BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,385,769	T→C	N342N (AAT→AAC)	tyrR →	TyrR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,385,769	0	T	C	99.6%	847.4 / ‑5.6	265	N342N (AAT→AAC)	tyrR	TyrR
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (117/146); total (118/147)
Fisher's exact test for biased strand distribution p-value = 4.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 269 total aligned reads displayed.

GCGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAATCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGA  >  NC_000913/1385679‑1385858

 ggTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTg                                                                                        <  2:7437119/92‑1 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      <  1:1353224/93‑1 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      <  1:8580520/93‑1 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      >  2:1226732/1‑93 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      >  2:165213/1‑93 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      >  2:6975989/1‑93 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      <  2:6451810/93‑1 (MQ=255)

     tCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCg                                                                                    >  2:492160/1‑93 (MQ=255)

      ccTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGa                                                                                   <  1:10043793/93‑1 (MQ=255)

      ccTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGa                                                                                   >  1:5558450/1‑93 (MQ=255)

        ttAATGATGGCGCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAAc                                                                                 >  1:7213052/1‑93 (MQ=255)

        ttAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAAc                                                                                 <  2:3836662/93‑1 (MQ=255)

         tAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACt                                                                                >  2:4584743/1‑93 (MQ=255)

         tAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACt                                                                                >  2:8307059/1‑93 (MQ=255)

          aaTGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTg                                                                               >  2:9566238/1‑93 (MQ=255)

            tgatgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGGGATTTGCGCTCCGCAGAAGAACCTGGTCGAACTggg                                                                             >  2:2908865/1‑92 (MQ=255)

              atgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGc                                                                           <  1:3037378/93‑1 (MQ=255)

              atgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGGGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGc                                                                           >  1:2696732/1‑93 (MQ=255)

               tgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCa                                                                          >  2:9904394/1‑93 (MQ=255)

               tgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCa                                                                          >  1:1083255/1‑93 (MQ=255)

                ggCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaa                                                                         >  2:5443659/1‑93 (MQ=255)

                  cACTTTCCGTCGGGTTAGCGAAGACCATGAGGTGCATGTCGATGTGCGGGGGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaa                                                                       >  2:5802892/1‑93 (MQ=255)

                   aCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGCACTGGTGCaaaaa                                                                      >  1:3378091/1‑93 (MQ=255)

                   aCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaaa                                                                      >  1:9340565/1‑93 (MQ=255)

                   aCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaaa                                                                      <  2:3633666/93‑1 (MQ=255)

                   aCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaaa                                                                      <  1:5497382/93‑1 (MQ=255)

                     tttCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAgg                                                                    >  2:201666/1‑93 (MQ=255)

                     tttCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGCCGAACTGGGGCAAAAAgg                                                                    >  2:8005922/1‑93 (MQ=255)

                      ttCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGc                                                                   <  1:5879850/93‑1 (MQ=255)

                       tCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCa                                                                  <  1:7969132/93‑1 (MQ=255)

                       tCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCa                                                                  <  1:4520352/93‑1 (MQ=255)

                       tCCGTCGGGTTGGCGAAGACCATGAGGGGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCa                                                                  >  1:7103414/1‑93 (MQ=255)

                        ccGTCGGGTTGTCGCAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGACCCTGGTCGAACTGGTGCAAAAAGGCAt                                                                 <  1:8930715/93‑1 (MQ=255)

                          gTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGt                                                               >  2:4544386/1‑93 (MQ=255)

                          gTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGt                                                               <  2:849957/93‑1 (MQ=255)

                            cGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTc                                                             <  1:6097441/93‑1 (MQ=255)

                            cGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTc                                                             <  2:6059809/93‑1 (MQ=255)

                            cGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTc                                                             <  2:8680275/93‑1 (MQ=255)

                              ggTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCg                                                           <  1:3344755/93‑1 (MQ=255)

                              ggTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCg                                                           >  1:8469359/1‑93 (MQ=255)

                              ggTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCg                                                           >  2:2529813/1‑93 (MQ=255)

                               gTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCgg                                                          >  1:6830990/1‑92 (MQ=255)

                                ttGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTg                                                         >  2:681040/1‑93 (MQ=255)

                                   gCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAg                                                      <  2:9446658/93‑1 (MQ=255)

                                   gCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAg                                                      <  1:9643953/93‑1 (MQ=255)

                                     gAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGAt                                                    >  2:3591068/1‑93 (MQ=255)

                                         aCCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATctct                                                <  1:732915/93‑1 (MQ=255)

                                            aTGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatt                                             <  1:1525489/93‑1 (MQ=255)

                                            aTGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatt                                             <  2:5725747/93‑1 (MQ=255)

                                            aTGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGAAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatt                                             >  2:7759894/1‑93 (MQ=255)

                                             tGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatta                                            <  2:3993299/93‑1 (MQ=255)

                                             tGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatta                                            >  1:2090294/1‑93 (MQ=255)

                                             tGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatta                                            >  2:7079804/1‑93 (MQ=255)

                                             tGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatta                                            <  2:1390809/93‑1 (MQ=255)

                                             tGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatta                                            >  2:1267561/1‑93 (MQ=255)

                                              gAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtattat                                           <  1:4969214/93‑1 (MQ=255)

                                               tggTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGCACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATc                                          >  1:3144580/2‑93 (MQ=255)

                                                  tGCATGTCGATGTGCGGGTGCTTTGCGCTACGCAGAAGAATCTGGTCGCACTGGTGCAAAAAGGCATGTTCCGTGAAGGTCTCTATTATCGtt                                       >  1:3892393/1‑92 (MQ=255)

                                                  tGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTc                                       <  2:3047294/93‑1 (MQ=255)

                                                  tGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTc                                       <  2:2258225/93‑1 (MQ=255)

                                                   gCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCt                                      <  1:291167/93‑1 (MQ=255)

                                                   gCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCt                                      <  1:1863883/93‑1 (MQ=255)

                                                   gCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCt                                      >  1:5191626/1‑93 (MQ=255)

                                                    cATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTg                                     <  1:1410822/93‑1 (MQ=255)

                                                      tGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGaa                                   <  2:3347142/93‑1 (MQ=255)

                                                      tGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGaa                                   <  2:6501038/93‑1 (MQ=255)

                                                      tGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGaa                                   <  2:9182626/93‑1 (MQ=255)

                                                      tGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGaa                                   <  2:975861/93‑1 (MQ=255)

                                                        tCGATGTGCGGGCGATTTGCGCTACGCAGCAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGACCg                                 >  1:4069305/1‑93 (MQ=255)

                                                          gATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACgtg                               <  1:228815/93‑1 (MQ=255)

                                                            tgtgCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGtt                             >  1:7584724/1‑93 (MQ=255)

                                                            tgtgCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACGGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGtt                             <  2:2369970/93‑1 (MQ=255)

                                                             gtgCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTg                            <  2:5598127/93‑1 (MQ=255)

                                                              tgCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGa                           <  1:6596338/93‑1 (MQ=255)

                                                              tgCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGa                           <  1:3049512/93‑1 (MQ=255)

                                                                cGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACg                         <  2:3869996/93‑1 (MQ=255)

                                                                   gTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTc                      >  2:5130347/1‑93 (MQ=255)

                                                                   gTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTc                      <  2:5278326/93‑1 (MQ=255)

                                                                     gATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCaa                    >  1:5481203/1‑93 (MQ=255)

                                                                     gATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCaa                    >  1:3663790/1‑93 (MQ=255)

                                                                       tttGTGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATc                  <  2:1069763/93‑1 (MQ=255)

                                                                       tttGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATc                  <  2:8386234/93‑1 (MQ=255)

                                                                         tGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTg                >  2:5891654/1‑93 (MQ=255)

                                                                         tGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGGCTGAACGTGTTGACGCTCAATCTg                >  2:2167708/1‑93 (MQ=255)

                                                                          gcgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgc               <  1:8673353/93‑1 (MQ=255)

                                                                          gcgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgc               <  1:7019577/93‑1 (MQ=255)

                                                                           cgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgcc              <  1:1588722/93‑1 (MQ=255)

                                                                           cgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgcc              <  1:2614698/93‑1 (MQ=255)

                                                                           cgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgcc              <  2:7558482/93‑1 (MQ=255)

                                                                           cgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgcc              >  1:3832489/1‑93 (MQ=255)

                                                                            gcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgccg             >  1:5788682/1‑93 (MQ=255)

                                                                            gcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgccg             <  2:3697662/93‑1 (MQ=255)

                                                                                cGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCcgccgc         <  1:492160/93‑1 (MQ=255)

                                                                                 gCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCt        >  1:6375095/1‑93 (MQ=255)

                                                                                  cAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTa       <  1:5405896/93‑1 (MQ=255)

                                                                                    gaagaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACg     >  1:9773908/1‑93 (MQ=255)

                                                                                    gaagaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACg     <  1:6253043/93‑1 (MQ=255)

                                                                                     aagaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGt    <  2:1847680/93‑1 (MQ=255)

                                                                                      agaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGCTGACGCTCAATCTGCCGCCGCTACGTg   >  2:8879205/1‑93 (MQ=255)

                                                                                       gaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGa  <  1:769855/93‑1 (MQ=255)

GCGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAATCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGA  >  NC_000913/1385679‑1385858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`