BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,606,400	G→A	Q62Q (CAG→CAA)	yjjG →	putative phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,606,400	0	G	A	99.8%	1440.0 / NA	400	Q62Q (CAG→CAA)	yjjG	putative phosphatase
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (212/187); minor base C (0/1); total (212/188)
Fisher's exact test for biased strand distribution p-value = 4.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 409 total aligned reads displayed.

ACCTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAGCTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCGGA  >  NC_000913/4606311‑4606489

cccTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACtt                                                                                        <  1:8494165/92‑1 (MQ=255)

     tACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCa                                                                                   <  2:1570826/93‑1 (MQ=255)

     tACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCa                                                                                   <  1:5296652/93‑1 (MQ=255)

       cagCTAAAGATTTACAGAAAAATCAGGCCGTTACCAAGCCAATGTGGGTGGATTATCAAAACGACGCGATCACTTCATTACAACTTCAGCaag                                                                                 <  1:8973741/91‑3 (MQ=255)

        cGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACgg                                                                                <  2:3416230/93‑1 (MQ=255)

         gcggAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACggg                                                                               <  2:4031737/90‑1 (MQ=255)

         gCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACggg                                                                               <  1:181356/93‑1 (MQ=255)

          cTGAATATTTTAAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGc                                                                              <  1:130709/93‑1 (MQ=255)

           tGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCg                                                                             >  1:6029556/1‑93 (MQ=255)

           tGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCg                                                                             >  1:4150119/1‑93 (MQ=255)

            gAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCgg                                                                            >  2:1977145/1‑93 (MQ=255)

            gAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCgg                                                                            >  1:3771094/1‑93 (MQ=255)

             aaGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGt                                                                           >  2:3243772/1‑93 (MQ=255)

             aaGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGt                                                                           >  2:5693469/1‑93 (MQ=255)

              aGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGtt                                                                          >  1:390810/1‑93 (MQ=255)

               gATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGttt                                                                         >  1:2579305/1‑93 (MQ=255)

                 ttttCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTga                                                                       <  2:7480333/93‑1 (MQ=255)

                   ttCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTgaga                                                                     <  2:9841845/93‑1 (MQ=255)

                   ttCAGGACTATCAGGCCGTAAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTgaga                                                                     <  2:6554325/93‑1 (MQ=255)

                   tccAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTgaga                                                                     <  2:2470595/91‑1 (MQ=255)

                     cAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGc                                                                   <  1:6943396/93‑1 (MQ=255)

                      aGGACTATGAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCt                                                                  <  1:4611994/93‑1 (MQ=255)

                      aGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCt                                                                  >  1:1583960/1‑93 (MQ=255)

                       ggACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTg                                                                 >  1:5539016/1‑93 (MQ=255)

                       ggACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTg                                                                 <  1:2007142/93‑1 (MQ=255)

                       ggACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTg                                                                 <  2:6640544/93‑1 (MQ=255)

                       ggACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTg                                                                 >  2:4466682/1‑93 (MQ=255)

                        gACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTTAGCACGGGCGGTTTGAGAGCTgg                                                                >  2:6860706/1‑93 (MQ=255)

                           tATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGcc                                                             >  2:8411359/1‑93 (MQ=255)

                            aTCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCg                                                            >  2:8281071/1‑93 (MQ=255)

                            aTCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCg                                                            >  2:1131769/1‑93 (MQ=255)

                              cAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGaa                                                          >  1:240598/1‑93 (MQ=255)

                              cAGGCCCTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGaa                                                          <  2:9137747/93‑1 (MQ=255)

                              aaGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGaa                                                          <  1:7429500/92‑1 (MQ=255)

                               aGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAAc                                                         >  2:4369228/1‑93 (MQ=255)

                                  ccGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGc                                                      <  2:8582771/93‑1 (MQ=255)

                                  ccGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGc                                                      <  1:3012901/93‑1 (MQ=255)

                                      tAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGaa                                                  <  1:8012611/93‑1 (MQ=255)

                                      tAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGCTTGAGAGCTGGGCCGAACGGCTGaa                                                  >  2:2689831/1‑93 (MQ=255)

                                          aaGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTc                                              >  2:770830/1‑93 (MQ=255)

                                             gcACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAg                                           <  1:7699065/92‑1 (MQ=255)

                                             ccACTGTGGGTGGATTATCAAAACGGCGCTATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAg                                           >  1:8070579/1‑93 (MQ=255)

                                             ccACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAg                                           <  2:3800448/93‑1 (MQ=255)

                                              cACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGc                                          >  1:955032/1‑93 (MQ=255)

                                               aCTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGcc                                         <  2:4929596/93‑1 (MQ=255)

                                                cTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCa                                        >  2:7300442/1‑93 (MQ=255)

                                                   tgggtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGt                                     <  2:4828434/93‑1 (MQ=255)

                                                    gggtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTa                                    >  1:4446439/1‑93 (MQ=255)

                                                    gggtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTa                                    <  1:2227231/93‑1 (MQ=255)

                                                     ggtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACTTCGAGCCAGGTaa                                   <  1:6719013/93‑1 (MQ=255)

                                                      gtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTaaa                                  >  2:3030355/1‑93 (MQ=255)

                                                      gtggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGCGCCGAACGGCTGAACGTCGAGCCAGGTaaa                                  >  1:7362107/1‑93 (MQ=255)

                                                       tggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAAc                                 <  1:9976395/93‑1 (MQ=255)

                                                       tggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAAc                                 <  2:8811170/93‑1 (MQ=255)

                                                       tggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAAc                                 >  1:6387879/1‑93 (MQ=255)

                                                        ggATTATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGGAAACt                                >  1:2821252/1‑93 (MQ=255)

                                                           ttATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCaa                             >  1:9204098/1‑93 (MQ=255)

                                                           ttATCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCaa                             <  1:3134157/93‑1 (MQ=255)

                                                             aTCAAAACGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACg                           <  2:3580959/93‑1 (MQ=255)

                                                                aaaaCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGACCGTCGAGCCACGTAAACTCAACGAAg                        >  1:4268192/1‑93 (MQ=255)

                                                                aaaaCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAg                        <  1:967886/93‑1 (MQ=255)

                                                                 aaaCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACTTCGAGCCAGGTAAACTCAACGAAGc                       >  2:127491/1‑93 (MQ=255)

                                                                 aaaCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGc                       <  2:1022499/93‑1 (MQ=255)

                                                                   aCGGCGCGATCACTTCATTACACCTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAACCTCAACGAAGCCt                     <  2:6378322/93‑1 (MQ=255)

                                                                   aCGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCt                     >  1:3997152/1‑93 (MQ=255)

                                                                    cGGCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCtt                    <  1:3620564/93‑1 (MQ=255)

                                                                     ggCGCGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCttt                   <  2:234924/93‑1 (MQ=255)

                                                                      gcgcGATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTtta                  <  2:9458378/93‑1 (MQ=255)

                                                                       cgcgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttat                 <  2:6177937/93‑1 (MQ=255)

                                                                        gcgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttatt                <  1:6152171/93‑1 (MQ=255)

                                                                        gcgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttatt                >  1:5181696/1‑93 (MQ=255)

                                                                         cgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttatta               <  1:5972896/93‑1 (MQ=255)

                                                                         cgATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTttatta               >  2:3304595/1‑93 (MQ=255)

                                                                          gATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              <  2:5332062/93‑1 (MQ=255)

                                                                          gATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              <  2:6777194/93‑1 (MQ=255)

                                                                          gATCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTaa              <  1:5386429/93‑1 (MQ=255)

                                                                           aTCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAAt             >  1:7824903/1‑93 (MQ=255)

                                                                           aTCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAAt             >  1:1291258/1‑93 (MQ=255)

                                                                            tCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGTCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATg            <  1:1113335/93‑1 (MQ=255)

                                                                            tCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATg            >  2:3958497/1‑93 (MQ=255)

                                                                            tCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATg            >  2:1833921/1‑93 (MQ=255)

                                                                            tCACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTCTATTAATg            >  2:8985563/1‑93 (MQ=255)

                                                                             cACTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGc           <  1:10030562/93‑1 (MQ=255)

                                                                               cTTCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGa         >  2:5116719/1‑93 (MQ=255)

                                                                                ttCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGAt        >  1:4884569/1‑93 (MQ=255)

                                                                                ttCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGAt        <  1:8380642/93‑1 (MQ=255)

                                                                                ctCATTACAACTTCAGCACCGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGAt        <  1:9357039/92‑1 (MQ=255)

                                                                                 tCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATg       >  2:7029824/1‑93 (MQ=255)

                                                                                 tCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATg       >  2:6093350/1‑93 (MQ=255)

                                                                                 tCATTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATg       >  1:7503661/1‑93 (MQ=255)

                                                                                   aTTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGc     <  2:7988285/93‑1 (MQ=255)

                                                                                   aTTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGc     >  1:6302344/1‑93 (MQ=255)

                                                                                   aTTACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGc     <  1:8751489/93‑1 (MQ=255)

                                                                                    ttACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCg    >  2:6254970/1‑93 (MQ=255)

                                                                                    ttACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCg    >  1:3440511/1‑93 (MQ=255)

                                                                                    ttACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCg    <  1:8192466/93‑1 (MQ=255)

                                                                                    ttACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCg    >  1:887750/1‑93 (MQ=255)

                                                                                     tACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCgg   >  1:2704925/1‑93 (MQ=255)

                                                                                     tACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCgg   >  1:9836101/1‑93 (MQ=255)

                                                                                     tACAACTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCgg   <  2:9567470/93‑1 (MQ=255)

ACCTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAGCTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCGGA  >  NC_000913/4606311‑4606489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`