Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,359,603 G→A A150T (GCA→ACA)  ycjL → putative amidotransferase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,359,6030GA99.1% 768.6 / ‑4.2 220A150T (GCA→ACA) ycjLputative amidotransferase subunit
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base A (96/122);  total (96/124)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01

Only 100 of 240 total aligned reads displayed.

ACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT  >  NC_000913/1359513‑1359692
                                                                                          |                                                                                          
   ggtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCg                                                                                       >  2:2111381/1‑93 (MQ=255)
    gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt                                                                                      <  1:7303077/93‑1 (MQ=255)
    gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt                                                                                      >  2:1492856/1‑93 (MQ=255)
    gtggtTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGt                                                                                      <  2:3406647/93‑1 (MQ=255)
        ttCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCa                                                                                  <  1:852252/93‑1 (MQ=255)
        ttCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCa                                                                                  >  1:9331585/1‑93 (MQ=255)
        ttCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCATCGCa                                                                                  <  1:5644897/93‑1 (MQ=255)
            ttGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGaa                                                                              <  2:3670667/93‑1 (MQ=255)
             tGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGCCGCATGAAg                                                                             >  1:2809011/1‑93 (MQ=255)
                aTCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTc                                                                          <  1:4428189/93‑1 (MQ=255)
                aTCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGCGGAACAGCAATATACACCGTCGCATGAAGTTc                                                                          >  1:9366539/1‑93 (MQ=255)
                 tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATGCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa                                                                         >  2:7430715/1‑93 (MQ=255)
                 tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa                                                                         <  1:1176367/93‑1 (MQ=255)
                 tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa                                                                         <  1:5952848/93‑1 (MQ=255)
                 tCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCa                                                                         >  1:232600/1‑93 (MQ=255)
                  cGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAg                                                                        >  2:4855260/1‑93 (MQ=255)
                   gCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAgg                                                                       <  1:518355/93‑1 (MQ=255)
                    cAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGt                                                                      <  2:9016688/93‑1 (MQ=255)
                    cAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGt                                                                      >  2:6672718/1‑93 (MQ=255)
                     aaGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGtt                                                                     <  2:787876/93‑1 (MQ=255)
                     aaGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGtt                                                                     <  1:1513574/93‑1 (MQ=255)
                      aGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTg                                                                    >  1:6553013/1‑93 (MQ=255)
                       gCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGa                                                                   <  2:1353684/93‑1 (MQ=255)
                        cTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGaa                                                                  <  1:1528591/93‑1 (MQ=255)
                         tgtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAag                                                                 <  2:2442947/93‑1 (MQ=255)
                         tgtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAag                                                                 <  2:1995361/93‑1 (MQ=255)
                          gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga                                                                <  2:3067408/93‑1 (MQ=255)
                          gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga                                                                <  1:4127581/93‑1 (MQ=255)
                          gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga                                                                <  2:1452919/93‑1 (MQ=255)
                          gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga                                                                <  1:6478462/93‑1 (MQ=255)
                          gtgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAaga                                                                <  2:7034732/93‑1 (MQ=255)
                           tgCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAagag                                                              >  1:3371601/1‑93 (MQ=255)
                            gCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAgg                                                             >  2:7712061/1‑93 (MQ=255)
                            gCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAgg                                                             <  2:4604068/93‑1 (MQ=255)
                             cGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAggg                                                            <  2:1762604/93‑1 (MQ=255)
                               aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAggggg                                                          <  2:9565941/93‑1 (MQ=255)
                               aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAggggg                                                          >  2:8181009/1‑93 (MQ=255)
                               aaCAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAggggg                                                          >  1:3016577/1‑93 (MQ=255)
                                   gCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGAtt                                                      >  1:1871256/1‑93 (MQ=255)
                                   gCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGAtt                                                      >  1:2456499/1‑93 (MQ=255)
                                    ccTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTa                                                     >  2:9357842/1‑93 (MQ=255)
                                     cTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTAc                                                    >  2:3437746/1‑93 (MQ=255)
                                      tGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACt                                                   >  1:9492698/1‑93 (MQ=255)
                                      tGAATTGCGGGAACATCGGGAAGAGCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACt                                                   <  1:3892716/93‑1 (MQ=255)
                                       gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg                                                  <  2:2311991/93‑1 (MQ=255)
                                       gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg                                                  <  1:6053844/93‑1 (MQ=255)
                                       gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg                                                  >  2:4354328/1‑93 (MQ=255)
                                       gAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTg                                                  >  1:6966841/1‑93 (MQ=255)
                                         aTTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTc                                                <  2:1117083/93‑1 (MQ=255)
                                         aTTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTc                                                <  2:2991084/93‑1 (MQ=255)
                                           tGCTGGAACATCGGGAAGATCCAACACTACCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTg                                              <  1:8982374/93‑1 (MQ=255)
                                            gCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGCCTgg                                             >  1:2409383/1‑92 (MQ=255)
                                              tGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgt                                           <  1:7994820/93‑1 (MQ=255)
                                              tGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgt                                           >  2:2599216/1‑93 (MQ=255)
                                               ggAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgtt                                          >  2:7500946/1‑93 (MQ=255)
                                               ggAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgtt                                          <  2:3773644/93‑1 (MQ=255)
                                               ggAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCgtt                                          <  1:10006497/93‑1 (MQ=255)
                                                   cATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTa                                      <  2:4398781/93‑1 (MQ=255)
                                                    aTCGGAAAGATCCCGAAATGCCGGTGGAACGGCAATATACACCGTCGCATGAAATTGAGGTTGAGGAGGGGGGATTATTGTCTGCGTTGTTAc                                     <  2:2734905/93‑1 (MQ=255)
                                                     tCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTAcc                                    <  2:2643710/93‑1 (MQ=255)
                                                       gggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGGTTACTGTCTGCGTTGTTACCTg                                  >  1:5545173/1‑93 (MQ=255)
                                                       gggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTg                                  <  1:7313711/93‑1 (MQ=255)
                                                        ggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGa                                 >  1:1040414/1‑93 (MQ=255)
                                                        ggAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGa                                 <  2:5386924/93‑1 (MQ=255)
                                                         gAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGaa                                <  1:5337248/93‑1 (MQ=255)
                                                         gAAGATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGaa                                <  1:6916406/93‑1 (MQ=255)
                                                            gATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGt                             >  1:5029862/1‑93 (MQ=255)
                                                            gATCCCGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGt                             >  1:4043354/1‑93 (MQ=255)
                                                               cccGTACTGCCGGTGGAGCACCAATATACACCGTCGCAGGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTTCCTGAATGGAGc                          <  2:5138364/93‑1 (MQ=255)
                                                               cccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGc                          <  2:721817/93‑1 (MQ=255)
                                                               cccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGc                          >  1:4931118/1‑93 (MQ=255)
                                                                ccGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCa                         >  1:3494437/1‑93 (MQ=255)
                                                                 cGAACTGCCGGTGGAACAGCAATNTACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCaa                        <  1:5314274/93‑1 (MQ=255)
                                                                 cGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCaa                        >  1:7412925/1‑93 (MQ=255)
                                                                 cGAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCaa                        >  2:5921614/1‑93 (MQ=255)
                                                                  gAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAc                       <  2:4411281/93‑1 (MQ=255)
                                                                  gAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAc                       >  2:5243978/1‑93 (MQ=255)
                                                                  gAACTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAAc                       <  1:2853080/93‑1 (MQ=255)
                                                                    aCTGCCGGTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACtt                     <  1:8102902/93‑1 (MQ=255)
                                                                          ggTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTGCCTGAATGTAGCAACTTTTGGGt               <  2:9404247/93‑1 (MQ=255)
                                                                          ggTGGAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGt               >  1:5716275/1‑93 (MQ=255)
                                                                             ggAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTaaa            >  1:4627471/1‑93 (MQ=255)
                                                                              gAACAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAAc           <  2:8380307/93‑1 (MQ=255)
                                                                               aaCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAAct          >  2:6057313/1‑93 (MQ=255)
                                                                                aCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActc         >  1:8872069/1‑93 (MQ=255)
                                                                                aCAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActc         >  1:1821631/1‑93 (MQ=255)
                                                                                 cAGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActct        <  2:5466082/93‑1 (MQ=255)
                                                                                  aGCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctc       <  2:1931825/93‑1 (MQ=255)
                                                                                   gCAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAActctct      <  2:8826152/93‑1 (MQ=255)
                                                                                    cAATATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTa     <  2:4130441/93‑1 (MQ=255)
                                                                                     aaTATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGGTTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAc    <  1:9847557/93‑1 (MQ=255)
                                                                                     aaTATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAc    >  2:5630344/1‑93 (MQ=255)
                                                                                     aaTATACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTAc    <  1:8673259/93‑1 (MQ=255)
                                                                                      atatACACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTGCCTGAATGTAGCAACTTTTGGGTAAACTCTCTACa   <  2:2569780/93‑1 (MQ=255)
                                                                                       tataCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACa   <  1:8429581/93‑1 (MQ=255)
                                                                                       tataCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt  <  2:4991472/93‑1 (MQ=255)
                                                                                       tataCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt  >  2:7861806/1‑93 (MQ=255)
                                                                                       tataCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt  >  2:4751232/1‑93 (MQ=255)
                                                                                       tataCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAt  >  1:682108/1‑93 (MQ=255)
                                                                                       tataCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGCGTAAACTCTCTACAt  <  2:4801445/93‑1 (MQ=255)
                                                                                          |                                                                                          
ACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACAT  >  NC_000913/1359513‑1359692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: