Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 578,967 T→C intergenic (‑108/‑136) ybcV ← / → ybcW putative envelope protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913578,9670TC99.8% 1879.9 / NA 576intergenic (‑108/‑136)ybcV/ybcWputative envelope protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (288/287);  minor base G (1/0);  total (289/287)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 604 total aligned reads displayed.

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056
                                                                                          |                                                                                         
 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        >  2:9737614/1‑93 (MQ=255)
 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        <  2:8885792/93‑1 (MQ=255)
 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        <  1:6944895/93‑1 (MQ=255)
  aTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCgg                                                                                       >  1:4960826/1‑93 (MQ=255)
  aTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCgg                                                                                       >  2:1995608/1‑93 (MQ=255)
     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    <  2:3397677/93‑1 (MQ=255)
      ggTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCct                                                                                   <  2:3328202/93‑1 (MQ=255)
        tCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTATCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgc                                                                                 <  2:2124348/93‑1 (MQ=255)
          tggccTTTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGGATGTTTTCAATTAATAGTATTGGTTTCGTAAGAAAGCGCGGTCctgctg                                                                               <  1:8182751/90‑1 (MQ=255)
          tGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgctg                                                                               >  1:3877206/1‑93 (MQ=255)
           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              >  2:559265/1‑93 (MQ=255)
           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              <  2:8759554/93‑1 (MQ=255)
           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              >  1:596228/1‑93 (MQ=255)
             ccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCa                                                                            <  2:6568949/93‑1 (MQ=255)
             ccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCa                                                                            <  1:4269094/93‑1 (MQ=255)
              ctctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAt                                                                           >  2:7725626/1‑93 (MQ=255)
               tctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAtt                                                                          >  1:2952609/1‑93 (MQ=255)
                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGATTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  2:6852177/93‑1 (MQ=255)
                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  1:126769/93‑1 (MQ=255)
                 tttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCt                                                                        >  1:4748681/1‑93 (MQ=255)
                 tttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCt                                                                        <  2:5052165/93‑1 (MQ=255)
                  ttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTg                                                                       >  2:2818016/1‑93 (MQ=255)
                   tgtgTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTgg                                                                      >  2:1423405/1‑93 (MQ=255)
                   tgtgTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTgg                                                                      <  2:1498750/93‑1 (MQ=255)
                    gtgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     >  1:9364760/1‑93 (MQ=255)
                    gtgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     <  1:2239627/93‑1 (MQ=255)
                    gtgtTTTGTCGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     <  2:1075088/93‑1 (MQ=255)
                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  1:3313879/93‑1 (MQ=255)
                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  2:6925187/93‑1 (MQ=255)
                      gtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAgg                                                                   <  1:9164805/93‑1 (MQ=255)
                       ttttGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAggg                                                                  >  1:6412680/1‑93 (MQ=255)
                        tttGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGa                                                                 <  2:8196781/93‑1 (MQ=255)
                        tttGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGa                                                                 <  2:2999195/93‑1 (MQ=255)
                          tgttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGaaa                                                               <  1:2063245/93‑1 (MQ=255)
                             tgatgaTTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATAc                                                            <  1:8342238/93‑1 (MQ=255)
                             tgatgaTTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTACTGCTGGCATTCTGGAGGGAAATAc                                                            >  2:3644247/1‑93 (MQ=255)
                               atgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACaa                                                          <  1:6160622/93‑1 (MQ=255)
                                tgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                         <  2:9250872/93‑1 (MQ=255)
                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        <  1:3996760/93‑1 (MQ=255)
                                  atTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCg                                                       >  1:9932783/1‑93 (MQ=255)
                                  atTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCg                                                       >  1:7794294/1‑93 (MQ=255)
                                  atTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCg                                                       >  2:4706575/1‑93 (MQ=255)
                                  atTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCg                                                       <  1:1868167/93‑1 (MQ=255)
                                   tttATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGGTGGCATTCTGGAGGGAAATACAACCGa                                                      <  1:7604773/93‑1 (MQ=255)
                                   tttATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGa                                                      <  1:5504298/93‑1 (MQ=255)
                                       tGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAGCGACAGa                                                  >  2:5766014/1‑93 (MQ=255)
                                         tCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatg                                                <  1:7988996/93‑1 (MQ=255)
                                         tCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatg                                                <  1:7391705/93‑1 (MQ=255)
                                          cAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgt                                               <  1:6828018/93‑1 (MQ=255)
                                           aaaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgta                                              <  2:420054/93‑1 (MQ=255)
                                           aaaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgta                                              <  2:7125529/93‑1 (MQ=255)
                                              tatTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtatgt                                           >  2:7487750/1‑93 (MQ=255)
                                              tatTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtatgt                                           >  2:2629929/1‑93 (MQ=255)
                                              tatTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtatga                                           >  2:7994764/1‑92 (MQ=255)
                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGTAGGGAAATACAACCGACAGATGTATGTaa                                         <  1:2806626/93‑1 (MQ=255)
                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         >  1:2423206/1‑93 (MQ=255)
                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         >  1:10011792/1‑93 (MQ=255)
                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         >  2:8516869/1‑93 (MQ=255)
                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  1:1381441/93‑1 (MQ=255)
                                                  aGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAgg                                       >  2:4910083/1‑93 (MQ=255)
                                                   ggAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGc                                      >  2:7848705/1‑93 (MQ=255)
                                                    gAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGcc                                     >  1:8676505/1‑93 (MQ=255)
                                                    gAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGcc                                     >  1:7514159/1‑93 (MQ=255)
                                                      aTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCaa                                   <  2:2373032/93‑1 (MQ=255)
                                                      aTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCaa                                   >  2:5488202/1‑93 (MQ=255)
                                                      aTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCaa                                   >  2:9620851/1‑93 (MQ=255)
                                                        gTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACg                                 >  2:1795021/1‑93 (MQ=255)
                                                         ttttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGACATACAACCGACAGATGTATGTAAGGCCAACGt                                >  1:9519232/1‑93 (MQ=255)
                                                            tCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCt                             >  1:7248820/1‑93 (MQ=255)
                                                             cAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTc                            >  2:4064872/1‑93 (MQ=255)
                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          >  1:5325663/1‑93 (MQ=255)
                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         <  2:1346819/93‑1 (MQ=255)
                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         >  2:629767/1‑93 (MQ=255)
                                                                 tAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAc                        <  1:7206387/93‑1 (MQ=255)
                                                                 tAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAc                        <  1:891119/93‑1 (MQ=255)
                                                                 tAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAc                        <  2:5232176/93‑1 (MQ=255)
                                                                  aaTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAcc                       >  2:640846/1‑93 (MQ=255)
                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  1:3542981/1‑93 (MQ=255)
                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     >  1:4511819/1‑93 (MQ=255)
                                                                     aGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTc                    >  2:3822554/1‑93 (MQ=255)
                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  1:569761/1‑93 (MQ=255)
                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  2:4477035/1‑93 (MQ=255)
                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  1:375414/1‑93 (MQ=255)
                                                                        aTTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 >  2:7261195/1‑93 (MQ=255)
                                                                        aTTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 <  1:6602917/93‑1 (MQ=255)
                                                                         ttGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATAc                >  2:6696823/1‑93 (MQ=255)
                                                                            gTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGa             <  1:2693190/93‑1 (MQ=255)
                                                                                cGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGa         >  2:5939268/1‑93 (MQ=255)
                                                                                cGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGa         <  2:1625212/93‑1 (MQ=255)
                                                                                cGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGa         <  1:6551093/93‑1 (MQ=255)
                                                                                 gTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAt        >  1:697779/1‑93 (MQ=255)
                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       >  1:9711847/1‑93 (MQ=255)
                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       <  1:8795685/93‑1 (MQ=255)
                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       >  2:9043365/1‑93 (MQ=255)
                                                                                     cAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGa    <  1:251560/93‑1 (MQ=255)
                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATTCAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   >  2:8401958/1‑93 (MQ=255)
                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   <  2:4408468/93‑1 (MQ=255)
                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAg  <  1:5199368/93‑1 (MQ=255)
                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAg  >  2:6145925/1‑93 (MQ=255)
                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAg  <  1:3196053/93‑1 (MQ=255)
                                                                                          |                                                                                         
CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: