Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 888,315 C→T G243D (GGC→GAC)  b0847 ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913888,3150CT99.6% 888.8 / NA 246G243D (GGC→GAC) b0847putative transport protein
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (134/111);  total (134/112)
Fisher's exact test for biased strand distribution p-value = 4.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 257 total aligned reads displayed.

ACCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGCCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCACC  >  NC_000913/888225‑888404
                                                                                          |                                                                                         
aCCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCg                                                                                         <  2:9376289/93‑1 (MQ=255)
  cAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGt                                                                                       <  2:4737785/93‑1 (MQ=255)
    aCGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGttt                                                                                     >  2:8823997/1‑93 (MQ=255)
     cGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGGTCAATGTAGCAGTCGGTTTg                                                                                    >  1:4791429/1‑93 (MQ=255)
      gCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGt                                                                                   <  2:1476279/93‑1 (MQ=255)
      gCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGt                                                                                   >  1:3086189/1‑93 (MQ=255)
       cTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTc                                                                                  <  1:444589/93‑1 (MQ=255)
        tATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCg                                                                                 <  2:385571/93‑1 (MQ=255)
        tATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCg                                                                                 <  1:1915619/93‑1 (MQ=255)
          tttCATCGCCCATTTGTAGCACGGCATCCCCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGAt                                                                               <  1:6022/93‑1 (MQ=255)
          tttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGAt                                                                               >  1:507365/1‑93 (MQ=255)
           ttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATa                                                                              <  1:9643429/93‑1 (MQ=255)
           ttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATa                                                                              <  2:7429470/93‑1 (MQ=255)
             cATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaa                                                                            <  1:368632/93‑1 (MQ=255)
              aTCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAAt                                                                           <  2:4010125/93‑1 (MQ=255)
               tCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATa                                                                          >  2:5276054/1‑93 (MQ=255)
                cGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATAc                                                                         <  1:6418690/93‑1 (MQ=255)
                cGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATAc                                                                         <  1:7857695/93‑1 (MQ=255)
                 gCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATAcc                                                                        >  2:3955962/1‑93 (MQ=255)
                 gCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATAcc                                                                        <  2:9060702/93‑1 (MQ=255)
                   ccATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCa                                                                      >  1:8186705/1‑93 (MQ=255)
                    cATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAg                                                                     <  2:5209082/93‑1 (MQ=255)
                     aTTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGt                                                                    >  2:443098/1‑93 (MQ=255)
                      tttGTAGCACGGCATCACCGTCTGGTTTTGCCAGAATCCCGTTACGTAGAATACGCTCAATGTACCCGGCAGTTTGTCGATAAATAGCCAgag                                                                   >  2:4377157/1‑91 (MQ=255)
                      tttGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGtt                                                                   >  1:2623235/1‑93 (MQ=255)
                       ttGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTc                                                                  >  1:6966411/1‑93 (MQ=255)
                        tGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCa                                                                 <  1:9337861/93‑1 (MQ=255)
                            gCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCa                                                             <  2:2701988/93‑1 (MQ=255)
                              aCGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGa                                                           >  1:5127577/1‑93 (MQ=255)
                               cGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAt                                                          <  2:4179800/93‑1 (MQ=255)
                                ggCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtt                                                         <  2:8779698/93‑1 (MQ=255)
                                  cATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATGCCCAGTTCACGCAGAtttt                                                       <  2:6339049/93‑1 (MQ=255)
                                  cATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtttt                                                       >  1:6360194/1‑93 (MQ=255)
                                   aTCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAttttt                                                      <  2:4052968/93‑1 (MQ=255)
                                    tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtttttc                                                     >  2:7090164/1‑92 (MQ=255)
                                    tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  1:105274/1‑93 (MQ=255)
                                    tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  1:1487666/1‑93 (MQ=255)
                                    tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  2:6067226/1‑93 (MQ=255)
                                     cACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGc                                                    <  1:6838790/93‑1 (MQ=255)
                                      cccGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGcc                                                   <  1:7896526/92‑1 (MQ=255)
                                       ccGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCg                                                  >  2:625277/1‑93 (MQ=255)
                                        cGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGt                                                 >  1:9788395/1‑93 (MQ=255)
                                         gTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTc                                                <  1:5798264/93‑1 (MQ=255)
                                          tCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCg                                               >  2:3505532/1‑93 (MQ=255)
                                          tCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCg                                               >  2:536287/1‑93 (MQ=255)
                                           cTGGATTTGCCATAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCgg                                              <  2:4204484/93‑1 (MQ=255)
                                            tGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGt                                             >  1:4097385/1‑93 (MQ=255)
                                            tGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGt                                             >  2:8090501/1‑93 (MQ=255)
                                              gATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTcc                                           >  2:4141274/1‑93 (MQ=255)
                                              gATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTcc                                           >  2:8895279/1‑93 (MQ=255)
                                               aTTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCa                                          >  2:6478956/1‑93 (MQ=255)
                                               aTTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCa                                          <  2:2575820/93‑1 (MQ=255)
                                               aTTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCa                                          >  2:5158902/1‑93 (MQ=255)
                                                tttGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAg                                         >  2:7746823/1‑93 (MQ=255)
                                                tttGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAg                                         <  2:2029447/93‑1 (MQ=255)
                                                 ttGCCAGAATCTCGTTACGTCGAATACGTTCAATGTAGGAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAgg                                        <  1:9506102/93‑1 (MQ=255)
                                                  tGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATACATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGc                                       >  1:9021885/1‑93 (MQ=255)
                                                    ccAGAATCCCGTTACGTCGAATACGTTCCATGTAGCAGTCGGTTTGTCGATAAATACACAGTTCACGCAGATTTTTGACGTCGGTCCAGGaca                                     >  2:1702536/1‑93 (MQ=255)
                                                      aGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacc                                   >  2:3298502/1‑93 (MQ=255)
                                                        aaTCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAg                                 >  2:4665684/1‑93 (MQ=255)
                                                        aaTCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCAGTCCAGGCCACCAg                                 >  2:4849290/1‑93 (MQ=255)
                                                          tCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGtt                               >  2:9551576/1‑93 (MQ=255)
                                                           cccGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTc                              <  1:4072465/93‑1 (MQ=255)
                                                            ccGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTACCGTCGGTCCAGGCCACCAGTTcc                             >  1:1741140/1‑93 (MQ=255)
                                                             cGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCTCCAGTTCCg                            <  1:4218118/93‑1 (MQ=255)
                                                             cGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCg                            >  1:2271890/1‑93 (MQ=255)
                                                              gTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCgg                           >  1:3850469/1‑93 (MQ=255)
                                                              gTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCgg                           >  1:567320/1‑93 (MQ=255)
                                                              gTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCgg                           >  2:6570491/1‑93 (MQ=255)
                                                              gTTACGTCGAACACGTTCAATGTAGCAGTCGGTTTGTCGATAAATCCCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCgg                           <  2:7795889/93‑1 (MQ=255)
                                                               ttACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCggg                          >  2:131581/1‑93 (MQ=255)
                                                               ttACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCggg                          >  1:10025802/1‑93 (MQ=255)
                                                                tACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGc                         <  1:3192868/93‑1 (MQ=255)
                                                                tACGGCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGc                         <  2:6756343/93‑1 (MQ=255)
                                                                 aCGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGcc                        >  1:9156062/1‑93 (MQ=255)
                                                                 aCGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGcc                        >  2:2966462/1‑93 (MQ=255)
                                                                  cGTCGAATGCGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCg                       >  1:2863899/1‑93 (MQ=255)
                                                                  cGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCg                       <  1:2091729/93‑1 (MQ=255)
                                                                  cGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCg                       >  1:4651853/1‑93 (MQ=255)
                                                                    tCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGAc                     <  2:5898021/93‑1 (MQ=255)
                                                                    tCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCAGAc                     >  2:3668034/1‑93 (MQ=255)
                                                                    tCGAATACGTTAAATGTCGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCATATTTTTGCCGACGGTCCAGGCCACCAGTTCCGGGCCGAc                     <  2:8178120/93‑1 (MQ=255)
                                                                       aaTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGAcgcg                  >  1:6829139/1‑93 (MQ=255)
                                                                       aaTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGAcgcg                  >  1:8488139/1‑93 (MQ=255)
                                                                       aaTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGAcgcg                  >  1:9387976/1‑93 (MQ=255)
                                                                       aaTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGATCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTTCGGGCCGAcgcg                  >  2:7232089/1‑93 (MQ=255)
                                                                        aTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGa                 >  2:1095963/1‑93 (MQ=255)
                                                                         tACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGAt                >  2:5853326/1‑93 (MQ=255)
                                                                          aCGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATa               <  1:1267980/93‑1 (MQ=255)
                                                                           cGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAg              <  1:9840532/93‑1 (MQ=255)
                                                                            gTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAgg             <  1:748844/93‑1 (MQ=255)
                                                                            gTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAgg             <  1:2765348/93‑1 (MQ=255)
                                                                              tCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcg           <  2:7976507/93‑1 (MQ=255)
                                                                              tCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcg           >  2:7549628/1‑93 (MQ=255)
                                                                               cAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcgg          >  1:3576017/1‑92 (MQ=255)
                                                                               cAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcgc          <  1:4535269/93‑1 (MQ=255)
                                                                                aaTGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGcgcg         >  2:2159988/1‑93 (MQ=255)
                                                                                    tAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATc     >  2:8555323/1‑93 (MQ=255)
                                                                                      gcagtCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCAc   >  2:2294549/1‑93 (MQ=255)
                                                                                       cagtCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCAcc  <  2:1055888/93‑1 (MQ=255)
                                                                                          |                                                                                         
ACCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGCCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCACC  >  NC_000913/888225‑888404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: