Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 126,160 A→G T156A (ACC→GCC)  aceF → pyruvate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913126,1600AG100.0% 1064.3 / NA 330T156A (ACC→GCC) aceFpyruvate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (151/179);  total (151/179)

Only 100 of 332 total aligned reads displayed.

AAAGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCACCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCG  >  NC_000913/126070‑126249
                                                                                          |                                                                                         
 aaGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCg                                                                                        <  2:1431936/93‑1 (MQ=255)
  aGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATTACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGt                                                                                       >  1:9072574/1‑93 (MQ=255)
  aGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGt                                                                                       >  1:6236437/1‑93 (MQ=255)
  aGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGt                                                                                       <  2:5731581/93‑1 (MQ=255)
   gTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTg                                                                                      >  1:8071583/1‑93 (MQ=255)
    ttGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGa                                                                                     >  1:1752065/1‑93 (MQ=255)
      ggCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGaaa                                                                                   <  1:9117418/93‑1 (MQ=255)
      ggCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGaaa                                                                                   <  1:10017268/93‑1 (MQ=255)
       gCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAag                                                                                  <  1:6845919/93‑1 (MQ=255)
        cGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAaga                                                                                 <  1:4743808/93‑1 (MQ=255)
           tAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGAt                                                                              >  1:5490538/1‑93 (MQ=255)
           tAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGAt                                                                              >  1:971477/1‑93 (MQ=255)
            aaaGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATc                                                                             >  1:114832/1‑93 (MQ=255)
             aaGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCa                                                                            <  1:7307060/93‑1 (MQ=255)
             aaGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCa                                                                            <  2:7652119/93‑1 (MQ=255)
               gTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCaaa                                                                          <  1:2508066/93‑1 (MQ=255)
               gTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCaaa                                                                          >  2:8213577/1‑93 (MQ=255)
                ttGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCACAg                                                                         >  2:5787412/1‑93 (MQ=255)
                ttGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAg                                                                         <  2:2581505/93‑1 (MQ=255)
                ttGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAg                                                                         >  2:330431/1‑93 (MQ=255)
                ttGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAg                                                                         >  1:559027/1‑93 (MQ=255)
                   aaGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAgaga                                                                      <  1:442029/93‑1 (MQ=255)
                   aaGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGa                                                                      <  2:3905761/93‑1 (MQ=255)
                    aGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGaa                                                                     <  2:4577909/93‑1 (MQ=255)
                     gCTGATCAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAAc                                                                    <  2:1338962/93‑1 (MQ=255)
                     gCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAAc                                                                    <  1:6600763/93‑1 (MQ=255)
                      cTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACg                                                                   <  1:1610822/93‑1 (MQ=255)
                       tGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGt                                                                  >  2:4209633/1‑93 (MQ=255)
                        gAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTg                                                                 >  2:5374459/1‑93 (MQ=255)
                          aCAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTggg                                                               >  2:4168966/1‑93 (MQ=255)
                          aCAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTggg                                                               <  2:5918426/93‑1 (MQ=255)
                           cAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGATAGAGATCAAAGTGAACGTGGGt                                                              >  1:9305643/1‑93 (MQ=255)
                            aGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTg                                                             <  1:9564543/93‑1 (MQ=255)
                             gTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGa                                                            >  2:3745834/1‑93 (MQ=255)
                             gTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGa                                                            <  1:7774918/93‑1 (MQ=255)
                              tCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGCACGTGGGTGAc                                                           >  1:4858114/1‑93 (MQ=255)
                              tCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGAc                                                           <  1:4076162/93‑1 (MQ=255)
                                 cTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACaaa                                                        <  2:48142/93‑1 (MQ=255)
                                  tGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAg                                                       >  2:3045056/1‑93 (MQ=255)
                                  tGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAg                                                       <  2:8686159/93‑1 (MQ=255)
                                  tGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGAAAAAAGTGAACGTGGGTGACAAAg                                                       <  2:710046/93‑1 (MQ=21)
                                   gATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAgt                                                      >  2:8522288/1‑93 (MQ=255)
                                    aTCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAgtg                                                     <  1:1954258/93‑1 (MQ=255)
                                     tCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAgtgt                                                    <  1:8998248/93‑1 (MQ=255)
                                     tCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAgtgt                                                    >  2:5662061/1‑93 (MQ=255)
                                     tCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAgtgt                                                    <  2:1106209/93‑1 (MQ=255)
                                     tCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAgtgt                                                    <  2:3586177/93‑1 (MQ=255)
                                      cACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAgtgta                                                   >  2:6662989/1‑92 (MQ=255)
                                      cACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTc                                                   <  1:6114124/93‑1 (MQ=255)
                                        ccGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCtc                                                 >  2:7506412/1‑92 (MQ=255)
                                        ccGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTa                                                 <  1:9830225/93‑1 (MQ=255)
                                        ccGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTa                                                 <  2:9373269/93‑1 (MQ=255)
                                            aGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCgg                                             <  2:9455589/93‑1 (MQ=255)
                                             gAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGc                                            >  1:2142241/1‑93 (MQ=255)
                                              aaGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCt                                           <  2:9760913/93‑1 (MQ=255)
                                                ggCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTcc                                         >  1:5843788/1‑92 (MQ=255)
                                                ggCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTcc                                         >  2:4265434/1‑92 (MQ=255)
                                                 gCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTccc                                        >  2:7175923/1‑91 (MQ=255)
                                                 gCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGc                                        >  1:460707/1‑93 (MQ=255)
                                                 gCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGc                                        <  1:4295777/93‑1 (MQ=255)
                                                   gACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTg                                      >  1:3028250/1‑93 (MQ=255)
                                                    aCAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCtca                                     >  1:7967826/1‑91 (MQ=255)
                                                     cAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGAt                                    <  1:5262793/93‑1 (MQ=255)
                                                        ggCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTAt                                 <  2:5174764/93‑1 (MQ=255)
                                                        ggCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTAt                                 <  1:3535031/93‑1 (MQ=255)
                                                           ttCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGCTTATGGt                              >  1:8818246/1‑93 (MQ=255)
                                                           ttCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATggg                              >  2:1538046/1‑92 (MQ=255)
                                                           ttCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGt                              >  2:6250869/1‑93 (MQ=255)
                                                            tCTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTc                             <  1:1791746/93‑1 (MQ=255)
                                                             cTATGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCt                            <  2:8027662/93‑1 (MQ=255)
                                                                tGGAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCg                         <  1:3886199/93‑1 (MQ=255)
                                                                 ggAAGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGa                        <  2:7372725/93‑1 (MQ=255)
                                                                   aaGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAg                      >  2:3543155/1‑93 (MQ=255)
                                                                    aGTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGt                     <  2:2468787/93‑1 (MQ=255)
                                                                     gTTCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGGGACAAAGTGTCTACCGGCTCGCTGCTTTTGGGCTTCGAAGTc                    >  1:8268117/1‑93 (MQ=255)
                                                                       tCCGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTcgc                  <  2:6544987/93‑1 (MQ=255)
                                                                        ccGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTcgcg                 <  2:6869397/93‑1 (MQ=255)
                                                                        ccGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTcgcg                 <  1:9905496/93‑1 (MQ=255)
                                                                         cGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATTGTCTTCGAAGTCGCgg                >  1:373751/1‑93 (MQ=255)
                                                                         cGGCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCgg                >  2:7429255/1‑93 (MQ=255)
                                                                          ggCTCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCggg               <  1:2599193/93‑1 (MQ=255)
                                                                             tCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGa            <  2:9662261/93‑1 (MQ=255)
                                                                             tCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGa            <  1:9629543/93‑1 (MQ=255)
                                                                             tCCGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGGCGCGGGGGa            >  2:3455310/1‑93 (MQ=255)
                                                                              ccGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTgta           >  2:7802905/1‑91 (MQ=255)
                                                                               cGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAg          <  2:8343698/93‑1 (MQ=255)
                                                                               cGTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAg          >  2:8873022/1‑93 (MQ=255)
                                                                                gTTTGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGCTTATGGTCTTCCAAGTCGCGGGGGAAGc         >  1:1484471/1‑93 (MQ=255)
                                                                                 tttGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAgga        >  1:3369999/1‑91 (MQ=255)
                                                                                 tttGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCa        <  2:5498904/93‑1 (MQ=255)
                                                                                  ttGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAg       <  1:7627038/93‑1 (MQ=255)
                                                                                  ttGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAg       <  1:135286/93‑1 (MQ=255)
                                                                                   tGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATTGTCTTCGAAGTCGCGGGTGGAGCAgg      >  2:9518380/1‑93 (MQ=255)
                                                                                   tGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAgg      <  1:4569930/93‑1 (MQ=255)
                                                                                   tGCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAgg      <  2:9118326/93‑1 (MQ=255)
                                                                                    gCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGgc     <  2:4939492/93‑1 (MQ=255)
                                                                                    gCTGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGgc     <  2:1905639/93‑1 (MQ=255)
                                                                                      tGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTTTTCTCAATTGCGGGCGAAGAAggacg   >  2:638795/1‑90 (MQ=255)
                                                                                      tGGCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGGCTTCGAAGTCGCGGGTGGAGCAGgcgc   >  1:8688741/1‑93 (MQ=255)
                                                                                       ggCGCCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTTGAAGTCGCGGGTGAAGAAGGggcg  >  1:2046874/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAAGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCACCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCG  >  NC_000913/126070‑126249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: