BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	780,533	A→G	intergenic (+88/‑59)	lysY → / → lysZ	tRNA‑Lys/tRNA‑Lys

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	780,533	0	A	G	100.0%	836.0 / NA	263	intergenic (+88/‑59)	lysY/lysZ	tRNA‑Lys/tRNA‑Lys
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (147/116); total (147/116)

Only 100 of 276 total aligned reads displayed.

CCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGA  >  NC_000913/780443‑780622

ccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGcgcg                                                                                         >  1:4715549/1‑93 (MQ=255)

ccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGcgcg                                                                                         >  1:7243177/1‑93 (MQ=255)

 caGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGa                                                                                        >  1:6941265/1‑93 (MQ=255)

  aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGAc                                                                                       <  1:4563982/93‑1 (MQ=255)

  aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGAc                                                                                       >  1:8291558/1‑93 (MQ=255)

  aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGAc                                                                                       >  2:2498113/1‑93 (MQ=255)

   gTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGAcc                                                                                      >  2:1437152/1‑93 (MQ=255)

    ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGAccc                                                                                     >  2:8651481/1‑93 (MQ=255)

       tAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACccacc                                                                                  <  1:4817488/93‑1 (MQ=255)

       tAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACccacc                                                                                  <  1:5071101/93‑1 (MQ=255)

        aaCATCAACCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACccacca                                                                                 >  2:4764896/1‑93 (MQ=255)

          cATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAAt                                                                               <  1:9974073/93‑1 (MQ=255)

          cATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAAt                                                                               <  2:911710/93‑1 (MQ=255)

           aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATc                                                                              <  2:3660054/93‑1 (MQ=255)

           aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATc                                                                              >  2:3154878/1‑93 (MQ=255)

            tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCt                                                                             <  2:7413621/93‑1 (MQ=255)

             cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCtt                                                                            <  1:7028734/93‑1 (MQ=255)

              aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTa                                                                           >  2:8507737/1‑93 (MQ=255)

               aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTaa                                                                          >  2:9050350/1‑93 (MQ=255)

               aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCATAGGGCGAGCGAAGCGCGTCATCCTGCGCGACCCACCAATCTTaa                                                                          >  1:1624454/1‑93 (MQ=255)

                aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTaaa                                                                         <  1:8323645/93‑1 (MQ=255)

                 cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAg                                                                        >  1:8644117/1‑93 (MQ=255)

                  tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGa                                                                       <  1:1184972/93‑1 (MQ=255)

                  ccAGATGTGAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGa                                                                       <  2:6326492/92‑1 (MQ=255)

                    aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGCAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGAtt                                                                     >  2:7988386/1‑93 (MQ=255)

                      aTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGGGACCCACCGATCTTAAAGATTgg                                                                   >  1:6035891/1‑93 (MQ=255)

                       tGTTACGCGTGAGGGATACCGTTGCGCCAGCACCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGc                                                                  <  2:2014856/93‑1 (MQ=18)

                          tAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGcccc                                                               >  2:5872961/1‑93 (MQ=255)

                            aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGa                                                             >  1:5767323/1‑93 (MQ=255)

                            aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGa                                                             <  2:9229685/93‑1 (MQ=255)

                            aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGa                                                             <  2:399843/93‑1 (MQ=255)

                             gCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAg                                                            >  1:1913027/1‑93 (MQ=255)

                             gCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAg                                                            <  1:5270350/93‑1 (MQ=255)

                                tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTaa                                                         >  2:5123875/1‑93 (MQ=255)

                                tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTaa                                                         >  1:9775920/1‑93 (MQ=255)

                                tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTaa                                                         >  1:8952711/1‑93 (MQ=255)

                                     gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTACAAATc                                                    >  1:9275525/1‑93 (MQ=255)

                                     gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATc                                                    <  1:3010116/93‑1 (MQ=255)

                                       tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCtt                                                  >  2:9271484/1‑93 (MQ=255)

                                       tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCtt                                                  >  2:4037695/1‑93 (MQ=255)

                                        aaCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCttt                                                 >  2:8282375/1‑93 (MQ=255)

                                         aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc                                                >  2:5406192/1‑93 (MQ=255)

                                         aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc                                                >  2:8556580/1‑93 (MQ=255)

                                         aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc                                                <  1:1552162/93‑1 (MQ=255)

                                         aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc                                                <  1:6791715/93‑1 (MQ=255)

                                          cGTGGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCa                                               <  2:2847674/93‑1 (MQ=255)

                                            ttGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAgg                                             >  1:4173990/1‑93 (MQ=255)

