BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	595,469	A→G	Q216R (CAG→CGG)	ylcB →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	595,469	0	A	G	100.0%	1008.7 / NA	314	Q216R (CAG→CGG)	ylcB	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (155/159); total (155/159)

Only 100 of 326 total aligned reads displayed.

CCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595379‑595558

  gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       <  1:7655531/93‑1 (MQ=255)

  gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       >  1:1341814/1‑93 (MQ=255)

  caagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       <  2:9468380/92‑1 (MQ=255)

   aagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTc                                                                                      <  2:1631321/93‑1 (MQ=255)

   aagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTc                                                                                      >  2:2148958/1‑93 (MQ=255)

   aagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTc                                                                                      <  2:5472381/93‑1 (MQ=255)

     gaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTcgc                                                                                    >  2:4590359/1‑93 (MQ=255)

      aaaCGCTGCGTAATTATCAGCAGTCATCTGCGTTTGGCGACAATCAACTGTTGACTGGTAGCAGCAATGTTCTGGCGCTGGAACGGTCTcgcg                                                                                   <  2:5225232/93‑1 (MQ=255)

      aaaCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTcgcg                                                                                   >  1:5524529/1‑93 (MQ=255)

          gCTGAGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAAATGTAGACAGGTAGCAGTAATGTTCTGGCGCTAGAACGGGCTCAAGGGGt                                                                               <  2:8975528/93‑1 (MQ=255)

            tGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGa                                                                             >  1:4352841/1‑93 (MQ=255)

             gCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGAt                                                                            <  1:8680897/93‑1 (MQ=255)

              cGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATa                                                                           <  2:4214568/93‑1 (MQ=255)

              cGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATa                                                                           <  1:4707845/93‑1 (MQ=255)

                tAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGa                                                                         >  2:6872874/1‑93 (MQ=255)

                 aaTTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGaa                                                                        <  2:483250/93‑1 (MQ=255)

                  aTTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTTTGGCGCTGGAACGGGCTCGCGGGGTGATAGaaa                                                                       >  1:9676999/1‑93 (MQ=255)

                   ttATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAg                                                                      >  1:3624081/1‑93 (MQ=255)

                    tATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGt                                                                     <  1:239171/93‑1 (MQ=255)

                      tCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAc                                                                   <  1:8075450/93‑1 (MQ=255)

                       cagcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAcc                                                                  <  2:7503716/93‑1 (MQ=255)

                        agcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGGGATAGAAAGTAccc                                                                 >  1:1206970/1‑93 (MQ=255)

                          cagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGc                                                               <  2:5924265/93‑1 (MQ=255)

                          cagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGc                                                               >  1:10013488/1‑93 (MQ=255)

                          cagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGc                                                               >  1:331121/1‑93 (MQ=255)

                            gTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAg                                                             <  2:1526024/93‑1 (MQ=255)

                            gTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAg                                                             >  2:808622/1‑93 (MQ=255)

                             tCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGc                                                            <  1:3059256/93‑1 (MQ=255)

                                  tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       <  1:7847923/93‑1 (MQ=255)

                                  tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       <  2:8202930/93‑1 (MQ=255)

                                  tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       >  1:8381428/1‑93 (MQ=255)

                                  tGCGTTTGGCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       <  1:1751/93‑1 (MQ=255)

                                   gCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATc                                                      <  1:661621/93‑1 (MQ=255)

                                    cGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCg                                                     >  2:8480082/1‑93 (MQ=255)

                                      tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAGCCGCAGCGACATCGCt                                                   >  1:4082055/1‑93 (MQ=255)

                                      tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCt                                                   <  2:3211605/93‑1 (MQ=255)

                                      tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGGGATAGAAAGTACCCGCAGCGACATCGCt                                                   >  2:8038841/1‑93 (MQ=255)

                                       ttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTa                                                  >  2:10042287/1‑93 (MQ=255)

                                        tGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGAGATAGAAAGTACCCGCAGCGACATCGCTaa                                                 >  1:6054960/1‑93 (MQ=255)

                                         gTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTaaa                                                <  1:9224273/93‑1 (MQ=255)

                                         gTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTaaa                                                <  1:25193/93‑1 (MQ=255)

                                           cGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACg                                              >  1:684782/1‑93 (MQ=255)

                                             aaaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTc                                            <  1:7523385/93‑1 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTcg                                           >  1:2505001/1‑92 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           <  2:251918/93‑1 (MQ=255)

                                                aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         >  1:3380309/1‑93 (MQ=255)

                                                aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         >  1:481945/1‑93 (MQ=255)

                                                aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         >  2:4428461/1‑93 (MQ=255)

                                                 acaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggg                                        >  1:8851713/1‑93 (MQ=255)

                                                   aacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggggg                                      >  1:5662366/1‑93 (MQ=255)

                                                    acTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGa                                     >  1:2693212/1‑93 (MQ=255)

                                                      tGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAAc                                   <  2:2569587/93‑1 (MQ=255)

                                                      tGTTGACAGGTAGCAGTAATGATCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAAc                                   >  2:9315449/1‑93 (MQ=255)

                                                       gTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACt                                  <  1:5406614/93‑1 (MQ=255)

                                                       gTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACt                                  <  1:8234288/93‑1 (MQ=255)

                                                        ttGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGCACTg                                 >  2:2972412/1‑93 (MQ=255)

                                                        ttGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTg                                 <  1:7220491/93‑1 (MQ=255)

                                                         tGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTgg                                >  1:5262872/1‑93 (MQ=255)

                                                          gACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgc                               <  2:3343009/93‑1 (MQ=255)

                                                          gACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgc                               >  2:6997619/1‑93 (MQ=255)

                                                            cAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgcgc                             <  1:6405416/93‑1 (MQ=255)

                                                             aGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCa                            <  1:2743017/93‑1 (MQ=255)

                                                              ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  2:6110184/93‑1 (MQ=255)

                                                                tAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGc                         >  2:8767224/1‑93 (MQ=255)

                                                                gaGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGc                         <  2:1962476/92‑1 (MQ=255)

                                                                 aGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCg                        >  2:1149576/1‑93 (MQ=255)

                                                                  gCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGa                       <  1:3972653/93‑1 (MQ=255)

                                                                  gCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGa                       >  2:3663360/1‑93 (MQ=255)

                                                                    aGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaat                     <  1:1959485/93‑1 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGGACTGGCGCAGGCGaata                    >  1:4470028/1‑93 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaata                    <  2:4791392/93‑1 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaata                    <  1:9040542/93‑1 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   <  1:972916/93‑1 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   >  2:643854/1‑93 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   <  2:176926/93‑1 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGGTAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  >  1:8573152/1‑93 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  <  2:9545716/93‑1 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  <  2:9112038/93‑1 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  <  2:7091066/93‑1 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  <  2:7210778/93‑1 (MQ=255)

                                                                         tGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGc                >  2:1068894/1‑93 (MQ=255)

                                                                         tGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGc                >  1:6194422/1‑93 (MQ=255)

                                                                            tCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAtt             <  1:3814586/93‑1 (MQ=255)

                                                                             cTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTg            <  1:1612459/93‑1 (MQ=255)

                                                                             cTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGCCAGGGGGAACTGGCGCAGGCGAATAATGCATTg            >  1:2990059/1‑93 (MQ=255)

                                                                             cTGGCGCTGGAACGGGCTCGCGGCGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTg            <  2:5751920/93‑1 (MQ=255)

                                                                              tGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGc           >  2:230836/1‑93 (MQ=255)

                                                                              tGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGc           <  2:6700745/93‑1 (MQ=255)

                                                                               ggCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCa          <  1:7396703/93‑1 (MQ=255)

                                                                                 cgcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAAc        <  1:1066789/93‑1 (MQ=255)

                                                                                  gcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACt       >  1:6486304/1‑93 (MQ=255)

                                                                                  gcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACt       >  1:4996732/1‑93 (MQ=255)

                                                                                   cTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTg      <  1:9427831/93‑1 (MQ=255)

                                                                                    tGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTGAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGt     >  2:3939276/1‑93 (MQ=255)

                                                                                    tGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGAGCAGGCGCATAATGCATTGCAACTGt     >  1:982319/1‑93 (MQ=255)

                                                                                     ggAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGtt    <  2:9598044/93‑1 (MQ=255)

                                                                                      gAACGGGCTCGCGGGTTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTg   <  2:7683980/93‑1 (MQ=255)

                                                                                       aaCGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGc  <  2:3499715/93‑1 (MQ=255)

                                                                                       aaCGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGc  <  1:4851631/93‑1 (MQ=255)

                                                                                       aaCGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGc  <  1:353760/93‑1 (MQ=255)

CCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595379‑595558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`