BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	985,663	A→G	G181G (GGT→GGC)	ompF ←	outer membrane protein 1a

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	985,663	0	A	G	100.0%	1032.7 / NA	322	G181G (GGT→GGC)	ompF	outer membrane protein 1a
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (149/173); total (149/173)

Only 100 of 331 total aligned reads displayed.

ACCAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTACCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCAAC  >  NC_000913/985573‑985752

aCCAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGcc                                                                                         >  1:1932804/1‑93 (MQ=255)

 ccAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGACCCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGccc                                                                                        <  2:5480854/93‑1 (MQ=255)

 ccAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGccc                                                                                        >  2:6424575/1‑93 (MQ=255)

 ccAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGccc                                                                                        >  1:3590158/1‑93 (MQ=255)

 ccAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGccc                                                                                        <  2:8611418/93‑1 (MQ=255)

  caacaaTAACAAGTCCTTCGTATTCGAAGCTGATGGAACCACAATCAACGTCACCGTTAGAAAGGCGTGCAGAGTCACGCTCGTTTTTGCCCa                                                                                       <  1:8934015/93‑1 (MQ=255)

   aaCGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAg                                                                                      <  1:8149840/93‑1 (MQ=255)

   aaCGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAg                                                                                      <  1:7281660/93‑1 (MQ=255)

    aCGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAgg                                                                                     >  1:9392358/1‑93 (MQ=255)

    aCGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAgg                                                                                     <  2:244341/93‑1 (MQ=255)

     cGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGt                                                                                    <  1:9970728/93‑1 (MQ=255)

      gATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTa                                                                                   <  2:1308664/93‑1 (MQ=255)

      gATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTa                                                                                   >  2:7437612/1‑93 (MQ=255)

       aTACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTAc                                                                                  >  1:2667057/1‑93 (MQ=255)

       aTACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTAc                                                                                  >  1:1694040/1‑93 (MQ=255)

          ccAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGa                                                                               <  1:4410688/93‑1 (MQ=255)

           cAAATCATTCGTATTCGTAGCTGATAGAACCGCCAACCCCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGaa                                                                              <  1:8661875/93‑1 (MQ=255)

           cAAAGCCTTCGTATTCGTAGCTGATAGATCCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGaa                                                                              <  2:7050317/93‑1 (MQ=255)

           cAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGaa                                                                              <  1:5346801/93‑1 (MQ=255)

            aaaGCATTCGTATTCGTAGCTGATAGAGCCGCCAACTCCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAAc                                                                             <  2:5164532/93‑1 (MQ=255)

             aaGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACa                                                                            <  1:6528263/93‑1 (MQ=255)

             aaGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACa                                                                            >  1:5664634/1‑93 (MQ=255)

             aaGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACa                                                                            >  1:7090668/1‑93 (MQ=255)

             aaGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACa                                                                            >  2:3287808/1‑93 (MQ=255)

             aaGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACa                                                                            >  2:9732675/1‑93 (MQ=255)

              aGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAg                                                                           <  2:2816543/93‑1 (MQ=255)

              aGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAg                                                                           <  1:7834942/93‑1 (MQ=255)

                  ttcgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGaa                                                                       >  2:5345799/1‑93 (MQ=255)

                  ttcgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGAGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGaa                                                                       >  1:6157492/1‑93 (MQ=255)

                   tcgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAg                                                                      <  1:8520719/93‑1 (MQ=255)

                   tcgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAg                                                                      <  2:4194088/93‑1 (MQ=255)

                     gtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGtt                                                                    <  1:4252057/93‑1 (MQ=255)

                     gtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGtt                                                                    <  2:7185346/93‑1 (MQ=255)

                       attcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCa                                                                  >  2:692740/1‑93 (MQ=255)

                        ttcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGATTTTGCCCAGGTACTGAACAGCGAAGTTCAg                                                                 >  1:8774429/1‑93 (MQ=255)

                             aGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCAt                                                            <  2:1083814/93‑1 (MQ=255)

                                tGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCaa                                                         >  1:8972265/1‑93 (MQ=255)

                                tGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCaa                                                         >  1:229182/1‑93 (MQ=255)

                                 gATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAAc                                                        >  2:4954826/1‑93 (MQ=255)

                                  aTAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAAcc                                                       >  2:4875480/1‑93 (MQ=255)

                                   tAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCa                                                      <  2:6821278/93‑1 (MQ=255)

                                   tAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCa                                                      <  1:4612651/93‑1 (MQ=255)

                                    aGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAg                                                     <  2:5753568/93‑1 (MQ=255)

                                    aGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAg                                                     >  2:7793712/1‑93 (MQ=255)

                                         cGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaa                                                >  2:1731057/1‑93 (MQ=255)

                                         cGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaa                                                <  2:3879508/93‑1 (MQ=255)

                                           ccAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaag                                              >  2:5668966/1‑93 (MQ=255)

                                           ccAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGACATCAATCAGACCAaag                                              >  1:241520/1‑93 (MQ=255)

                                           ccAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTAAACAGCGAAGTTCAGGCCATCAACCAGACCAaag                                              >  1:9527959/1‑93 (MQ=255)

                                            cAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaaga                                             <  1:669876/93‑1 (MQ=255)

                                             cacacCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaagaa                                            <  1:7476280/92‑1 (MQ=255)

                                             aaCACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaagaa                                            >  1:10004600/1‑93 (MQ=255)

                                              acacCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTGTGTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaagaag                                           <  2:4720513/93‑1 (MQ=255)

                                                 ccGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTg                                        >  2:5861784/1‑93 (MQ=255)

                                                 ccGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTg                                        >  2:8868203/1‑93 (MQ=255)

                                                    tCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGGTGGAg                                     >  2:4082755/1‑93 (MQ=255)

                                                     cGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGt                                    >  1:7695184/1‑93 (MQ=255)

                                                      gCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGtt                                   <  1:1470420/93‑1 (MQ=255)

                                                        cGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTAc                                 >  2:7574217/1‑93 (MQ=255)

                                                         gTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACg                                >  1:9683224/1‑93 (MQ=255)

                                                         cttAGAACGGCGTGCAGTATCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACg                                <  1:8275947/92‑1 (MQ=255)

                                                          ttAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGa                               >  2:156518/1‑93 (MQ=255)

                                                          ttAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGa                               <  2:2177157/93‑1 (MQ=255)

                                                          ttAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTAGAGTTACGa                               >  1:4432261/1‑93 (MQ=255)

                                                            aGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATa                             <  2:9181724/93‑1 (MQ=255)

                                                            aGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATa                             >  1:1092582/1‑93 (MQ=255)

                                                            aGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATa                             <  2:331826/93‑1 (MQ=255)

                                                                cGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTa                         <  1:5809623/93‑1 (MQ=255)

                                                                 ggCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAg                        <  2:82341/93‑1 (MQ=255)

                                                                 ggCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAg                        >  2:582862/1‑93 (MQ=255)

                                                                  gCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGc                       <  2:3572824/93‑1 (MQ=255)

                                                                  gCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGc                       <  2:6614283/93‑1 (MQ=255)

                                                                    gTGCGGTGTCACGCTCGTTTTTGGCCAGCTGCTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCaa                     <  1:4037368/93‑1 (MQ=25)

                                                                    gTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCaa                     <  1:467499/93‑1 (MQ=255)

                                                                    gTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCaa                     <  1:4753591/93‑1 (MQ=255)

                                                                    gTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCaa                     <  2:9015439/93‑1 (MQ=255)

                                                                     tGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAc                    >  2:9613816/1‑93 (MQ=255)

                                                                     tGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGATGGAGTTACGATAGGTAGCAAc                    >  1:2810973/1‑93 (MQ=255)

                                                                     ggCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAc                    <  2:8043332/92‑1 (MQ=255)

                                                                          tgtCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAcgccgc               >  2:2900829/1‑93 (MQ=255)

                                                                          tgtCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAcgccgc               <  1:8402228/93‑1 (MQ=255)

                                                                          tgtCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAcgccgc               >  1:8471383/1‑93 (MQ=255)

                                                                             cACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCaa            <  1:6849657/93‑1 (MQ=255)

                                                                              ccGCTCCGTTTTGCCCACGTACTGAACACCGAAGTTCAGCCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAac           <  1:3248211/92‑1 (MQ=21)

                                                                              aCGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAac           >  1:3352719/1‑93 (MQ=255)

                                                                              aCGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAac           <  1:9855080/93‑1 (MQ=255)

                                                                               cGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATGGGTAGCAACGCCGCCAaca          <  2:3101488/93‑1 (MQ=255)

                                                                               cGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAaca          <  2:443415/93‑1 (MQ=255)

                                                                               cGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAaca          <  1:5122641/93‑1 (MQ=255)

                                                                               cGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAaca          >  1:7778902/1‑93 (MQ=255)

                                                                               cGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAaca          <  1:3936157/93‑1 (MQ=255)

                                                                                gCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAacac         <  2:3455491/93‑1 (MQ=255)

                                                                                gCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAacac         <  1:6267827/93‑1 (MQ=255)

                                                                                 cTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACg        >  1:4165791/1‑93 (MQ=255)

                                                                                 cTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACg        >  1:8045863/1‑93 (MQ=255)

                                                                                 cTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACg        >  1:9567991/1‑93 (MQ=255)

                                                                                  tCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCATCCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGa       <  1:3192055/93‑1 (MQ=255)

                                                                                  tCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGa       >  2:8317752/1‑93 (MQ=255)

                                                                                   cGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGAc      <  2:6335666/93‑1 (MQ=255)

                                                                                     tttttGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCa    >  1:1262854/1‑93 (MQ=255)

ACCAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTACCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCAAC  >  NC_000913/985573‑985752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`