BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	592,232	C→T	R57Q (CGA→CAA)	nfrB ←	NfrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	592,232	0	C	T	100.0%	1507.4 / NA	407	R57Q (CGA→CAA)	nfrB	NfrB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (227/180); total (227/180)

Only 100 of 441 total aligned reads displayed.

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

atatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgc                                                                                         >  1:8766900/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  1:2884732/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  1:8555447/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        <  1:1516406/93‑1 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  2:7834553/1‑93 (MQ=255)

    tGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGt                                                                                     <  2:1444488/93‑1 (MQ=255)

     gCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTa                                                                                    <  2:1792272/93‑1 (MQ=255)

       cGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgc                                                                                  <  2:6116687/93‑1 (MQ=255)

       cGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgc                                                                                  <  2:2797970/93‑1 (MQ=255)

       cGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgc                                                                                  <  1:7035152/93‑1 (MQ=255)

        gATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcg                                                                                 >  2:6448106/1‑93 (MQ=255)

            gcGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGa                                                                             <  1:1879945/92‑1 (MQ=255)

            aCGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGa                                                                             <  2:9492982/93‑1 (MQ=255)

              gCCCGCTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGCTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATa                                                                           >  1:10031744/1‑93 (MQ=255)

                ccGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATaaa                                                                         <  1:2165047/93‑1 (MQ=255)

                 cGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATaacc                                                                        <  2:7028689/93‑3 (MQ=255)

                 cGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCCGCGATAAac                                                                        >  1:1061156/1‑93 (MQ=255)

                 cGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATATGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAac                                                                        >  2:7490475/1‑93 (MQ=255)

                  gTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAaca                                                                       >  2:2312721/1‑93 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      <  1:1739523/93‑1 (MQ=255)

                   tttCATCCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      <  1:8806952/93‑1 (MQ=255)

                    ttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACt                                                                     <  1:8002240/93‑1 (MQ=255)

                     tCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTc                                                                    >  1:9099227/1‑93 (MQ=255)

                       aTTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCaa                                                                  >  2:6535618/1‑93 (MQ=255)

                       aTTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCaa                                                                  >  2:398267/1‑93 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 >  2:2030727/1‑93 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 >  2:4064811/1‑93 (MQ=255)

                         tCCACGCCGGAACCATAATCGCTAACGGTGTTTAATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACt                                                                <  1:6090467/93‑1 (MQ=255)

                          ccACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACtt                                                               <  2:3460517/93‑1 (MQ=255)

                          ccACCCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACtt                                                               <  1:5529627/93‑1 (MQ=255)

                              gCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGt                                                           <  2:4158632/93‑1 (MQ=255)

                               ccGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGtt                                                          >  2:7711101/1‑93 (MQ=255)

                                  gAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTaa                                                       >  2:6038311/1‑93 (MQ=255)

                                   aaCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAAt                                                      <  2:4409677/93‑1 (MQ=255)

                                    aCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATg                                                     <  1:4246355/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    >  2:2919638/1‑93 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    <  2:832128/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    <  2:4532662/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    <  2:4922135/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    <  2:5946768/93‑1 (MQ=255)

                                       aTAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcgg                                                  <  1:5248144/93‑1 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 >  2:3318515/1‑93 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 >  1:5669430/1‑93 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 <  2:8626597/93‑1 (MQ=255)

                                         aaTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggcg                                                >  2:9811996/1‑93 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGt                                               >  2:6245687/1‑93 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGt                                               <  1:3560622/93‑1 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGt                                               <  1:4178869/93‑1 (MQ=255)

                                           tCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTa                                              >  2:6849671/1‑93 (MQ=255)

                                             gatAACGGTTTTTCATCTGGTTTATACAGTACGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTGcc                                            <  2:8951104/91‑1 (MQ=255)

                                              cTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAccc                                           <  1:2242986/93‑1 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          >  1:6412774/1‑93 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          >  1:2085955/1‑93 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        <  2:3109049/93‑1 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        <  1:9434431/93‑1 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        >  2:5549771/1‑93 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        <  2:243231/93‑1 (MQ=255)

                                                  cGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTa                                       <  2:8201011/93‑1 (MQ=255)

                                                   ggTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAg                                      <  2:8131376/93‑1 (MQ=255)

                                                   ggTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAg                                      >  1:2787461/1‑93 (MQ=255)

                                                   ggTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAg                                      <  1:3940674/93‑1 (MQ=255)

                                                   ggTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAg                                      >  1:9720850/1‑93 (MQ=255)

                                                    gTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTCCCCAGTAga                                     >  1:3420671/1‑93 (MQ=255)

                                                    gTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAga                                     <  2:1643120/93‑1 (MQ=255)

                                                     tttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgac                                    >  1:5954323/1‑93 (MQ=255)

                                                     tttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgac                                    >  1:785959/1‑93 (MQ=255)

                                                      ttttCATCTGGTTTATACAGCTCGCGGTAACTCATTTGCGGGCAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTacacc                                   >  2:3190221/1‑92 (MQ=255)

                                                        ttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgacgac                                 <  2:1169413/93‑1 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACACAGTAGACGACATc                              >  1:6695890/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCa                             >  1:2446852/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGAGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCa                             >  1:7630232/1‑93 (MQ=255)

                                                             cTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCaa                            >  1:1290688/1‑93 (MQ=255)

                                                              tGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAAt                           >  1:9903719/1‑93 (MQ=255)

                                                               ggTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATa                          >  1:8390830/1‑93 (MQ=255)

                                                                gTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaa                         <  1:1784880/93‑1 (MQ=255)

                                                                 tttATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaa                        <  1:5799418/93‑1 (MQ=255)

                                                                 tttATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaa                        >  1:7728261/1‑93 (MQ=255)

                                                                 tttATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaa                        >  1:1921378/1‑93 (MQ=255)

                                                                   tataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaa                      >  1:1400233/1‑93 (MQ=255)

                                                                   tataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaa                      >  2:5097997/1‑93 (MQ=255)

                                                                   tataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaa                      >  1:3296656/1‑93 (MQ=255)

                                                                    ataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaa                     >  2:1260276/1‑93 (MQ=255)

                                                                     taCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaaa                    >  2:8771676/1‑93 (MQ=255)

                                                                     taCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaaa                    >  1:4627302/1‑93 (MQ=255)

                                                                         gTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGt                >  1:6258578/1‑93 (MQ=255)

                                                                          ttCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTc               >  2:3592071/1‑93 (MQ=255)

                                                                           tCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTcc              <  1:4732703/93‑1 (MQ=255)

                                                                           tCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTcc              <  2:2988290/93‑1 (MQ=255)

                                                                           tCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTcc              <  1:728454/93‑1 (MQ=255)

                                                                              cgGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGc           >  2:9184757/1‑93 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          >  2:6286869/1‑93 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          >  1:4539851/1‑93 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          >  1:4990820/1‑93 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          >  1:6793905/1‑93 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          >  1:9546062/1‑93 (MQ=255)

                                                                                gTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGccc         <  1:9266520/93‑1 (MQ=255)

                                                                                   aCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCt      >  1:1202868/1‑93 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    <  2:5424176/93‑1 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    >  2:2176676/1‑93 (MQ=255)

                                                                                      cATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgat   <  2:4728099/93‑1 (MQ=255)

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`