BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,356,924	C→T	P96P (CCG→CCA)	ycjJ ←	putative amino acid/amine transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,356,924	0	C	T	100.0%	760.7 / NA	215	P96P (CCG→CCA)	ycjJ	putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (134/81); total (134/81)

Only 100 of 226 total aligned reads displayed.

GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013

ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         >  1:6857636/1‑93 (MQ=255)

ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         >  2:7286040/1‑93 (MQ=255)

ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         >  2:7540521/1‑93 (MQ=255)

   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      >  2:4110159/1‑93 (MQ=255)

    agatagatTTTTGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTa                                                                                     >  2:4642911/1‑93 (MQ=255)

    agatagatTTTCGCCAACAAGACGTTAATCATCGGCCAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTa                                                                                     >  2:6029584/1‑93 (MQ=255)

     gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa                                                                                    >  2:7834056/1‑93 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGATAAt                                                                                   >  2:3851819/1‑93 (MQ=255)

       tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc                                                                                  <  2:2691570/93‑1 (MQ=255)

       tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc                                                                                  >  1:307011/1‑93 (MQ=255)

        agatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCg                                                                                 >  1:813986/1‑93 (MQ=255)

         gatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGa                                                                                <  2:9575843/93‑1 (MQ=255)

          atTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGAc                                                                               <  1:1975623/93‑1 (MQ=255)

           ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt                                                                              >  1:9961247/1‑93 (MQ=255)

            tttCGCAAACAAGACGTTAATCATCGTCAAAAAGAGAAAACCCAGCAGCGAATACCGGCCGACCATAAATCCGACGTGTGGGTTAATCGACtt                                                                             <  2:4539145/93‑1 (MQ=255)

              tCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACtttt                                                                           <  2:9416092/93‑1 (MQ=255)

                gCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTgc                                                                         <  1:6634686/93‑1 (MQ=255)

                 ccAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTgcg                                                                        >  2:8361948/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  1:7162470/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  1:1698924/1‑93 (MQ=255)

                   aaaaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  1:2021725/4‑93 (MQ=255)

                    acaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGATAATCGACTTTTGCGCGt                                                                     >  1:8293645/1‑93 (MQ=255)

                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    >  1:1370700/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  2:2908126/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  2:1876938/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   <  1:9088135/93‑1 (MQ=255)

                        gACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAgga                                                                 >  2:8119499/1‑92 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              >  2:906577/1‑93 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              <  1:4278219/93‑1 (MQ=255)

                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             >  1:5328200/1‑93 (MQ=255)

                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             <  2:6590174/93‑1 (MQ=255)

                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             <  2:2397589/93‑1 (MQ=255)

                             tAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAgg                                                            <  1:6071699/93‑1 (MQ=255)

                              aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCCGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc                                                           >  1:3005859/1‑93 (MQ=255)

                               atcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGcc                                                          >  2:5968048/1‑93 (MQ=255)

                                tcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCg                                                         >  2:9286278/1‑93 (MQ=255)

                                tcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCg                                                         >  1:9609543/1‑93 (MQ=255)

                                 catcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGa                                                        >  1:9277029/1‑93 (MQ=255)

                                   tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc                                                      <  1:6319818/93‑1 (MQ=255)

                                   tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc                                                      >  1:5872751/1‑93 (MQ=255)

                                   tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc                                                      <  1:3128165/93‑1 (MQ=255)

                                   tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc                                                      >  1:9261923/1‑93 (MQ=255)

                                    cGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAcc                                                     >  1:373973/1‑93 (MQ=255)

                                    cGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAcc                                                     <  2:8580328/93‑1 (MQ=255)

                                     ggCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCg                                                    >  2:7382903/1‑93 (MQ=255)

                                         aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt                                                >  1:696150/1‑93 (MQ=255)

                                         aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt                                                >  1:4419972/1‑93 (MQ=255)

                                         aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt                                                >  1:10012148/1‑93 (MQ=255)

