BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	654,812	G→A	A127V (GCC→GTC)	dcuC ←	DcuC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	654,812	0	G	A	100.0%	1155.9 / NA	316	A127V (GCC→GTC)	dcuC	DcuC
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (163/153); total (163/153)

Only 100 of 333 total aligned reads displayed.

ATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGGCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCG  >  NC_000913/654722‑654901

aTACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACg                                                                                         >  2:4011246/1‑93 (MQ=255)

 tACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGa                                                                                        >  2:6628580/1‑93 (MQ=255)

  aCCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAgacgac                                                                                       <  2:8158813/93‑1 (MQ=255)

   ccAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACa                                                                                      >  2:5125856/1‑93 (MQ=255)

    cAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACaa                                                                                     >  1:1076984/1‑93 (MQ=255)

    cAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACaa                                                                                     >  1:6331168/1‑93 (MQ=255)

    cAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACaa                                                                                     <  1:2413795/93‑1 (MQ=255)

        gTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATa                                                                                 >  1:2140416/1‑93 (MQ=255)

         tttACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAg                                                                                >  2:9766268/1‑93 (MQ=255)

         tttACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAg                                                                                >  2:9031334/1‑93 (MQ=255)

         tttACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAg                                                                                >  2:1918311/1‑93 (MQ=255)

           tACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggc                                                                              >  2:3476054/1‑93 (MQ=255)

            aCCATCACCGGAAATAGGGGTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggcg                                                                             >  2:8685041/1‑93 (MQ=255)

              cATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggcggc                                                                           <  1:4500522/93‑1 (MQ=255)

              cATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggcggc                                                                           <  2:5774842/93‑1 (MQ=255)

               aTCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCa                                                                          >  2:3211663/1‑93 (MQ=255)

                tCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCaa                                                                         >  1:2918799/1‑93 (MQ=255)

                tCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCaa                                                                         >  1:636764/1‑93 (MQ=255)

                tCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGCTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCaa                                                                         >  2:7150345/1‑93 (MQ=255)

                   ccGGGAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAatca                                                                      <  1:3505743/93‑1 (MQ=255)

                   ccGGAAATACGGTTGCCATCAGCAAACCACCCAGACCGGTTGCGGAAGAGACGCCTACAGACATCAGACAGACGACAAAATAGCCGGCAatca                                                                      <  2:4977056/93‑1 (MQ=255)

                     ggAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAatcatc                                                                    <  1:7917645/93‑1 (MQ=255)

                      gAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAAtcatca                                                                   >  1:3230572/1‑93 (MQ=255)

                        aaTAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagc                                                                 >  1:7084491/1‑93 (MQ=255)

                        aaTAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagc                                                                 >  1:1293369/1‑93 (MQ=255)

                         aTAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagca                                                                >  2:2644473/1‑93 (MQ=255)

                          tAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagcag                                                               <  2:3291805/93‑1 (MQ=255)

                          tAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagcag                                                               >  2:4567665/1‑93 (MQ=255)

                             ggTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTa                                                            <  1:1864581/93‑1 (MQ=255)

                              gTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTaa                                                           <  1:1983644/93‑1 (MQ=255)

                              gTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTaa                                                           >  2:416057/1‑93 (MQ=255)

                               ttGTCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAg                                                          <  2:1851124/93‑1 (MQ=255)

                               ttGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAg                                                          >  2:6063258/1‑93 (MQ=255)

                                tGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAgg                                                         >  2:9339925/1‑93 (MQ=255)

                                tGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAgg                                                         >  1:9261148/1‑93 (MQ=255)

                                 gCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAggg                                                        >  1:1435359/1‑93 (MQ=255)

                                 gCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAggg                                                        >  1:8881085/1‑93 (MQ=255)

                                   cATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGa                                                      <  1:3656852/93‑1 (MQ=255)

                                    aTCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAg                                                     >  1:6698299/1‑93 (MQ=255)

                                     tCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGt                                                    >  1:2673048/1‑93 (MQ=255)

                                     tCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGAAAgggtggt                                                    >  1:2948485/1‑89 (MQ=255)

                                       aGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTa                                                  <  1:2337382/93‑1 (MQ=255)

                                        gCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGTGAGTTaa                                                 <  1:4169249/93‑1 (MQ=255)

                                          aaaaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAata                                               <  1:2182628/93‑1 (MQ=255)

                                          aaaaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAata                                               >  1:6018266/1‑93 (MQ=255)

                                           aaaCACCCAGACCGGTTGCGGAAGCGACGGCCAGAGGCATCAGACAGACGACAAAATAGGAGGCAATCATCAGCAGGCAAGGGGAGTTTatat                                              >  2:9174820/1‑93 (MQ=255)

                                           aaaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAatat                                              >  1:4889811/1‑93 (MQ=255)

                                            aaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAAtata                                             <  2:363500/93‑1 (MQ=255)

                                            aaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAAtata                                             <  2:5171288/93‑1 (MQ=255)

                                             acacCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATAc                                            >  2:8714138/1‑93 (MQ=255)

                                             acacCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATAc                                            <  1:7608158/93‑1 (MQ=255)

                                              cacCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACt                                           >  2:9679357/1‑93 (MQ=255)

                                               acCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTg                                          <  2:5646560/93‑1 (MQ=255)

                                                cccAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGc                                         <  1:5654460/93‑1 (MQ=255)

                                                    gACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATg                                     >  1:7809410/1‑93 (MQ=255)

                                                     aCCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATgg                                    <  2:6537234/93‑1 (MQ=255)

                                                      ccGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGt                                   <  2:1511593/93‑1 (MQ=255)

                                                      ccGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGt                                   <  2:126838/93‑1 (MQ=255)

                                                        ggTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGttt                                 <  2:4726038/93‑1 (MQ=255)

                                                         gTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGtttt                                >  1:9446754/1‑93 (MQ=255)

                                                          ttGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTg                               <  1:285464/93‑1 (MQ=255)

                                                           tGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGa                              <  1:1721489/93‑1 (MQ=255)

                                                           tGCGAAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGa                              <  2:6265906/93‑1 (MQ=255)

                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  2:5490412/1‑93 (MQ=255)

                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  1:6443697/1‑93 (MQ=255)

                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  2:6596853/1‑93 (MQ=255)

                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  1:7242112/1‑93 (MQ=255)

                                                                aaGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCa                         <  2:2469433/93‑1 (MQ=255)

                                                                 agagACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAg                        >  1:10021078/1‑93 (MQ=255)

                                                                   agaCGGCCAGAGACATCAGACAGTCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCt                      <  2:6898780/93‑1 (MQ=255)

                                                                    gaCGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCtt                     <  1:5216291/93‑1 (MQ=255)

                                                                    gaCGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCtt                     >  2:798333/1‑93 (MQ=255)

                                                                     aCGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTg                    >  2:8429519/1‑93 (MQ=255)

                                                                        gCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGacc                 >  1:6885301/1‑93 (MQ=255)

                                                                        gCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGacc                 <  1:8144851/93‑1 (MQ=255)

                                                                        gCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGacc                 >  1:9005726/1‑93 (MQ=255)

                                                                           tttgaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAAtata                                             <  1:856630/59‑1 (MQ=255)

                                                                           agagACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGaccacc              >  2:8452093/1‑93 (MQ=255)

                                                                           agagACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGaccacc              >  1:1639228/1‑93 (MQ=255)

                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             >  2:956664/1‑93 (MQ=255)

                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             <  2:2177850/93‑1 (MQ=255)

                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             >  2:2072359/1‑93 (MQ=255)

                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             <  1:9590885/93‑1 (MQ=255)

                                                                             agaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCat            <  2:3725920/93‑1 (MQ=255)

                                                                               aCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCatat          >  1:8423790/1‑93 (MQ=255)

                                                                                cATCAGACAGACGACAAAATAGCCGGCAATCATCAGCAGGTAAGGGGCGTTAATATACTGCAATGGCTTTGACGCCAGCTTCACCACCATATc         >  1:6732353/1‑93 (MQ=255)

                                                                                 aTCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCa        >  2:7553006/1‑93 (MQ=255)

                                                                                 aTCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCa        <  2:1340338/93‑1 (MQ=255)

                                                                                 aTCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGAAATGGTTTTGACGCCAGCTTGACCACCATATCa        >  1:9681692/1‑93 (MQ=255)

                                                                                  tCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAt       >  2:7900326/1‑93 (MQ=255)

                                                                                  tCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAt       <  1:4598399/93‑1 (MQ=255)

                                                                                   cagacagaCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAtt      <  2:7426889/93‑1 (MQ=255)

                                                                                   cAGACATACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAtt      <  1:4240059/93‑1 (MQ=255)

                                                                                    agacagacGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTc     <  2:1099334/93‑1 (MQ=255)

                                                                                    agacagacGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTc     >  2:2765376/1‑93 (MQ=255)

                                                                                     gACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCCGCTTGACCACCATATCATTcg    >  1:5142589/1‑93 (MQ=255)

                                                                                      aCAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgc   <  2:3816254/93‑1 (MQ=255)

                                                                                       cAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgcg  <  1:3912736/93‑1 (MQ=255)

                                                                                       cAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgcg  <  2:7242111/93‑1 (MQ=255)

                                                                                       cAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgcg  <  2:6443696/93‑1 (MQ=255)

ATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGGCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCG  >  NC_000913/654722‑654901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`