BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,173,983	C→T	G136R (GGG→AGG)	ycfT ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,173,983	0	C	T	99.6%	850.7 / ‑5.8	231	G136R (GGG→AGG)	ycfT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (105/125); minor base G (0/1); total (105/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 238 total aligned reads displayed.

GCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAC  >  NC_000913/1173893‑1174072

gCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGt                                                                                         <  2:2952943/93‑1 (MQ=255)

 cAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCtgtg                                                                                        >  2:5365650/1‑93 (MQ=255)

   gcgcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCa                                                                                      <  2:1336106/93‑1 (MQ=255)

   gcgcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCa                                                                                      <  1:1487452/93‑1 (MQ=255)

     gcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAgg                                                                                    >  2:245012/1‑93 (MQ=255)

      ccAGACTGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATCCCACAATCTGGTGCTGGCGGTGATCATCCTGTGCAGGa                                                                                   <  2:7768277/93‑1 (MQ=255)

      ccAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGa                                                                                   <  1:1615900/93‑1 (MQ=255)

      ccAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGa                                                                                   <  2:4075104/93‑1 (MQ=255)

       cAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGaa                                                                                  >  2:9175652/1‑93 (MQ=255)

           cGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTTCTGGCGGTGATCATCCTGTGCAGGCACTCa                                                                              >  2:2173294/1‑93 (MQ=255)

           cGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCa                                                                              >  2:8386137/1‑93 (MQ=255)

           cGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCa                                                                              >  1:6357209/1‑93 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             >  1:305947/1‑93 (MQ=255)

             gcgaaaaaTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAcc                                                                            <  1:2435318/90‑1 (MQ=255)

             gCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAcc                                                                            <  1:8906785/93‑1 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCgg                                                                          >  2:9702918/1‑93 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCgg                                                                          >  2:865286/1‑93 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCgg                                                                          <  1:1419213/93‑1 (MQ=255)

                aaaaaTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGt                                                                         >  2:9088575/1‑93 (MQ=255)

                   aaTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGa                                                                      >  1:9448687/1‑93 (MQ=255)

                     ttttACATACCACGAAATAGGCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAAt                                                                    <  2:5557650/93‑1 (MQ=255)

                     ttttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAAt                                                                    >  2:5074741/1‑93 (MQ=255)

                     atttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAAt                                                                    <  1:6032785/92‑1 (MQ=255)

                      tttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATc                                                                   <  1:1354440/93‑1 (MQ=255)

                        tACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCgg                                                                 >  1:6623355/1‑93 (MQ=255)

                        tACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCgg                                                                 >  2:1254371/1‑93 (MQ=255)

                         tcATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGc                                                                <  1:3161645/92‑1 (MQ=255)

                         aCATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGc                                                                <  2:754036/93‑1 (MQ=255)

                           aTACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCAt                                                              <  1:7415499/93‑1 (MQ=255)

                           aTACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCAt                                                              >  1:8329598/1‑93 (MQ=255)

                            tACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATa                                                             >  1:339721/1‑93 (MQ=255)

                            tACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATa                                                             >  1:4797785/1‑93 (MQ=255)

                            tACCACGAAATAGACAATTAACCCATACAGATACCACAAGCTGGGGCTGGCGGTGATCATCCTGTCCAGGAACTCACCGGTGGAATCGGCATa                                                             <  1:870844/93‑1 (MQ=255)

                             aCCGCGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATaa                                                            >  1:263429/1‑93 (MQ=255)

                             aCCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATaa                                                            <  1:7174895/93‑1 (MQ=255)

                              ccACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAg                                                           <  2:8100237/93‑1 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAgg                                                          >  2:3417394/1‑92 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGc                                                          <  1:1129318/93‑1 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGc                                                          <  1:5924842/93‑1 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACACACCGGTGGAATCGGCATAAGc                                                          <  2:5417649/93‑1 (MQ=255)

                                 cGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCgg                                                        <  2:6903267/93‑1 (MQ=255)

                                 cGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCgg                                                        <  1:495071/93‑1 (MQ=255)

                                   aaaTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCa                                                      <  1:708250/93‑1 (MQ=255)

                                   aaaTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCa                                                      >  1:3742551/1‑93 (MQ=255)

                                     aTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAtt                                                    <  1:2987049/93‑1 (MQ=255)

                                     aTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAtg                                                    >  1:2525399/1‑92 (MQ=255)

                                      tAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTg                                                   >  1:4431287/1‑93 (MQ=255)

                                      aaGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTg                                                   <  1:9889958/92‑1 (MQ=255)

                                        gACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGa                                                 >  2:4396553/1‑93 (MQ=255)

                                        gACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGa                                                 <  2:1768762/93‑1 (MQ=255)

                                        gACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGAATTGGa                                                 >  2:4760006/1‑93 (MQ=255)

                                         aCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAg                                                <  2:7302534/93‑1 (MQ=255)

                                         aCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAg                                                <  2:4925233/93‑1 (MQ=255)

                                           aaTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGc                                              <  1:7332016/93‑1 (MQ=255)

                                           aaTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGc                                              >  1:7794745/1‑93 (MQ=255)

                                             ttAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCAt                                            <  1:9745877/93‑1 (MQ=255)

                                             ttAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCAt                                            <  2:1697989/93‑1 (MQ=255)

                                             ttAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCAt                                            <  2:8313912/93‑1 (MQ=255)

                                              tAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCAtt                                           <  2:3919989/93‑1 (MQ=255)

                                                 cGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCt                                        <  1:9176934/93‑1 (MQ=255)

                                                  gCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCtt                                       <  1:3479648/93‑1 (MQ=255)

                                                  gCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCtt                                       <  2:547552/93‑1 (MQ=255)

                                                   cATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTa                                      >  1:6072756/1‑93 (MQ=255)

                                                   cATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTa                                      <  2:3521896/93‑1 (MQ=255)

                                                   cATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTa                                      <  2:2706540/93‑1 (MQ=255)

                                                    aTACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaa                                     >  1:5348318/1‑93 (MQ=255)

                                                    aTACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaa                                     >  2:2205309/1‑93 (MQ=255)

                                                     tACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaaa                                    >  1:1895979/1‑93 (MQ=255)

                                                      aCAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAt                                   >  2:425867/1‑93 (MQ=255)

                                                       cAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATc                                  >  1:4600068/1‑93 (MQ=255)

                                                        aGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcg                                 <  2:7232372/93‑1 (MQ=255)

                                                         gATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcgc                                >  2:5994326/1‑93 (MQ=255)

                                                         gATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcgc                                <  2:2045381/93‑1 (MQ=255)

                                                         gATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcgc                                <  1:2348805/93‑1 (MQ=255)

                                                           tACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCgcgc                              <  2:9712384/93‑1 (MQ=255)

                                                           tACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCgcgc                              >  2:4368324/1‑93 (MQ=255)

                                                             ccACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTc                            >  1:10021132/1‑93 (MQ=255)

                                                                caAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAgg                         >  2:6315243/1‑93 (MQ=255)

                                                                caAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAgg                         <  2:6581392/93‑1 (MQ=255)

                                                                 aaGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGt                        <  2:6743239/93‑1 (MQ=255)

                                                                  aGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTg                       <  1:2041049/93‑1 (MQ=255)

                                                                    cTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgcc                     >  1:7612265/1‑93 (MQ=255)

                                                                      ggTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccag                   >  1:2755681/1‑93 (MQ=255)

                                                                        tGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagcc                 <  2:3670821/93‑1 (MQ=255)

                                                                        tGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagcc                 <  1:6852617/93‑1 (MQ=255)

                                                                         gCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagcca                <  1:2832698/93‑1 (MQ=255)

                                                                             gCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTgg            <  1:5443928/93‑1 (MQ=255)

                                                                             gCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTgg            >  1:4835343/1‑93 (MQ=255)

                                                                              cGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAAGTGCCAGCCACTGGt           >  1:5496868/1‑93 (MQ=255)

                                                                                gTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTc         >  2:1556294/1‑93 (MQ=255)

                                                                                gTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTc         <  1:4219779/93‑1 (MQ=255)

                                                                                 tGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCa        >  1:5084154/1‑93 (MQ=255)

                                                                                  gATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAg       >  1:1268361/1‑93 (MQ=255)

                                                                                   atcatcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAgc      >  1:1942059/1‑93 (MQ=255)

                                                                                   agattcCTGTGCAGGAACTCACCGGTGGGATCGGCATAAGCGGCCTTGGAGGCATTGCTTAAATCGCGATAAGGGGCCAGCCAGTGTGTCAgc      >  2:3165244/5‑93 (MQ=255)

                                                                                     catcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAgcgc    >  2:9503652/1‑93 (MQ=255)

                                                                                      atcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCa   <  2:6254854/93‑1 (MQ=255)

                                                                                      atcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCa   >  1:8089223/1‑93 (MQ=255)

                                                                                       tcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAc  >  1:853275/1‑93 (MQ=255)

                                                                                       tcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAc  >  2:2544204/1‑93 (MQ=255)

GCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAC  >  NC_000913/1173893‑1174072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`