BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,138,203	A→G	Q201Q (CAA→CAG)	flgK →	hook‑filament junction protein 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,138,203	0	A	G	100.0%	710.7 / NA	217	Q201Q (CAA→CAG)	flgK	hook‑filament junction protein 1
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (88/129); total (88/129)

Only 100 of 229 total aligned reads displayed.

TACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAA  >  NC_000913/1138114‑1138292

tACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAgcgc                                                                                        <  1:1690474/93‑1 (MQ=255)

tACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAgcgc                                                                                        >  1:6324307/1‑93 (MQ=255)

tACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAgcgc                                                                                        >  1:4445692/1‑93 (MQ=255)

tACGCTAAACAAAATGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAgcgc                                                                                        >  1:5714626/1‑93 (MQ=255)

 aCGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGcgcg                                                                                       >  1:8256910/1‑93 (MQ=255)

  cGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGa                                                                                      >  2:8711366/1‑93 (MQ=255)

   gCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGAt                                                                                     >  1:8772908/1‑93 (MQ=255)

    cTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATc                                                                                    <  1:4005896/93‑1 (MQ=255)

     tAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCa                                                                                   >  2:1623543/1‑93 (MQ=255)

      aaaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCaa                                                                                  <  2:401255/93‑1 (MQ=255)

      aaaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCCCGATCaa                                                                                  >  1:9817750/1‑93 (MQ=255)

       aaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAAc                                                                                 <  1:3315128/93‑1 (MQ=255)

        aCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACt                                                                                <  1:2442738/93‑1 (MQ=255)

        aCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACt                                                                                >  2:6398337/1‑93 (MQ=255)

           aaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGt                                                                             >  2:7747988/1‑93 (MQ=255)

            aTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTg                                                                            >  1:8683696/1‑93 (MQ=255)

            aTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTg                                                                            >  2:4794035/1‑93 (MQ=255)

             ttGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGa                                                                           <  1:2097928/93‑1 (MQ=255)

             ttGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGa                                                                           >  2:960791/1‑93 (MQ=255)

             ttGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACATAACAATCTGCTGGATCAGCGCGATCAACTGGTGa                                                                           <  2:7724878/93‑1 (MQ=255)

              tGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAg                                                                          <  2:3505783/93‑1 (MQ=255)

              tGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAg                                                                          <  2:7480980/93‑1 (MQ=255)

               gCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGc                                                                         <  2:816008/93‑1 (MQ=255)

                   gCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAAt                                                                     >  1:9706180/1‑93 (MQ=255)

                    ccTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAAtt                                                                    <  1:705950/93‑1 (MQ=255)

                    ccTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAAtt                                                                    <  2:97371/93‑1 (MQ=255)

                     cTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTa                                                                   <  2:5753950/93‑1 (MQ=255)

                       gAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTaaa                                                                 >  1:9003004/1‑93 (MQ=255)

                        aaCGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAAc                                                                <  1:7922389/93‑1 (MQ=255)

                         aCGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAACTAAAcc                                                               <  2:9879899/93‑1 (MQ=255)

                          cGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCa                                                              >  2:3734229/1‑93 (MQ=255)

                           gATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAg                                                             <  2:234792/93‑1 (MQ=255)

                                aaTCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgt                                                        <  2:4534458/93‑1 (MQ=255)

                                 aTCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgtt                                                       <  2:1784572/93‑1 (MQ=255)

                                 aTCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgtt                                                       >  1:838545/1‑93 (MQ=255)

                                  tctcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgttg                                                      <  1:62527/93‑1 (MQ=255)

                                    tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt                                                    <  2:9059195/93‑1 (MQ=255)

                                    tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt                                                    >  2:5201767/1‑93 (MQ=255)

                                    tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt                                                    <  2:7145184/93‑1 (MQ=255)

                                     cgcgCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGGTCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgtg                                                   <  2:8080032/93‑1 (MQ=255)

                                     cgcgCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgtg                                                   <  1:6920063/93‑1 (MQ=255)

                                        gcCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAg                                                <  1:75385/93‑1 (MQ=255)

                                         cgtGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGa                                               <  1:3257652/91‑1 (MQ=255)

                                         ccTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTGGa                                               <  1:1839740/93‑1 (MQ=255)

                                         ccTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGa                                               <  1:5127056/93‑1 (MQ=255)

                                         ccTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGa                                               <  1:5178955/93‑1 (MQ=255)

                                         ccTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGa                                               <  2:1343429/93‑1 (MQ=255)

                                          cTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGaa                                              >  1:5243917/1‑93 (MQ=255)

                                           tGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAg                                             <  2:4931203/93‑1 (MQ=255)

                                            gACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGCTCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGGGTAGAAgc                                            >  1:3179786/1‑92 (MQ=255)

                                            gACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGt                                            >  1:8012633/1‑93 (MQ=255)

                                             aCAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTc                                           <  1:6544024/93‑1 (MQ=255)

                                              cAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCa                                          <  2:2260148/93‑1 (MQ=255)

                                              cAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCa                                          <  2:8884503/93‑1 (MQ=255)

                                              aaGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCa                                          <  1:8298361/92‑1 (MQ=255)

                                                  cGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGt                                      <  1:5400198/93‑1 (MQ=255)

                                                    tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    <  1:3681454/93‑1 (MQ=255)

                                                    tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc                                    >  2:2864161/1‑93 (MQ=255)

                                                     gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa                                   <  2:8345301/93‑1 (MQ=255)

                                                     gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa                                   <  1:3412604/93‑1 (MQ=255)

                                                        ggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGa                                <  1:5646529/93‑1 (MQ=255)

                                                         gCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGAt                               <  1:4774499/93‑1 (MQ=255)

                                                          cAGGGGCGTCACCGAACAGTCGGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGGTCAGGATg                              <  2:4139451/93‑1 (MQ=255)

                                                           aGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATgg                             >  1:5768558/1‑93 (MQ=255)

                                                            gggtCGCCACTTAACATTCTGCTGGATCAGCGCAATCAACTGGTGAGCAAATAAACCCAGTTTTTTGGTGTAGAAGTCAGCGTTCAGGATggc                            <  2:27519/93‑1 (MQ=255)

                                                            ggggCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATggc                            >  2:1067014/1‑93 (MQ=255)

                                                            ggggCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGAGTTCAGGATggc                            >  2:6725898/1‑93 (MQ=255)

                                                             gggCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATggcg                           <  2:5882360/93‑1 (MQ=255)

                                                             gggCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATggcg                           >  1:7238223/1‑93 (MQ=255)

                                                              gacGTCACCTAACAAGCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATggcgg                          <  1:7428567/91‑1 (MQ=255)

                                                               gCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATggcggc                         <  1:6708024/93‑1 (MQ=255)

                                                                cGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCa                        <  1:7723684/93‑1 (MQ=255)

                                                                cGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCa                        >  1:417244/1‑93 (MQ=255)

                                                                 gTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCAc                       >  1:3032310/1‑93 (MQ=255)

                                                                  tCACCTAACAATCTGCTGGATCAGCGGGATCAACTGGTGAGCAAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACt                      <  2:3949782/93‑1 (MQ=255)

                                                                  tCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACt                      >  1:3805385/1‑93 (MQ=255)

                                                                    cccTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta                    <  2:1911515/92‑1 (MQ=255)

                                                                    aCCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta                    <  1:4737777/93‑1 (MQ=255)

                                                                      cTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTtata                  >  2:3197551/1‑93 (MQ=255)

                                                                      cTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTtata                  <  2:783893/93‑1 (MQ=255)

                                                                       tAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATaa                 <  2:5155097/93‑1 (MQ=255)

                                                                       tAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATaa                 <  1:2346508/93‑1 (MQ=255)

                                                                         aCAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACa               <  1:1036818/93‑1 (MQ=255)

                                                                            aTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCa            <  1:2568967/93‑1 (MQ=255)

                                                                            aTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCa            >  1:8509309/1‑93 (MQ=255)

                                                                            aTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCa            <  2:6517409/93‑1 (MQ=255)

                                                                            aTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCa            <  2:8524518/93‑1 (MQ=255)

                                                                            aTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCa            <  2:5579868/93‑1 (MQ=255)

                                                                             tCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCAc           <  2:6602976/93‑1 (MQ=255)

                                                                             tCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCAc           <  2:368221/93‑1 (MQ=255)

                                                                               tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGGTGGCGGCACTTATAACATCACGa         <  2:5563858/93‑1 (MQ=255)

                                                                               tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa         <  2:7051424/93‑1 (MQ=255)

                                                                               tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa         <  2:4843909/93‑1 (MQ=255)

                                                                                gctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGAt        >  2:5254132/1‑93 (MQ=255)

                                                                                 ctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATg       <  1:6498587/93‑1 (MQ=255)

                                                                                  tgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATgg      >  1:9588265/1‑93 (MQ=255)

                                                                                   ggATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGc     >  1:3563690/1‑93 (MQ=255)

                                                                                    gATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGcc    >  1:3605162/1‑93 (MQ=255)

                                                                                    gATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGcc    >  2:2691436/1‑93 (MQ=255)

                                                                                      tCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCaa  >  2:2092224/1‑93 (MQ=255)

TACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAA  >  NC_000913/1138114‑1138292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`