BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,444,690	T→C	V1001A (GTA→GCA)	ytfN →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,444,690	0	T	C	100.0%	965.9 / NA	301	V1001A (GTA→GCA)	ytfN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/167); total (134/167)

Only 100 of 318 total aligned reads displayed.

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag                                                                                         <  2:4045845/93‑1 (MQ=255)

 cGAGGCTACACCAACCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAgg                                                                                        <  1:1995600/93‑1 (MQ=255)

  gAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGc                                                                                       >  1:589836/1‑93 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      >  2:411539/1‑93 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      <  2:9129675/93‑1 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      >  2:3174722/1‑93 (MQ=255)

    ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt                                                                                     >  1:4579741/1‑93 (MQ=255)

     gCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtc                                                                                    <  2:4492303/93‑1 (MQ=255)

       tACACCAACCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  <  2:359952/93‑1 (MQ=255)

       tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  <  1:5286462/93‑1 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 >  1:5960057/1‑93 (MQ=255)

         cacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCa                                                                                >  2:3465928/1‑93 (MQ=255)

         cacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCa                                                                                <  2:322594/93‑1 (MQ=255)

          cccAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg                                                                               <  2:8849462/92‑1 (MQ=255)

           ccAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGc                                                                              >  1:7961022/1‑93 (MQ=255)

           ccAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGc                                                                              >  2:7628014/1‑93 (MQ=255)

            cAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCg                                                                             >  1:5038036/1‑93 (MQ=255)

             aaaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGa                                                                            >  2:1547703/1‑93 (MQ=255)

              aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt                                                                           <  1:2586154/93‑1 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          >  2:3099765/1‑93 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  2:5091368/93‑1 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  2:5557910/93‑1 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgtg                                                                        <  1:1278950/93‑1 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgtg                                                                        >  2:8744679/1‑93 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATATGCCGGAAAGCGCAGCAGGCGACTTCAACGAtgtg                                                                        >  2:8879013/1‑93 (MQ=255)

                  tGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtgg                                                                       <  1:4913271/93‑1 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      >  2:6742539/1‑93 (MQ=255)

                    tttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggtg                                                                     <  2:3821896/93‑1 (MQ=255)

                     tttcccTCGATGGTCGCGTGGATGTCCCTTGGTCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  1:2565058/90‑1 (MQ=255)

                     ttgcccTCGATGGGCGCGTGGATGTCCCTTGGGCGCGCAGCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  2:8539675/90‑1 (MQ=255)

                     ttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  2:4601038/93‑1 (MQ=255)

                       aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATg                                                                  >  1:3077361/1‑93 (MQ=255)

                       aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATg                                                                  >  1:7716787/1‑93 (MQ=255)

                            cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa                                                             <  1:477925/93‑1 (MQ=255)

                             gATGGTCCCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAc                                                            <  1:219977/93‑1 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          <  1:2804056/93‑1 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          <  1:2422100/93‑1 (MQ=255)

                                 gTCGTGTGTATGTCCCTTGGGCGCGCATCGTGGTGCATGATCTGCCGGAATGCGCATCAGGCGTCTCCAGCGATGTGGTGATGCGTAACGATa                                                        >  2:8934124/1‑93 (MQ=255)

                                 gTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATa                                                        <  1:8803352/93‑1 (MQ=255)

                                  gcgcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa                                                       <  1:732500/92‑1 (MQ=255)

                                    ggctGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGACAAcc                                                     <  2:8146139/90‑1 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc                                                     <  1:9981101/93‑1 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc                                                     <  1:3533507/93‑1 (MQ=255)

                                     cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCt                                                    <  2:2467515/93‑1 (MQ=255)

                                      gTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTg                                                   >  1:5646376/1‑93 (MQ=255)

                                        tcaTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCa                                                 <  2:206175/91‑1 (MQ=255)

                                         gATGTCCCTTGGGCACGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa                                                >  1:7450754/1‑93 (MQ=255)

                                          aTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAc                                               <  2:9289177/93‑1 (MQ=255)

                                           tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc                                              <  1:1047863/93‑1 (MQ=255)

                                           tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc                                              <  2:2189826/93‑1 (MQ=255)

                                            gTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCg                                             >  2:148476/1‑93 (MQ=255)

                                             tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg                                            >  1:1564649/1‑93 (MQ=255)

                                             tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCga                                            >  1:6900022/1‑92 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa                                          <  1:5480408/93‑1 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGaa                                          <  2:5981129/93‑1 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  1:9199935/1‑93 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  2:9444542/1‑93 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         <  2:6093810/93‑1 (MQ=255)

                                                 ctGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga                                        <  2:9819515/92‑1 (MQ=255)

                                                   gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc                                      <  1:6978605/93‑1 (MQ=255)

                                                       gcgcATCGTGGGGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaa                                  >  2:5863718/1‑93 (MQ=255)

                                                          cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               >  1:6516919/1‑93 (MQ=255)

                                                          cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               <  2:9526181/93‑1 (MQ=255)

                                                          cATCGTGGGGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               <  1:8600698/93‑1 (MQ=255)

                                                           aTCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACg                              <  2:6989501/93‑1 (MQ=255)

                                                           aTCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACg                              >  1:1919552/1‑93 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             >  1:8868686/1‑93 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             <  1:3814890/93‑1 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             >  1:2298723/1‑93 (MQ=255)

                                                               tggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGt                          >  1:2087335/1‑93 (MQ=255)

                                                               tggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGt                          <  2:3269430/93‑1 (MQ=255)

                                                                ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc                         >  1:7214085/1‑93 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       <  1:964935/93‑1 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       >  2:2941047/1‑93 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       <  1:1784122/93‑1 (MQ=255)

                                                                  tgCACGATCTGCCGAAAAGCGCAGCAGGCGTCTCCAGCGATGTGTTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAACCGGCGTCGa                       <  1:1110667/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTTGAt                      <  2:5312279/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt                      <  1:609503/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt                      <  1:8183710/93‑1 (MQ=255)

                                                                     aCGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGTCGATTc                    <  2:6538889/93‑1 (MQ=255)

                                                                        aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCgt                 >  1:5525732/1‑92 (MQ=255)

                                                                        aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCgc                 >  2:1905751/1‑92 (MQ=255)

                                                                         tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt                >  2:4826068/1‑93 (MQ=255)

                                                                         tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt                >  1:3387668/1‑93 (MQ=255)

                                                                           tGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTa              <  2:7201283/93‑1 (MQ=255)

                                                                            gCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTCCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTaa             <  1:3960329/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           <  1:9713974/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           <  2:112724/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           >  1:9286943/1‑93 (MQ=255)

                                                                               ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg          >  1:9089629/1‑93 (MQ=255)

                                                                               ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg          <  1:2941047/93‑1 (MQ=255)

                                                                                 aaaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTa        <  2:479287/93‑1 (MQ=255)

                                                                                  aaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTaa       >  1:359158/1‑93 (MQ=255)

                                                                                   aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      >  1:8478021/1‑93 (MQ=255)

                                                                                   aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      >  2:7810086/1‑93 (MQ=255)

                                                                                     cgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCt    <  2:1807813/93‑1 (MQ=255)

                                                                                     cgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCt    <  2:9708477/93‑1 (MQ=255)

                                                                                      gcagcaGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTg   <  2:6480153/93‑1 (MQ=255)

                                                                                       cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa  <  1:4233622/93‑1 (MQ=255)

                                                                                       cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa  <  1:1736248/93‑1 (MQ=255)

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`