BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	979,388	T→C	R1280R (CGT→CGC)	mukB →	MukB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	979,388	0	T	C	100.0%	961.8 / NA	298	R1280R (CGT→CGC)	mukB	MukB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/179); total (119/179)

Only 100 of 312 total aligned reads displayed.

CGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979298‑979477

cgAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGa                                                                                         <  1:9178/93‑1 (MQ=255)

  aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaaa                                                                                       <  2:8051080/93‑1 (MQ=255)

   gCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAac                                                                                      <  2:8311672/93‑1 (MQ=255)

    cAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacg                                                                                     <  1:8719144/93‑1 (MQ=255)

     aGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgc                                                                                    >  1:10020070/1‑93 (MQ=255)

       aaCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcac                                                                                  <  2:7735623/93‑1 (MQ=255)

        aCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacg                                                                                 <  2:10003928/93‑1 (MQ=255)

         ccgtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacgc                                                                                <  1:2445855/93‑1 (MQ=255)

         ccgtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacgc                                                                                <  1:3856781/93‑1 (MQ=255)

          cgtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGcc                                                                               >  2:4180303/1‑93 (MQ=255)

           gtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCa                                                                              <  1:4612040/93‑1 (MQ=255)

           gtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCa                                                                              <  1:292826/93‑1 (MQ=255)

           gtatccgtatGCTCAACCAGGGGTGGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCa                                                                              <  1:8653985/93‑1 (MQ=255)

              tccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGc                                                                           >  1:7380254/1‑93 (MQ=255)

               ccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCt                                                                          <  1:8562314/93‑1 (MQ=255)

                 gtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTAc                                                                        <  2:2472481/93‑1 (MQ=255)

                 gtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTAc                                                                        <  2:8715741/93‑1 (MQ=255)

                  tatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACt                                                                       >  2:2216798/1‑93 (MQ=255)

                    tGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTgg                                                                     <  1:99522/93‑1 (MQ=255)

                     gCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGa                                                                    <  2:8386478/93‑1 (MQ=255)

                       tCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtg                                                                  <  1:8080406/93‑1 (MQ=255)

                         aaCCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtgtg                                                                >  2:4475460/1‑93 (MQ=255)

                            cAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctc                                                             >  2:1097777/1‑93 (MQ=255)

                             aGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctct                                                            <  1:1134835/93‑1 (MQ=255)

                             aGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctct                                                            <  1:139034/93‑1 (MQ=255)

                              ggggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctc                                                           >  1:7193234/1‑93 (MQ=255)

                               gggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctct                                                          >  2:3258051/1‑93 (MQ=255)

                               gggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctct                                                          <  1:1893338/93‑1 (MQ=255)

                                ggTTGCAGAACGGATCGTTTGGTCAGGGTAACAGCGTGCGTCTCAACGTGAACTTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTg                                                         <  2:6851115/93‑1 (MQ=255)

                                 gTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGa                                                        >  1:2113082/1‑93 (MQ=255)

                                 gTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGa                                                        <  2:4814405/93‑1 (MQ=255)

                                  ttGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       <  2:5635955/93‑1 (MQ=255)

                                  ttGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       >  1:4713822/1‑93 (MQ=255)

                                   tGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAAc                                                      <  2:9332527/93‑1 (MQ=255)

                                   tGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAAc                                                      <  2:2706871/93‑1 (MQ=255)

                                   tGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTAAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAAc                                                      <  1:6536871/93‑1 (MQ=255)

                                   tGCAGAACGTATCGTTGGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAAc                                                      <  1:9793264/93‑1 (MQ=255)

                                    gCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACa                                                     <  1:4931860/93‑1 (MQ=255)

                                    gCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACa                                                     <  2:5836553/93‑1 (MQ=255)

                                    gCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACa                                                     <  2:2555527/93‑1 (MQ=255)

                                      aGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGc                                                   <  1:2620852/93‑1 (MQ=255)

                                       gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  <  1:6936556/93‑1 (MQ=255)

                                       gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  <  2:6439830/93‑1 (MQ=255)

                                        aaCGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCAc                                                 <  1:4303900/93‑1 (MQ=255)

                                         aCGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACg                                                >  1:3523756/1‑93 (MQ=255)

                                          cGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGa                                               <  2:2980392/93‑1 (MQ=255)

                                           gTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGag                                              >  2:6045248/1‑93 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             <  2:1904380/93‑1 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             >  1:6504755/1‑93 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             <  1:5821166/93‑1 (MQ=255)

                                             aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            >  2:810004/1‑93 (MQ=255)

                                             aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            >  1:2726401/1‑93 (MQ=255)

                                               tgTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagcagc                                          <  2:8271221/92‑1 (MQ=255)

                                                gTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAgcagca                                         >  2:6535880/1‑93 (MQ=255)

                                                gTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAgcagca                                         >  1:3412154/1‑93 (MQ=255)

                                                 tttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCAt                                        <  1:7828549/93‑1 (MQ=255)

                                                  ttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATc                                       <  2:2813725/93‑1 (MQ=255)

                                                  ttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATc                                       >  2:5933995/1‑93 (MQ=255)

                                                   tGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCa                                      >  2:8522821/1‑93 (MQ=255)

                                                   tGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCa                                      <  2:896972/93‑1 (MQ=255)

                                                   tGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCa                                      >  1:6658711/1‑93 (MQ=255)

                                                   tGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCa                                      <  1:8449304/93‑1 (MQ=255)

                                                   tGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCa                                      <  1:1558305/93‑1 (MQ=255)

                                                      tCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACGGCACGAGCAGCATCAGGa                                   <  2:6696756/93‑1 (MQ=255)

                                                      tCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGa                                   >  2:9562934/1‑93 (MQ=255)

                                                        atgTGAACAGCGTGCGTCTCAACGTGATCGTGCGCGAAACGCACGTCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATc                                 <  1:1213470/91‑1 (MQ=255)

                                                        aGGTGAACAGCGTGCGTCGCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATc                                 <  1:5536743/93‑1 (MQ=255)

                                                         ggTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCt                                <  1:7151398/93‑1 (MQ=255)

                                                         ggTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCt                                >  2:7869251/1‑93 (MQ=255)

                                                          gTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGACGTGCTCTCTGAACAGCACGAGCAGCATGACGATCTg                               >  2:7260297/1‑93 (MQ=255)

                                                           tGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGt                              <  2:701919/93‑1 (MQ=255)

                                                           tGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGt                              <  2:550418/93‑1 (MQ=255)

                                                             aaCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGttt                            >  1:5748082/1‑93 (MQ=255)

                                                             aaCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGttt                            >  2:6945830/1‑93 (MQ=255)

                                                                 gcgtgcgtCTCAACGTGCACGTGCGCGACACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAACATCAGGATCTGTTTaaaa                        <  1:8984819/93‑3 (MQ=255)

                                                                 gcgtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACa                        >  1:3326807/1‑93 (MQ=255)

                                                                   gtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGc                      <  2:6393945/93‑1 (MQ=255)

                                                                     gcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCaa                    >  2:3150766/1‑93 (MQ=255)

                                                                     gcgtCGCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCaa                    <  2:7593615/93‑1 (MQ=255)

                                                                      cgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAc                   >  2:7441469/1‑93 (MQ=255)

                                                                       gtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAcc                  <  1:6028994/93‑1 (MQ=255)

                                                                        tctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCg                 >  2:2341454/1‑93 (MQ=255)

                                                                        tctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCg                 >  2:3560787/1‑93 (MQ=255)

                                                                         ctcAACGTGAACATGCGCGAAGCGCACTTCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGt                <  2:407065/93‑1 (MQ=255)

                                                                          tcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGtt               >  1:5508886/1‑93 (MQ=255)

                                                                          tcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGtt               <  1:5053150/93‑1 (MQ=255)

                                                                          ccAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGtt               <  1:1413242/92‑1 (MQ=255)

                                                                           cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              <  1:4615938/93‑1 (MQ=255)

                                                                           cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              >  1:8281127/1‑93 (MQ=255)

                                                                              cgtgaacgtgCGCGAAATGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGAc           <  1:9376100/93‑1 (MQ=255)

                                                                                tgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCt         <  1:4675871/93‑1 (MQ=255)

                                                                                 gaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCtt        >  1:7543362/1‑93 (MQ=255)

                                                                                 gaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCtt        >  2:8891496/1‑93 (MQ=255)

                                                                                  aacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtc       <  2:1442591/93‑1 (MQ=255)

                                                                                  aacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtc       <  2:1982166/93‑1 (MQ=255)

                                                                                   acgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtct      >  1:4502406/1‑93 (MQ=255)

                                                                                    cgtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtctc     <  1:3924645/93‑1 (MQ=255)

                                                                                    cgtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtctc     <  2:9104001/93‑1 (MQ=255)

                                                                                     gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtctct    >  2:5227839/1‑92 (MQ=255)

                                                                                     gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCg    <  1:94929/93‑1 (MQ=255)

CGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979298‑979477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`