                                               cgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTaa                                          <  1:5387604/93‑1 (MQ=255)

                                                 ccAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAaca                                        <  1:5498225/93‑1 (MQ=255)

                                                      aaCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGt                                   >  2:5338121/1‑93 (MQ=255)

                                                      aaCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTAAGGTAACACCCGt                                   >  1:1463354/1‑93 (MQ=255)

                                                       aCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTa                                  <  2:2294050/93‑1 (MQ=255)

                                                        cGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt                                 >  1:10038881/1‑93 (MQ=255)

                                                         ggCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATg                                <  2:2180859/93‑1 (MQ=255)

                                                         ggCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATg                                <  1:2661450/93‑1 (MQ=255)

                                                          gCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATgg                               <  1:8866457/93‑1 (MQ=255)

                                                           cccGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                              >  2:8800592/1‑93 (MQ=255)

                                                             cGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                            >  2:6498571/1‑93 (MQ=255)

                                                             cGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                            <  1:1966933/93‑1 (MQ=255)

                                                             cGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                            >  2:6580407/1‑93 (MQ=255)

                                                               tAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGt                          >  1:845817/1‑93 (MQ=255)

                                                                aGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                         <  1:5688301/93‑1 (MQ=255)

                                                                 gggCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                        <  2:4570346/93‑1 (MQ=255)

                                                                  ggCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAg                       >  2:5009148/1‑93 (MQ=255)

                                                                     gagcgaAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                    >  2:696908/1‑93 (MQ=255)

                                                                      agcgaagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                   <  1:385815/93‑1 (MQ=255)

                                                                      agcgaagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                   <  2:6717452/93‑1 (MQ=255)

                                                                       gcgaagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAg                  <  2:3771899/93‑1 (MQ=255)

                                                                        cgaagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                 <  1:9227043/93‑1 (MQ=255)

                                                                        cgaagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                 <  2:9742481/93‑1 (MQ=255)

                                                                        cgaagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                 <  1:5193272/93‑1 (MQ=255)

                                                                        cgaagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                 <  2:8409347/93‑1 (MQ=255)

                                                                          aagcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg               >  2:795769/1‑93 (MQ=255)

                                                                           agcgaGTTGTCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTgg              <  1:3222672/93‑1 (MQ=255)

                                                                           agcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTgg              <  2:8371717/93‑1 (MQ=255)

                                                                            gcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt             >  2:4323174/1‑93 (MQ=255)

                                                                            gcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt             <  2:2607998/93‑1 (MQ=255)

                                                                            gcgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt             <  2:8475458/93‑1 (MQ=255)

                                                                             cgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa            <  2:7349531/93‑1 (MQ=255)

                                                                             cgaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa            <  2:7869426/93‑1 (MQ=255)

                                                                              gaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTag           <  1:2459994/93‑1 (MQ=255)

                                                                              gaGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTag           >  2:4917181/1‑93 (MQ=255)

                                                                               aGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga          <  2:1169219/93‑1 (MQ=255)

                                                                               aGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga          >  2:5671663/1‑93 (MQ=255)

                                                                                 tCATCCTGCGCGACCTACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGc        <  1:3714261/93‑1 (MQ=255)

                                                                                   aTCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg      <  1:7521881/93‑1 (MQ=255)

                                                                                   aTCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg      <  2:1542290/93‑1 (MQ=255)

                                                                                    tCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt     >  1:3422331/1‑93 (MQ=255)

                                                                                    tCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt     >  1:8972857/1‑93 (MQ=255)

                                                                                    tCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt     >  1:3344373/1‑93 (MQ=255)

                                                                                     ccTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt    <  1:1268028/93‑1 (MQ=255)

                                                                                     ccTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt    >  1:9561656/1‑93 (MQ=255)

                                                                                     ccTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt    >  1:6442454/1‑93 (MQ=255)

                                                                                      cTGCGCGACTCCTCAATCTTAAAGATTGGCCTCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTGGTTAGCTCAGTTGGTAGAGCAGTTg   <  2:9522226/93‑1 (MQ=37)

                                                                                      cTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg   >  1:946701/1‑93 (MQ=255)

                                                                                      cTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg   >  1:7642093/1‑93 (MQ=255)

                                                                                      cTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg   <  2:1692181/93‑1 (MQ=255)

                                                                                       tGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa  <  2:8151200/93‑1 (MQ=255)

                                                                                       tGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa  <  2:7738053/93‑1 (MQ=255)

                                                                                       tGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa  <  1:797754/93‑1 (MQ=255)

CCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGA  >  NC_000913/780443‑780622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`