                                     aGCGCGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATc                    <  2:7314061/93‑1 (MQ=255)
                                                                      gcgcGTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCa                   <  2:6666240/93‑1 (MQ=255)
                                                                         cgTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCg                <  2:370679/93‑1 (MQ=255)
                                                                          gTACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCgt               <  2:478814/93‑1 (MQ=255)
                                                                           tACTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCgtg              >  2:1694567/1‑93 (MQ=255)
                                                                            aCTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCgtgt             >  2:1165296/1‑93 (MQ=255)
                                                                             cTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCTGGCACAATCAGCGTGtt            >  1:2089365/1‑93 (MQ=255)
                                                                             cTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGtt            <  2:4640887/93‑1 (MQ=255)
                                                                             cTCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATACGGCACAATCAGCGTGtt            >  2:3226565/1‑93 (MQ=255)
                                                                              tCGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTg           >  1:30768/1‑93 (MQ=255)
                                                                               cGTTCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGc          <  2:2807165/93‑1 (MQ=255)
                                                                                 ttCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGa        <  1:8664972/93‑1 (MQ=255)
                                                                                 ttCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAAAGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGa        >  2:2067556/1‑93 (MQ=255)
                                                                                 ttCATGATCGCCGCGAAGTCTTCACCTGCGGGTTTAAAACTTTCCAACGCCTCTGAAAAGGTTAACGTATCCGGCACAATCAGCGTGTTGCGa        >  2:3413511/1‑93 (MQ=255)
                                                                                  tCATGATCTCCGCGAAGTCTTCACCTGCGGTTTTAAAGCTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGaa       <  2:793293/93‑1 (MQ=255)
                                                                                  tCATGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGaa       <  1:4248971/93‑1 (MQ=255)
                                                                                     tGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGAAttt    >  1:6965853/1‑93 (MQ=255)
                                                                                     tGATCGCCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGAAttt    >  2:2964527/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGATCCCCACCACCAGCGCGTACTCGTTCATGATCACCGCGAAGTCTTCACCTGCGGTTTTAAAACTTTCCAACGCCTCTGAAAGGGTTAACGTATCCGGCACAATCAGCGTGTTGCGAATTTGT  >  NC_000913/4437771‑4437950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: