BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,061,601	T→C	C194R (TGC→CGC)	torD →	TorD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,061,601	0	T	C	99.4%	1018.8 / ‑5.6	320	C194R (TGC→CGC)	torD	TorD
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (146/171); total (148/172)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 335 total aligned reads displayed.

TGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCG  >  NC_000913/1061511‑1061690

tGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAgcgc                                                                                         <  2:7030033/93‑1 (MQ=255)

tGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAgcgc                                                                                         >  1:1321485/1‑93 (MQ=255)

tGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAgcgc                                                                                         >  2:8913854/1‑93 (MQ=255)

tGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAgcgc                                                                                         >  2:1200937/1‑93 (MQ=255)

 ggTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGcgcg                                                                                        >  1:4749110/1‑93 (MQ=255)

   ttACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGac                                                                                      >  1:5449513/1‑93 (MQ=255)

   ttACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGac                                                                                      >  2:8319692/1‑93 (MQ=255)

    tACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGacc                                                                                     >  1:5666906/1‑93 (MQ=255)

      ccAGAGTTTGTTGCGCGTTGTCGTCAGTATGACCGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGaccac                                                                                   <  1:9707303/93‑1 (MQ=255)

      ccAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGaccac                                                                                   <  1:5247890/93‑1 (MQ=255)

       cAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGaccacc                                                                                  >  1:6076023/1‑93 (MQ=255)

        agagTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGAccacca                                                                                 >  1:8509670/1‑93 (MQ=255)

           gTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCaaaa                                                                              >  1:7497423/1‑93 (MQ=255)

           gTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCaaaa                                                                              <  1:4573409/93‑1 (MQ=255)

            tttGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAAc                                                                             >  1:10044248/1‑93 (MQ=255)

             ttgttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACa                                                                            <  2:6241908/93‑1 (MQ=255)

               gttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGa                                                                          >  1:2791140/1‑93 (MQ=255)

               gttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGa                                                                          <  1:1634431/93‑1 (MQ=255)

               gttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGa                                                                          >  1:1492186/1‑93 (MQ=255)

                ttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGAt                                                                         >  2:8280715/1‑93 (MQ=255)

                ttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGAt                                                                         <  2:4492371/93‑1 (MQ=255)

                ttgCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGAAGAGCGCGACCACCAAAACAAAt                                                                         <  1:8972461/93‑1 (MQ=255)

                  gcgcGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATaa                                                                       <  1:740002/93‑1 (MQ=255)

                  gcgcGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATaa                                                                       <  1:6541384/93‑1 (MQ=255)

                  gcgcGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATaa                                                                       <  1:5339048/93‑1 (MQ=255)

                    gcgTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcg                                                                     <  2:9283540/93‑1 (MQ=255)

                    gcgTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcg                                                                     <  1:5604454/93‑1 (MQ=255)

                     cgTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgt                                                                    <  1:3966449/93‑1 (MQ=255)

                       ttGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgtcg                                                                  <  1:5620749/93‑1 (MQ=255)

                       ttGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgtcg                                                                  >  1:1624742/1‑93 (MQ=255)

                       ttGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgtag                                                                  >  1:7700512/1‑91 (MQ=255)

                        tGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAAcgtcgt                                                                 >  2:6042535/1‑93 (MQ=255)

                           cgtcAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTtg                                                              <  2:1802404/93‑1 (MQ=255)

                           cgtcAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTtg                                                              <  1:3391199/93‑1 (MQ=255)

                             tcAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTtgtg                                                            <  1:6954377/93‑1 (MQ=255)

                              cAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTgc                                                           <  2:9797832/93‑1 (MQ=255)

                              cAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTgc                                                           <  2:9858870/93‑1 (MQ=255)

                               aGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTgcg                                                          >  2:3870941/1‑93 (MQ=255)

                                 tATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGcc                                                        >  1:4486227/1‑93 (MQ=255)

                                   tGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTg                                                      >  2:2368071/1‑93 (MQ=255)

                                   tGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTg                                                      >  2:4884956/1‑93 (MQ=255)

                                    gACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGa                                                     <  2:5637030/93‑1 (MQ=255)

                                     aCAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaa                                                    <  1:6301722/93‑1 (MQ=255)

                                      cAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaaa                                                   >  1:2993766/1‑93 (MQ=255)

                                       aGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaaaa                                                  <  2:5991173/93‑1 (MQ=255)

                                       aGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaaaa                                                  <  1:3225743/93‑1 (MQ=255)

                                       aGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGaaaa                                                  >  1:5068648/1‑93 (MQ=255)

                                        gCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAg                                                 >  1:6648041/1‑93 (MQ=255)

                                        gCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAg                                                 >  2:3111456/1‑93 (MQ=255)

                                         cTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGa                                                <  1:4190335/93‑1 (MQ=255)

                                         cTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGa                                                <  1:228062/93‑1 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                               <  1:9777865/93‑1 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                               <  1:5410367/93‑1 (MQ=255)

                                          tttGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc                                               <  2:461612/93‑1 (MQ=255)

                                             ggTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcgcg                                            >  1:241547/1‑93 (MQ=255)

                                              gTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGt                                           >  2:3585153/1‑93 (MQ=255)

                                              gTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGt                                           >  2:6650616/1‑93 (MQ=255)

                                              gTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGt                                           >  1:7984004/1‑93 (MQ=255)

                                               tttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGtt                                          <  2:8769453/93‑1 (MQ=255)

                                               tttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGtt                                          >  1:7168673/1‑93 (MQ=255)

                                                ttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGttt                                         <  2:4246438/93‑1 (MQ=255)

                                                 tttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTa                                        <  1:6926475/93‑1 (MQ=255)

                                                 tttACGCGGCACTAAACCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTa                                        <  2:9447067/93‑1 (MQ=255)

                                                     cgcgGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGt                                    <  2:7752838/93‑1 (MQ=255)

                                                          cACTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCAt                               >  2:8088139/1‑93 (MQ=255)

                                                           aCTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATc                              <  1:1677081/93‑1 (MQ=255)

                                                           aCTAAGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATc                              <  2:6747028/93‑1 (MQ=255)

                                                              aaGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAgg                           <  2:1609656/93‑1 (MQ=255)

                                                              aaGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAgg                           >  1:2598419/1‑93 (MQ=255)

                                                              aaGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAgg                           <  1:5966037/93‑1 (MQ=255)

                                                               aGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGc                          <  1:9218771/93‑1 (MQ=255)

                                                               aGCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGc                          <  1:8295695/93‑1 (MQ=255)

                                                                gCCAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa                         <  1:2040276/93‑1 (MQ=255)

                                                                  cAGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCAtt                       >  2:7566313/1‑93 (MQ=255)

                                                                   aGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa                      <  1:2707188/93‑1 (MQ=255)

                                                                   aGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa                      <  2:9613912/93‑1 (MQ=255)

                                                                   aGTTATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa                      >  1:9444336/1‑93 (MQ=255)

                                                                     ttATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg                    >  2:8863678/1‑93 (MQ=255)

                                                                     ttATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg                    <  2:2876029/93‑1 (MQ=255)

                                                                      tATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATgg                   <  2:3426656/93‑1 (MQ=255)

                                                                      tATTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATgg                   <  2:8495836/93‑1 (MQ=255)

                                                                       aTTGCTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgc                  <  1:3439323/93‑1 (MQ=255)

                                                                           cTGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAg              <  2:8580383/93‑1 (MQ=255)

                                                                            tGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGt             <  2:7374256/93‑1 (MQ=255)

                                                                            tGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGt             <  1:1861894/93‑1 (MQ=255)

                                                                            tGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGt             <  2:504540/93‑1 (MQ=255)

                                                                            tGGTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGt             <  1:735173/93‑1 (MQ=255)

                                                                             ggTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGtt            <  2:5464833/93‑1 (MQ=255)

                                                                             ggTGTTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGtt            <  2:5546681/93‑1 (MQ=255)

                                                                              gtgtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTg           <  2:2427861/93‑1 (MQ=255)

                                                                               tgtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGc          >  2:7236640/1‑93 (MQ=255)

                                                                               tgtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGc          >  2:909377/1‑93 (MQ=255)

                                                                                gtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGcc         <  1:4816465/93‑1 (MQ=255)

                                                                                gtTAGTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGcc         <  1:3838996/93‑1 (MQ=255)

                                                                                    ggggAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGAt     <  2:7791481/91‑1 (MQ=255)

                                                                                    gTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGAt     <  1:8812955/93‑1 (MQ=255)

                                                                                    gTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGAt     <  1:9967600/93‑1 (MQ=255)

                                                                                    gTGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGAt     <  2:265769/93‑1 (MQ=255)

                                                                                     tGGAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATg    >  1:1137612/1‑93 (MQ=255)

                                                                                       gAGCGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATgcg  <  2:2059194/93‑1 (MQ=255)

TGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCG  >  NC_000913/1061511‑1061690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`