BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,048,676	A→G	S104P (TCC→CCC)	ymcD ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,048,676	0	A	G	99.6%	877.9 / ‑5.0	277	S104P (TCC→CCC)	ymcD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (125/150); total (125/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01

Only 100 of 283 total aligned reads displayed.

AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC  >  NC_000913/1048584‑1048764

aaTGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGa                                                                                          >  1:6443992/1‑93 (MQ=255)

    cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg                                                                                      <  1:68702/93‑1 (MQ=255)

    cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg                                                                                      <  2:2240309/93‑1 (MQ=255)

    cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg                                                                                      <  1:2410538/93‑1 (MQ=255)

     aaaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg                                                                                     >  2:6656304/1‑93 (MQ=255)

     aaaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg                                                                                     <  2:10029272/93‑1 (MQ=255)

     aaaTCTCGAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg                                                                                     <  1:8689342/93‑1 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    <  2:8599609/93‑1 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    >  2:6325031/1‑93 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCAGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    >  1:8111649/1‑93 (MQ=255)

      aaTCTCTAAAGCCCGGTACGAATATCGCAACCAGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                    <  2:1181128/93‑1 (MQ=255)

       aTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggtg                                                                                   <  1:9468472/93‑1 (MQ=255)

        tctcTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGtggtgg                                                                                  >  2:2681427/1‑93 (MQ=255)

         ctctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTggtggt                                                                                 <  2:506976/93‑1 (MQ=255)

           ctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTg                                                                               >  2:9160263/1‑93 (MQ=255)

            tAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTgg                                                                              >  1:3514271/1‑92 (MQ=255)

            tAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGa                                                                              <  2:188106/93‑1 (MQ=255)

            tAAAGCCCGGTACGAATATCGCAACCGGGCATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGCTGGTTGa                                                                              >  2:227146/1‑93 (MQ=255)

            tAAAGCCCAGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGa                                                                              <  1:903897/93‑1 (MQ=255)

             aaaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAg                                                                             >  2:5183695/1‑93 (MQ=255)

              aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                            <  1:4180575/93‑1 (MQ=255)

              aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                            >  1:4664336/1‑93 (MQ=255)

              aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                            <  2:4933968/93‑1 (MQ=255)

               aGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgt                                                                           <  1:3787366/93‑1 (MQ=255)

               aGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgt                                                                           >  1:8742484/1‑93 (MQ=255)

                gCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgtg                                                                          >  1:5958082/1‑93 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  1:6823161/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       >  2:6381578/1‑93 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  2:6848330/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  1:7964056/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       <  1:3082299/93‑1 (MQ=255)

                   cGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                       >  1:224521/1‑93 (MQ=255)

                    ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAt                                                                      <  1:6230898/93‑1 (MQ=255)

                    ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAt                                                                      >  1:5115320/1‑93 (MQ=255)

                    ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAt                                                                      >  1:6961428/1‑93 (MQ=255)

                      tACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATga                                                                    <  2:88034/93‑1 (MQ=255)

                        cGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATgaga                                                                  >  1:4494601/1‑93 (MQ=255)

                        cGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATgaga                                                                  <  2:7526635/93‑1 (MQ=255)

                          aaTATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAc                                                                <  1:9660577/93‑1 (MQ=255)

                             atCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGc                                                             >  2:3974733/1‑93 (MQ=255)

                               cGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCa                                                           <  1:1670196/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  1:7728739/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  2:5561773/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  2:1515558/93‑1 (MQ=255)

                                gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          <  1:4054301/93‑1 (MQ=255)

                                gCAACCGGGGATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                          >  2:2837817/1‑93 (MQ=255)

                                 cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc                                                         <  2:3603007/93‑1 (MQ=255)

                                 cAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATc                                                         <  1:1937932/93‑1 (MQ=255)

                                   aCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGc                                                       >  1:5047207/1‑93 (MQ=255)

                                    ccGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGcc                                                      <  2:6447515/93‑1 (MQ=255)

                                    ccGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGcc                                                      >  1:10030307/1‑93 (MQ=255)

                                     cGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCa                                                     <  1:8402111/93‑1 (MQ=255)

                                      gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc                                                    <  2:6959681/93‑1 (MQ=255)

                                        gTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTg                                                  >  1:5540195/1‑93 (MQ=255)

                                          aTCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTc                                                >  2:7938660/1‑93 (MQ=255)

                                            cATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAt                                              <  2:6082257/93‑1 (MQ=255)

                                             aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAGCGCCATCGCCACTGTCAtt                                             >  2:7077985/1‑93 (MQ=255)

                                             aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt                                             <  2:3051249/93‑1 (MQ=255)

                                             aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt                                             >  1:4740767/1‑93 (MQ=255)

                                               ttAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtg                                           >  2:4382090/1‑93 (MQ=255)

                                                tAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgc                                          <  2:9080401/93‑1 (MQ=255)

                                                tAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgc                                          <  1:7376902/93‑1 (MQ=255)

                                                 aaCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgct                                         <  1:5280856/93‑1 (MQ=255)

                                                 aaCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgct                                         <  2:3382917/93‑1 (MQ=255)

                                                  aCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgctg                                        >  1:6263200/1‑93 (MQ=255)

                                                   cTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgctgc                                       <  2:2519484/93‑1 (MQ=255)

                                                   cTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgctgc                                       <  2:5367309/93‑1 (MQ=255)

                                                     ttAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaa                                     >  1:961387/1‑93 (MQ=255)

                                                      tAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaac                                    <  2:3240376/93‑1 (MQ=255)

                                                      tAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaac                                    <  1:9211560/93‑1 (MQ=255)

                                                       aaTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaaca                                   <  1:359574/93‑1 (MQ=255)

                                                        aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGCGAACCGCCATCGCCACTGTCATTTGCTGcaacaa                                  >  2:4678789/1‑93 (MQ=255)

                                                        aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaacaa                                  <  1:1285576/93‑1 (MQ=255)

                                                         tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                 >  1:4428579/1‑93 (MQ=255)

                                                         tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                 <  2:7555699/93‑1 (MQ=255)

                                                         tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                 <  1:4539628/93‑1 (MQ=255)

                                                           tCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTg                               >  1:2781588/1‑93 (MQ=255)

                                                            cGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGc                              >  1:2180414/1‑93 (MQ=255)

                                                             gACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGCACCGCCATCGCCACTGTCATTTGCTGCAACAACTGcc                             >  1:7187898/1‑93 (MQ=255)

                                                             gACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGcc                             >  2:826516/1‑93 (MQ=255)

                                                              aCGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCa                            <  1:620934/93‑1 (MQ=255)

                                                               cgcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCaa                           <  1:210351/93‑1 (MQ=255)

                                                               cgcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCaa                           <  2:7384795/93‑1 (MQ=255)

                                                                gcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAAc                          >  1:1863931/1‑93 (MQ=255)

                                                                  gTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGt                        <  1:1145927/93‑1 (MQ=255)

                                                                   ttAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTc                       <  2:9841492/93‑1 (MQ=255)

                                                                          aGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCacac                >  2:9241236/1‑93 (MQ=255)

                                                                           gTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc               >  1:1436706/1‑93 (MQ=255)

                                                                            tATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCa              <  1:2525817/93‑1 (MQ=255)

                                                                              ttAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAAc            <  1:8571632/93‑1 (MQ=255)

                                                                              ttAGCGTGTAGTGGGCGTGGTGATTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCAGCAACAACTACCAACGTCGCCACCCCacc            <  1:8939262/93‑3 (MQ=255)

                                                                               tAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACa           <  2:457268/93‑1 (MQ=255)

                                                                               tAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACa           >  2:8512818/1‑93 (MQ=255)

                                                                                 gCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGc         <  2:1422946/93‑1 (MQ=255)

                                                                                 gCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGc         <  1:5908369/93‑1 (MQ=255)

                                                                                  cGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGcc        <  2:2340654/93‑1 (MQ=255)

                                                                                  cGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGcc        <  2:7581701/93‑1 (MQ=255)

                                                                                    tgtAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGt      <  2:5756517/93‑1 (MQ=255)

                                                                                      tAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTg    >  1:5979592/1‑93 (MQ=255)

                                                                                        gTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGcc  <  1:7550907/93‑1 (MQ=255)

AATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCC  >  NC_000913/1048584‑1048764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`