BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	969,798	T→C	L396P (CTC→CCC)	ycaQ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	969,798	0	T	C	99.2%	822.6 / NA	257	L396P (CTC→CCC)	ycaQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (129/125); minor base G (0/2); total (129/128)
Fisher's exact test for biased strand distribution p-value = 2.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 273 total aligned reads displayed.

CGCTGCAAAAAGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCTCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCATCTG  >  NC_000913/969708‑969887

cGCTGCAAAAAGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCccct                                                                                         >  2:7435510/1‑93 (MQ=255)

   tGCAAAAAGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTa                                                                                      <  2:6025264/93‑1 (MQ=255)

    gCAAAAAGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTAc                                                                                     <  1:9229353/93‑1 (MQ=255)

       aaaaGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGa                                                                                  >  2:4626337/1‑93 (MQ=255)

        aaaGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGAt                                                                                 >  2:6815588/1‑93 (MQ=255)

        aaaGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGAt                                                                                 >  2:4093650/1‑93 (MQ=255)

        aaaGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGAt                                                                                 >  1:7995685/1‑93 (MQ=255)

           gggCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGc                                                                              <  1:3545959/93‑1 (MQ=255)

             gCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGGTGATGCCCGCAAGACCCCTTTACTGATTGCCg                                                                            >  2:5141982/1‑93 (MQ=255)

             gCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCg                                                                            <  1:3656739/93‑1 (MQ=255)

               tACGTCAGGCGTTTACTGATTTCGCTAACTGGCAGCAGGCAACTCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTAATGACTGCCGCa                                                                          >  2:6167299/1‑93 (MQ=255)

                 cGTCAGGCGATTACTGATTTCGCTAACTGGCAGCATGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCAcc                                                                        >  2:1803549/1‑93 (MQ=255)

                   tCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCgg                                                                      >  1:1182/1‑93 (MQ=255)

                   tCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCgg                                                                      <  2:1499712/93‑1 (MQ=255)

                    cAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGc                                                                     >  2:3764755/1‑93 (MQ=255)

                    cAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGc                                                                     <  2:7304957/93‑1 (MQ=255)

                     aGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCt                                                                    <  1:4244490/93‑1 (MQ=255)

                     aGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCt                                                                    >  2:6520292/1‑93 (MQ=255)

                     aGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCt                                                                    <  2:5764607/93‑1 (MQ=255)

                     aGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCt                                                                    <  2:9158509/93‑1 (MQ=255)

                      ggCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTg                                                                   >  1:7482748/1‑93 (MQ=255)

                       gCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTgg                                                                  <  2:8124009/93‑1 (MQ=255)

                          aTTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGGCGCGCCGGCTGGGaa                                                               >  2:8350556/1‑93 (MQ=255)

                          aTTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGaa                                                               <  1:1313056/93‑1 (MQ=255)

                            tACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAAt                                                             >  1:8217224/1‑93 (MQ=255)

                            tACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAAt                                                             >  1:7877944/1‑93 (MQ=255)

                             aCTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATa                                                            <  1:723239/93‑1 (MQ=255)

                               tGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGa                                                          >  2:2748085/1‑93 (MQ=255)

                               tGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGa                                                          <  2:9733874/93‑1 (MQ=255)

                                  tttCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGAccc                                                       >  2:1111296/1‑93 (MQ=255)

                                    tCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCg                                                     <  2:9526068/93‑1 (MQ=255)

                                       cTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCg                                                  >  1:4655690/1‑93 (MQ=255)

                                       cTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATACACCCCGTCg                                                  >  1:8496556/1‑93 (MQ=255)

                                        tAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGc                                                 >  2:2633195/1‑93 (MQ=255)

                                         aaCTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTGCTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCa                                                >  1:6340470/1‑93 (MQ=255)

                                         aaCTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCa                                                >  1:4957207/1‑93 (MQ=255)

                                          aCTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCAt                                               >  1:5381735/1‑93 (MQ=255)

                                           cTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATa                                              >  1:3900814/1‑93 (MQ=255)

                                            tGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATaa                                             >  1:3065289/1‑93 (MQ=255)

                                            cggCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATaa                                             <  1:2074422/92‑1 (MQ=255)

                                             ggCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATaaa                                            >  1:6916939/1‑93 (MQ=255)

                                              gcagcaGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAAt                                           >  1:5055486/1‑93 (MQ=255)

                                              gcagcaGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAAt                                           <  2:346752/93‑1 (MQ=255)

                                              gcagcaGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAAt                                           <  1:344719/93‑1 (MQ=255)

                                               cagcagGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATg                                          <  1:5434969/93‑1 (MQ=255)

                                                  cagGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGAtt                                       >  2:9848047/1‑93 (MQ=255)

                                                   agGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTa                                      <  2:7791141/93‑1 (MQ=255)

                                                    ggCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTAt                                     <  1:4387854/93‑1 (MQ=255)

                                                     gCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATg                                    >  1:1620463/1‑93 (MQ=255)

                                                      cAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGa                                   <  2:8828008/93‑1 (MQ=255)

                                                       aaCGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCTCATAAATGATTATGAt                                  <  2:10044832/93‑1 (MQ=255)

                                                       aaCGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGaa                                  >  2:2057981/1‑92 (MQ=255)

                                                       aaCGCGGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGAt                                  >  2:6535919/1‑93 (MQ=255)

                                                         cgcgGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATaa                                <  2:4998872/93‑1 (MQ=255)

                                                           cgGGTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGa                              <  2:5546986/93‑1 (MQ=255)

                                                            gagTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGAt                             <  2:1594642/91‑1 (MQ=255)

                                                             ggTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGAtt                            >  2:8272432/1‑93 (MQ=255)

                                                             ggTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGAtt                            <  2:4619830/93‑1 (MQ=255)

                                                              gTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGGCCCCGTCGCATAAATGATTATGATAAGAttt                           >  2:2874890/1‑93 (MQ=255)

                                                              gTGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGAttt                           <  2:8573274/93‑1 (MQ=255)

                                                               tGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTa                          <  2:4107447/93‑1 (MQ=255)

                                                               tGACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCACACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGAtttt                          >  1:7915299/1‑92 (MQ=255)

                                                                gACATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTAt                         >  2:2547352/1‑93 (MQ=255)

                                                                 aCATTAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATg                        <  1:5426366/93‑1 (MQ=255)

                                                                   cttAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCa                      <  1:8086744/92‑1 (MQ=255)

                                                                    ttAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCAt                     <  2:3064641/93‑1 (MQ=255)

                                                                    ttAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCAt                     >  2:8050538/1‑93 (MQ=255)

                                                                    ttAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCAt                     >  1:9424690/1‑93 (MQ=255)

                                                                     tAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCAtt                    <  1:4054170/93‑1 (MQ=255)

                                                                     tAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCAtt                    <  1:6238882/93‑1 (MQ=255)

                                                                     tAGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCAtt                    <  1:654935/93‑1 (MQ=255)

                                                                      aGGATGCTGCCCGCAAGGCCGCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTc                   <  1:1021257/93‑1 (MQ=255)

                                                                      aGGATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTc                   <  2:5251960/93‑1 (MQ=255)

                                                                       ggATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCa                  >  1:4325999/1‑93 (MQ=255)

                                                                       ggATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCa                  <  1:950407/93‑1 (MQ=255)

                                                                        gATGCTGCCCGCAAGGCCCCTTTACTGATTGCCTCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCAt                 <  2:2140662/93‑1 (MQ=255)

                                                                        gATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCAt                 >  2:2109735/1‑93 (MQ=255)

                                                                        gATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCAt                 <  2:4208357/93‑1 (MQ=255)

                                                                        gATGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCAt                 >  2:761481/1‑93 (MQ=255)

                                                                         aTGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATa                <  1:2836330/93‑1 (MQ=255)

                                                                         aTGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATa                >  1:6822611/1‑93 (MQ=255)

                                                                         aTGCTGCCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATa                <  1:7162458/93‑1 (MQ=255)

                                                                          tgctgcCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCAtca               >  1:9196980/1‑91 (MQ=255)

                                                                           gctgcCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGCCCCCGTCGCATAAATGATTATGATAAGATTTATGACTTCATAAc              >  1:8320277/1‑93 (MQ=255)

                                                                           gctgcCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAAc              >  2:4019025/1‑93 (MQ=255)

                                                                            ctgcCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAAcc             <  1:5806678/93‑1 (MQ=255)

                                                                             tgcCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAAccc            <  2:6762972/93‑1 (MQ=255)

                                                                             cgcCCGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGGCCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAcccc            <  2:8838712/92‑1 (MQ=255)

                                                                               cccGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGa          <  1:240080/93‑1 (MQ=255)

                                                                               cccGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGa          >  2:4733117/1‑93 (MQ=255)

                                                                                ccGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATCAATGATTATGATAAGATTTATGCATTCATCACACgct         >  2:946298/1‑91 (MQ=255)

                                                                                ccGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATAATAAGATTTATGCATTCATAACCCGAt         <  2:33174/93‑1 (MQ=255)

                                                                                 cGCAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATc        >  2:694906/1‑93 (MQ=255)

                                                                                   cAAGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCa      >  2:8483725/1‑93 (MQ=255)

                                                                                    aaGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCAt     <  1:5198627/93‑1 (MQ=255)

                                                                                     aGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCATc    >  2:3824600/1‑93 (MQ=255)

                                                                                     aGGCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACACCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCATc    >  2:2328373/1‑93 (MQ=255)

                                                                                      ggCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCATCt   <  1:4017333/93‑1 (MQ=255)

                                                                                      ggCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCATCt   >  2:6384006/1‑93 (MQ=255)

                                                                                      ggCCCCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCATCt   <  2:4843014/93‑1 (MQ=255)

CGCTGCAAAAAGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCTCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAAATGATTATGATAAGATTTATGCATTCATAACCCGATCCATCTG  >  NC_000913/969708‑969887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`