Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 987,323 C→T A296T (GCC→ACC)  asnS ← asparagine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913987,3230CT99.5% 1256.0 / ‑4.8 368A296T (GCC→ACC) asnSasparagine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base T (162/202);  total (165/203)
Fisher's exact test for biased strand distribution p-value = 2.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.07e-01

Only 100 of 385 total aligned reads displayed.

TTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG  >  NC_000913/987232‑987412
                                                                                           |                                                                                         
 tCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTAt                                                                                         <  2:6147380/93‑1 (MQ=255)
 tCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTAt                                                                                         >  2:6413559/1‑93 (MQ=255)
   cTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCTGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCt                                                                                       <  2:2951468/93‑1 (MQ=255)
   cTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGGATCt                                                                                       >  2:5430344/1‑93 (MQ=255)
    tGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCtt                                                                                      >  2:2107795/1‑93 (MQ=255)
    tGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCtt                                                                                      >  1:7817704/1‑93 (MQ=255)
      ccGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTa                                                                                    <  2:1964044/93‑1 (MQ=255)
        gCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATc                                                                                  >  1:1920806/1‑93 (MQ=255)
         cAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCt                                                                                 <  1:3823635/93‑1 (MQ=255)
          aGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTa                                                                                <  2:8437516/93‑1 (MQ=255)
           gTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAc                                                                               >  2:8743473/1‑93 (MQ=255)
           gTTTTAGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAc                                                                               <  1:2542248/93‑1 (MQ=255)
            ttttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcg                                                                              >  2:3951688/1‑93 (MQ=255)
             tttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcgc                                                                             <  1:6664011/93‑1 (MQ=255)
             tttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcgc                                                                             >  2:7898290/1‑93 (MQ=255)
                 gagaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTc                                                                         <  2:626859/93‑1 (MQ=255)
                 gagaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTc                                                                         <  1:5769029/93‑1 (MQ=255)
                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        <  1:9877328/93‑1 (MQ=255)
                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        >  1:8470831/1‑93 (MQ=255)
                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        <  1:9464836/93‑1 (MQ=255)
                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        >  2:4411637/1‑93 (MQ=255)
                   gaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAg                                                                       >  2:7538376/1‑93 (MQ=255)
                    aaTGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGc                                                                      <  1:7429490/93‑1 (MQ=255)
                    aaTGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGc                                                                      <  1:8370086/93‑1 (MQ=255)
                      tGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCga                                                                    >  1:9656858/1‑93 (MQ=255)
                      tGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCga                                                                    >  1:2548041/1‑93 (MQ=255)
                       ggTCCCGGCGTCGGTAAAATCCACCGGCCAAAATTCGCCTTAAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaa                                                                   <  1:755197/93‑1 (MQ=255)
                         gcACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaaga                                                                 <  2:7168451/92‑1 (MQ=255)
                           aCTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAt                                                               >  1:1544169/1‑93 (MQ=255)
                             tGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAttt                                                             >  1:993829/1‑93 (MQ=255)
                             tGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAttt                                                             >  2:6598536/1‑93 (MQ=255)
                              gCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTc                                                            >  2:1195184/1‑93 (MQ=255)
                               cGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCa                                                           <  2:2271955/93‑1 (MQ=255)
                                gTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAt                                                          >  1:3141845/1‑93 (MQ=255)
                                gTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAt                                                          <  1:4188866/93‑1 (MQ=255)
                                  cGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAATCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgt                                                        <  2:8619849/93‑1 (MQ=255)
                                  cGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgt                                                        <  1:7785881/93‑1 (MQ=255)
                                  cGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgt                                                        >  2:2602216/1‑93 (MQ=255)
                                      ataATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtcgtc                                                    >  1:3299014/1‑93 (MQ=255)
                                      ataATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtcgtc                                                    <  1:3629812/93‑1 (MQ=255)
                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtcgtcg                                                   >  1:8605435/1‑92 (MQ=255)
                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCa                                                   <  2:2723996/93‑1 (MQ=255)
                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCa                                                   <  1:9018182/93‑1 (MQ=255)
                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCa                                                   <  1:6626212/93‑1 (MQ=255)
                                          tCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAgcg                                                >  1:1938706/1‑93 (MQ=255)
                                             cccTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             <  1:498537/92‑1 (MQ=255)
                                             aCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             >  1:2222035/1‑93 (MQ=255)
                                              ccTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTa                                                                                >  1:1633539/1‑57 (MQ=255)
                                              ccTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGtt                                            >  1:7727642/1‑93 (MQ=255)
                                               cTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttc                                           >  2:2084678/1‑93 (MQ=255)
                                               cTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttc                                           >  1:8232000/1‑93 (MQ=255)
                                               cTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttc                                           <  1:8397893/93‑1 (MQ=255)
                                                 gcgcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttctt                                         <  1:4325437/93‑1 (MQ=255)
                                                 gcgcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttctt                                         <  2:9486276/93‑1 (MQ=255)
                                                   gcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCg                                       <  1:7929902/93‑1 (MQ=255)
                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTTAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    <  2:4667803/93‑1 (MQ=255)
                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    >  1:4093263/1‑93 (MQ=255)
                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    >  2:490856/1‑93 (MQ=255)
                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGAGTTCTTCgaga                                    >  1:4222855/1‑93 (MQ=255)
                                                       aaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGaa                                   <  1:6202471/93‑1 (MQ=255)
                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAc                                  <  2:6760935/93‑1 (MQ=255)
                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAc                                  <  1:5567086/93‑1 (MQ=255)
                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAc                                  >  2:9577440/1‑93 (MQ=255)
                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCCTCGAGAAc                                  <  2:3440365/93‑1 (MQ=255)
                                                         tCGGCTTCAATGAAGCGTTCCAGACGTGGAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAcc                                 >  1:10014832/1‑93 (MQ=255)
                                                          cGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCg                                <  2:1805452/93‑1 (MQ=255)
                                                           ggCTTCAATGAAGCGTTCGAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGc                               <  2:9879/93‑1 (MQ=255)
                                                            gCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCt                              >  1:3930186/1‑93 (MQ=255)
                                                             cTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCtt                             >  1:2902434/1‑93 (MQ=255)
                                                             cTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCtt                             <  1:4573874/93‑1 (MQ=255)
                                                                 aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGTAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         <  2:5980588/93‑1 (MQ=255)
                                                                 aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         >  1:2668424/1‑93 (MQ=255)
                                                                 aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         >  1:7185950/1‑93 (MQ=255)
                                                                  aTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAg                        >  2:8084719/1‑93 (MQ=255)
                                                                   tGAAGCGTTCCAGACGCGAAACAGTAACTTTTTCTATTTGTTCATGGAAAAATTTAATATAGCCCGCACGTAATTCGACAACTGCATTGACGa                       >  2:358611/1‑93 (MQ=255)
                                                                    gAAGCGTTCCGGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGAc                      <  1:5311452/93‑1 (MQ=255)
                                                                    gAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGAc                      >  2:3113869/1‑93 (MQ=255)
                                                                     aaGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACa                     <  2:7654998/93‑1 (MQ=255)
                                                                      aGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACat                    <  1:1232045/93‑1 (MQ=255)
                                                                      aGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACat                    <  2:1681353/93‑1 (MQ=255)
                                                                       gCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACata                   >  2:4642582/1‑93 (MQ=255)
                                                                       gCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACata                   >  1:8151807/1‑93 (MQ=255)
                                                                          ttCCAGACGTGACACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATAttt                <  2:5139025/93‑1 (MQ=255)
                                                                          ttCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATAttt                <  2:5612856/93‑1 (MQ=255)
                                                                           tCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTc               <  2:9244219/93‑1 (MQ=255)
                                                                            ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              >  2:3316866/1‑93 (MQ=255)
                                                                            ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              <  2:3789527/93‑1 (MQ=255)
                                                                            ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              <  1:608851/93‑1 (MQ=255)
                                                                              aGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGc            >  1:5509951/1‑93 (MQ=255)
                                                                               gACGTGAAACGGGATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCa           <  1:1859440/93‑1 (MQ=255)
                                                                               aaagTGAAACGGTATCTTTAGTTACGCGTGAAGCGAAGAAGTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCa           <  1:1460510/90‑1 (MQ=255)
                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          >  1:4867909/1‑93 (MQ=255)
                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          <  1:8697222/93‑1 (MQ=255)
                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          <  1:6152750/93‑1 (MQ=255)
                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          <  2:607490/93‑1 (MQ=255)
                                                                                   agAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTACGAGAACAGCTTTGAAGACATATTTCAGCATGGc       <  2:6934321/92‑1 (MQ=255)
                                                                                     aaaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCtt     <  2:5282110/93‑1 (MQ=255)
                                                                                      aaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTc    <  2:152206/93‑1 (MQ=255)
                                                                                      aaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTc    >  1:6774087/1‑93 (MQ=255)
                                                                                       aCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCa   <  1:2395171/93‑1 (MQ=255)
                                                                                           |                                                                                         
TTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG  >  NC_000913/987232‑987412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: