Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,308,235 T→C H20R (CAC→CGC)  kch ← putative potassium channel protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,308,2350TC90.6% 880.1 / 67.6 339H20R (CAC→CGC) kchputative potassium channel protein
Reads supporting (aligned to +/- strand):  ref base T (22/10);  new base C (181/126);  total (203/136)
Fisher's exact test for biased strand distribution p-value = 3.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 354 total aligned reads displayed.

TGGAAAATATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGTTTAATTAT  >  NC_000913/1308145‑1308327
                                                                                          |                                                                                            
tGGAAAATATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCgcgc                                                                                            >  2:7655400/1‑93 (MQ=255)
tGGAAAATATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCgcgc                                                                                            <  2:3630587/93‑1 (MQ=255)
 ggAAAATATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGcc                                                                                           >  1:2721824/1‑93 (MQ=255)
  gAAAATATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCg                                                                                          >  1:8279119/1‑93 (MQ=255)
   aaaaTATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGa                                                                                         >  1:8919786/1‑93 (MQ=255)
   aaaaTATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGa                                                                                         <  2:5854554/93‑1 (MQ=255)
    aaaTATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGGATGTCGCGCCGaa                                                                                        >  2:1291711/1‑93 (MQ=255)
    aaaTATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGaa                                                                                        >  2:2542030/1‑93 (MQ=255)
       tatCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGCCCAGCGCGAGAATGTCGTGCCGAAggg                                                                                     <  1:5817980/93‑1 (MQ=255)
        atCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGt                                                                                    <  2:8115182/93‑1 (MQ=255)
        atCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGt                                                                                    <  2:8255699/93‑1 (MQ=255)
         tCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTc                                                                                   <  2:3840476/93‑1 (MQ=255)
         tCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTc                                                                                   >  2:3337260/1‑93 (MQ=255)
          cAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCa                                                                                  >  2:1489792/1‑93 (MQ=255)
            aGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGGGAGAATGTCGCGCCGAAGGGTCAcc                                                                                <  1:4883723/93‑1 (MQ=255)
             gCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTATAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCAccc                                                                               >  2:1691265/1‑93 (MQ=255)
             gCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCAccc                                                                               <  1:1156504/93‑1 (MQ=255)
               aaaTTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCACCCAt                                                                             >  2:617236/1‑93 (MQ=255)
               aaaTTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCAt                                                                             <  1:7076431/93‑1 (MQ=255)
                aaTTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATa                                                                            >  2:1234250/1‑93 (MQ=255)
                aaTTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATa                                                                            >  2:3225246/1‑93 (MQ=255)
                aaTTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATa                                                                            <  1:964263/93‑1 (MQ=255)
                aaTTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATa                                                                            <  1:136127/93‑1 (MQ=255)
                 aTTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATaa                                                                           >  2:10028611/1‑93 (MQ=255)
                    gACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATACAtt                                                                        >  1:1492009/1‑93 (MQ=255)
                    gACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAAtt                                                                        >  1:951188/1‑93 (MQ=255)
                    gACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAAtt                                                                        >  1:5653296/1‑93 (MQ=255)
                      ccGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATttg                                                                      <  2:5013901/93‑1 (MQ=255)
                      ccGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATttg                                                                      >  1:4805313/1‑93 (MQ=255)
                       cGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCACCCATAAATttgt                                                                     >  2:3937376/1‑93 (MQ=255)
                       cGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATttgt                                                                     >  1:4324453/1‑93 (MQ=255)
                       cGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATttgt                                                                     <  2:4010889/93‑1 (MQ=255)
                         aCATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCACCCATAAATttgttg                                                                   >  2:2019270/1‑93 (MQ=255)
                          cATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGc                                                                  >  1:108434/1‑93 (MQ=255)
                           aTACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCt                                                                 >  1:922484/1‑93 (MQ=255)
                           aTACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCt                                                                 <  2:4591723/93‑1 (MQ=255)
                             aCCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCtgt                                                               >  2:7320105/1‑93 (MQ=255)
                              ccATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTGACCCATAAATTTGTTGCtgtt                                                              <  2:6801007/93‑1 (MQ=255)
                              ccATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCtgtt                                                              <  1:3174518/93‑1 (MQ=255)
                               cATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCtgttt                                                             >  1:7312924/1‑93 (MQ=255)
                                aTAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCtgtttg                                                            >  2:6859634/1‑93 (MQ=255)
                                 tAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCtgtttgt                                                           >  2:2115156/1‑93 (MQ=255)
                                 tAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCtgtttgt                                                           >  1:8528671/1‑93 (MQ=255)
                                    aTTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGtttgtttg                                                        >  2:6656218/1‑93 (MQ=255)
                                     ttGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGa                                                       >  1:5943394/1‑93 (MQ=255)
                                       gTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAAt                                                     <  1:7776769/93‑1 (MQ=255)
                                        ttttAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATg                                                    >  1:6364885/1‑93 (MQ=255)
                                         tttAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGt                                                   >  1:4094081/1‑93 (MQ=255)
                                          ttAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCACCCATAGATTTGTTGCTGTTTGTTTGAATGTa                                                  >  2:9711065/1‑93 (MQ=255)