                                           aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc                                              >  1:3339722/1‑93 (MQ=255)

                                           aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc                                              >  2:1327437/1‑93 (MQ=255)

                                           aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc                                              <  1:2735191/93‑1 (MQ=255)

                                            agagATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCg                                             <  1:8982940/93‑1 (MQ=255)

                                              agaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTGTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGa                                           >  1:6213827/1‑93 (MQ=255)

                                               gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa                                          >  2:9315760/1‑93 (MQ=255)

                                               gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa                                          >  1:1481586/1‑93 (MQ=255)

                                               gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa                                          <  2:7951926/93‑1 (MQ=255)

                                                aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa                                         <  2:3534382/93‑1 (MQ=255)

                                                aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa                                         >  2:259466/1‑93 (MQ=255)

                                                aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa                                         <  1:4534462/93‑1 (MQ=255)

                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        >  1:6519900/1‑93 (MQ=255)

                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        <  2:3731212/93‑1 (MQ=255)

                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        >  1:2108597/1‑93 (MQ=255)

                                                  aaTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACt                                       >  2:8163936/1‑93 (MQ=255)

                                                   agccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCGCCGGAAACTg                                      <  2:414739/91‑1 (MQ=255)

                                                    tCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGCACCCGCCTCCGGAAACtcg                                     >  2:3962687/1‑91 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc                                    <  2:1603249/93‑1 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc                                    <  2:8585182/93‑1 (MQ=255)

                                                         cagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGTCCGAACCGGCCTCCGGAAACTGGCGAAc                                >  2:3012593/1‑93 (MQ=255)

                                                         cagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAAc                                >  2:7095000/1‑93 (MQ=255)

                                                         cagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAAc                                >  1:6149970/1‑93 (MQ=255)

                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  2:9791518/1‑93 (MQ=255)

                                                           acGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              <  1:5115431/92‑1 (MQ=255)

                                                             gATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGt                            >  1:7317794/1‑93 (MQ=255)

                                                             gATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGt                            <  1:8359900/93‑1 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           <  1:2382996/93‑1 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           <  1:8653587/93‑1 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           <  1:7103813/93‑1 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           >  1:975320/1‑93 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           >  2:178729/1‑93 (MQ=255)

                                                              aTGACCAGCCGACCATAAACCGGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           <  2:5644727/93‑1 (MQ=255)

                                                               tGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGttt                          <  1:3593962/93‑1 (MQ=255)

                                                               tGACCAGACGACCATAAATCCGACGTATGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGttt                          <  2:3984114/93‑1 (MQ=255)

                                                                 aCCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGc                        <  2:3455357/93‑1 (MQ=255)

                                                                    aGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGt                     <  2:5522768/93‑1 (MQ=255)

                                                                    aGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGt                     <  2:525232/93‑1 (MQ=255)

                                                                       cGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGc                  >  2:8677962/1‑93 (MQ=255)

                                                                        gACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCt                 >  2:5589070/1‑93 (MQ=255)

                                                                         aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg                >  1:4636347/1‑93 (MQ=255)

                                                                         aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg                >  1:790920/1‑93 (MQ=255)

                                                                          ccATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGa               <  2:5183945/93‑1 (MQ=255)

                                                                           cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              <  2:23027/93‑1 (MQ=255)

                                                                            aTAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATa             <  1:9342778/93‑1 (MQ=255)

                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            >  2:8300677/1‑93 (MQ=255)

                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            >  1:5682959/1‑93 (MQ=255)

                                                                               aaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCg          >  2:3277980/1‑93 (MQ=255)

                                                                                aTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCgg         >  2:144621/1‑93 (MQ=255)

                                                                                aTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCgg         >  2:4039102/1‑93 (MQ=255)

                                                                                 tCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGt        >  2:6233984/1‑93 (MQ=255)

                                                                                   cGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTaa      >  1:3469565/1‑93 (MQ=255)

                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   >  1:753339/1‑93 (MQ=255)

GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`