                                          ttAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTa                                                  <  1:3022043/93‑1 (MQ=255)
                                          ttAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTa                                                  <  2:2785692/93‑1 (MQ=255)
                                            aaaaaTAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGc                                                >  1:6934207/1‑93 (MQ=255)
                                             aaaaTAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGcc                                               >  1:4970142/1‑93 (MQ=255)
                                             aaaaTAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGcc                                               <  2:1839825/93‑1 (MQ=255)
                                               aaTAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCa                                             <  2:6547835/93‑1 (MQ=255)
                                                aTAAGCAATCCATTTAAAAAGACGGCCCGCGCGAGAATGTCGTGCCGGAGGGTCAGCCATAAATCTGTTGCTGTTTGTTTGAATGTAGCCCAg                                            >  2:6437687/1‑93 (MQ=255)
                                                aTAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAg                                            <  2:5679875/93‑1 (MQ=255)
                                                aTAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAg                                            >  1:553875/1‑93 (MQ=255)
                                                   aGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGa                                         >  2:4282647/1‑93 (MQ=255)
                                                      aaTCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTc                                      >  2:9133931/1‑93 (MQ=255)
                                                       aTCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCa                                     >  1:8807195/1‑93 (MQ=255)
                                                       aTCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCa                                     >  1:6590157/1‑93 (MQ=255)
                                                       aTCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCa                                     >  1:4032443/1‑93 (MQ=255)
                                                        tCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCAc                                    >  1:5345529/1‑93 (MQ=255)
                                                         ccATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACt                                   <  1:4637467/93‑1 (MQ=255)
                                                          cATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTg                                  <  2:141812/93‑1 (MQ=255)
                                                          cATTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTAACTg                                  >  1:3456551/1‑93 (MQ=255)
                                                           aTTTAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGa                                 <  2:9403912/93‑1 (MQ=255)
                                                              tAAAAAGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATAc                              <  1:8216209/93‑1 (MQ=255)
                                                               aaaaaGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATAcc                             >  1:3203002/1‑93 (MQ=255)
                                                               aaaaaGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATAcc                             <  1:2334391/93‑1 (MQ=255)
                                                                aaaaGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACct                            >  1:3797542/1‑93 (MQ=255)
                                                                 aaaGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACctc                           <  1:6854015/93‑1 (MQ=255)
                                                                 aaaGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACctc                           <  1:5478699/93‑1 (MQ=255)
                                                                 aaaGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACctc                           <  2:5435372/93‑1 (MQ=255)
                                                                  aaGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACctct                          <  1:1822556/93‑1 (MQ=255)
                                                                  aaGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGGCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACctct                          >  1:7562744/1‑93 (MQ=255)
                                                                   aGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCCGTGACTCACTGATACCTCTg                         >  1:7168529/1‑93 (MQ=255)
                                                                   aGACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTg                         >  2:4681875/1‑93 (MQ=255)
                                                                    gACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGt                        >  1:6806534/1‑93 (MQ=255)
                                                                    gACGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGt                        >  1:7996204/1‑93 (MQ=255)
                                                                     aCGGCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTa                       <  1:2547835/93‑1 (MQ=255)
                                                                       ggCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAAc                     >  2:4740687/1‑93 (MQ=255)
                                                                        gCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAAcc                    >  2:5974035/1‑93 (MQ=255)
                                                                        gCCAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAAcc                    >  2:8633731/1‑93 (MQ=255)
                                                                         ccAGCGCGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACca                   >  1:6474867/1‑93 (MQ=255)
                                                                            gcgcGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACaa                >  1:6121644/1‑93 (MQ=255)
                                                                            gcgcGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACaa                >  2:8832898/1‑93 (MQ=255)
                                                                            gcgcGAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACaa                >  2:2240265/1‑93 (MQ=255)
                                                                             cgcgAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAAt               <  2:1146295/93‑1 (MQ=255)
                                                                               cgAGAATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAAttt             >  1:9361627/1‑93 (MQ=255)
                                                                                gagaATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAAtttt            >  1:9945350/1‑93 (MQ=255)
                                                                                 agaATGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTg           >  1:4538798/1‑93 (MQ=255)
                                                                                   aaTGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGtt         >  1:6219904/1‑93 (MQ=255)
                                                                                    aTGTCGCGCCGAAGGGTCACCCGTAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGttt        <  2:9549975/93‑1 (MQ=255)
                                                                                     tGTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGTTTa       >  2:921709/1‑93 (MQ=255)
                                                                                      gTCGTGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGTTTaa      >  2:7968017/1‑93 (MQ=255)
                                                                                      gTCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGTTTaa      <  1:2971766/93‑1 (MQ=255)
                                                                                       tCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGTTTAAt     >  2:7379993/1‑93 (MQ=255)
                                                                                       tCGCGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGTTTAAt     <  2:7165453/93‑1 (MQ=255)
                                                                                          |                                                                                            
TGGAAAATATCAAGCAAATTGACCGACATACCATAGATTGTTTTAAAAATAAGCAATCCATTTAAAAAGACGGCCAGCGCGAGAATGTCGTGCCGAAGGGTCACCCATAAATTTGTTGCTGTTTGTTTGAATGTAGCCCAGTGACTCACTGATACCTCTGTAACCACAATTTTGTTTAATTAT  >  NC_000913/1308145‑1308327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: