BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,458,752	T→C	R86R (CGT→CGC)	b1396 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,458,752	0	T	C	100.0%	924.6 / NA	290	R86R (CGT→CGC)	b1396	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (162/128); total (162/128)

Only 100 of 300 total aligned reads displayed.

ATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA  >  NC_000913/1458662‑1458841

aTTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGCCAGCCGTCGCGTCCGTCTGCACGATTGATTTTTTGCGccc                                                                                         >  1:6909559/1‑93 (MQ=255)

 ttttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCa                                                                                        <  2:9097016/93‑1 (MQ=255)

 ttttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCa                                                                                        <  2:1753708/93‑1 (MQ=255)

 ttttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGATGGCCGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGcccg                                                                                        >  1:2694884/1‑92 (MQ=255)

   ttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGTCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAgg                                                                                      <  1:4495010/93‑1 (MQ=255)

    tCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGc                                                                                     >  2:5455472/1‑93 (MQ=255)

      aCTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCtt                                                                                   <  2:295893/93‑1 (MQ=255)

      aCTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCtt                                                                                   <  1:5252028/93‑1 (MQ=255)

          gCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGACTGCACGATTGATTTTTTGCGCCCAGGCTTTGcc                                                                               <  2:3639155/93‑1 (MQ=255)

           gtGATTCTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGGCGGCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCg                                                                              <  1:8903896/92‑1 (MQ=255)

           cTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCg                                                                              >  1:583319/1‑93 (MQ=255)

            tGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCgg                                                                             >  1:6821009/1‑93 (MQ=255)

              aTACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGgag                                                                           >  2:6100165/1‑93 (MQ=255)

               tACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGgaga                                                                          >  1:10002685/1‑93 (MQ=255)

               tACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGgaga                                                                          <  2:2307013/93‑1 (MQ=255)

                  tGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGacac                                                                       >  2:3339510/1‑93 (MQ=255)

                    ccTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCt                                                                     >  1:2884888/1‑93 (MQ=255)

                     cTTTGCCTACGCCTTCATTAGCCAGGGGCTGGCAGCCTCCGCTTCTGCCTGCACGATTGATTTTTTGCCCCAAGGCTTTGCCGGGGACACCta                                                                    >  2:6890420/1‑92 (MQ=255)

                     cTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCtt                                                                    <  2:8459114/93‑1 (MQ=255)

                       ttGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTaa                                                                  <  1:5535830/93‑1 (MQ=255)

                         gCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACt                                                                >  2:653678/1‑93 (MQ=255)

                          ccTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTg                                                               <  1:2509375/93‑1 (MQ=255)

                           cTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGc                                                              >  2:7768123/1‑93 (MQ=255)

                             aCGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGcca                                                            <  1:4426149/93‑3 (MQ=255)

                              cGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAc                                                           <  2:8135220/93‑1 (MQ=255)

                               gCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACt                                                          >  2:401267/1‑93 (MQ=255)

                                 cTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTgc                                                        >  1:304019/1‑93 (MQ=255)

                                  tGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTgcg                                                       >  1:4782203/1‑93 (MQ=255)

                                  tGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgcg                                                       <  1:7448022/93‑1 (MQ=255)

                                   gCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgcgc                                                      >  2:7250021/1‑93 (MQ=255)

                                    cAATCGCCAGAGCCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCa                                                     <  2:1088173/93‑1 (MQ=255)

                                       tAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGt                                                  >  1:9950379/1‑93 (MQ=255)

                                         gCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTAc                                                >  2:2440920/1‑93 (MQ=255)

                                           cAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGt                                              >  1:3826690/1‑93 (MQ=255)

                                            aGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtc                                             >  2:4212566/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            >  2:4391312/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            >  2:7395423/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            >  1:1482516/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            <  1:9413198/93‑1 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtca                                            <  2:5933573/93‑1 (MQ=255)

                                               ggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatc                                          <  1:2342668/93‑1 (MQ=255)

                                               ggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatc                                          <  2:9725277/93‑1 (MQ=255)

                                               ggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatc                                          <  2:5005493/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtcatca                                         <  1:40532/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtcatca                                         <  1:1704170/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtcatca                                         <  2:4784295/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatca                                         <  2:6191495/93‑1 (MQ=255)

                                                     cAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgca                                    >  2:199566/1‑93 (MQ=255)

                                                       gCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaag                                  >  1:4085246/1‑93 (MQ=255)

                                                        ccGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagc                                 <  1:1871996/93‑1 (MQ=255)

                                                        ccGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagc                                 >  2:7821172/1‑93 (MQ=255)

                                                         cGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGgcaagca                                >  2:8319996/1‑93 (MQ=255)

                                                         cGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagca                                >  1:7253031/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGCTTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGCgcaagcaa                               >  1:2807348/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGATTTTTTGCTCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagcaa                               >  1:7720600/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagcaa                               >  1:8208461/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagcaa                               >  2:4525125/1‑93 (MQ=255)

                                                            cgtttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAAc                             <  1:7122999/90‑1 (MQ=255)

                                                            cGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAAc                             <  1:2108133/93‑1 (MQ=255)

                                                             gCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAAcc                            >  2:2852296/1‑93 (MQ=255)

                                                             gCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAAcc                            <  2:1221624/93‑1 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          <  1:1684333/93‑1 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          >  2:6809807/1‑93 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          >  2:3821583/1‑93 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          <  1:9070470/93‑1 (MQ=255)

                                                                tCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgt                         >  2:2873947/1‑93 (MQ=255)

                                                                tCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgt                         >  1:4823363/1‑93 (MQ=255)

                                                                  tgcctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgtgt                       >  1:8559206/1‑93 (MQ=255)

                                                                   gcctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGtt                      <  2:310733/93‑1 (MQ=255)

                                                                    cctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGttt                     >  1:1178220/1‑93 (MQ=255)

                                                                    cctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGttt                     >  1:9657500/1‑93 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    <  1:5378567/93‑1 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    >  1:8574714/1‑93 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    >  2:7143497/1‑93 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    <  2:6260403/93‑1 (MQ=255)

                                                                      tgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAc                   >  2:3500837/1‑93 (MQ=255)

                                                                      tgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAc                   >  1:3409651/1‑93 (MQ=255)

                                                                        cACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGa                 <  1:345873/93‑1 (MQ=255)

                                                                         aCGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAc                >  1:6381273/1‑93 (MQ=255)

                                                                          cGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACa               >  2:9480932/1‑93 (MQ=255)

                                                                          cGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACa               <  2:1908300/93‑1 (MQ=255)

                                                                           gattgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAt              >  1:1323680/1‑93 (MQ=255)

                                                                           gattgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACAGGTGTTTACGACAt              >  2:9933525/1‑93 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             >  2:3750912/1‑93 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             <  2:601001/93‑1 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             <  2:7674630/93‑1 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             <  2:5227880/93‑1 (MQ=255)

                                                                             ttgtttTTTGGCGCCGAGGTTTTGCCGGAGACCCGTTACCTGCCGGTGCGCGGGTGGGTGATGGGGGGAGGGAGGGCGGTGTTTACGACATCg            <  2:9203173/93‑1 (MQ=255)

                                                                             ttgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCg            >  1:4601781/1‑93 (MQ=255)

                                                                              tgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGa           <  2:2245716/93‑1 (MQ=255)

                                                                              tgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGa           <  1:5964608/93‑1 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        >  1:3684885/1‑93 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        <  1:3232813/93‑1 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        >  1:8753812/1‑93 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        <  1:600129/93‑1 (MQ=255)

                                                                                  tttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAtt       >  1:1218412/1‑93 (MQ=255)

                                                                                   ttttGCGCCCAGGCTTTGCCGGAGACACCTTAGCTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTg      <  2:5737598/93‑1 (MQ=255)

                                                                                    tttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGt     <  2:6327146/93‑1 (MQ=255)

                                                                                      tGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTa   <  1:8186937/93‑1 (MQ=255)

                                                                                      tGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTa   <  1:8021388/93‑1 (MQ=255)

ATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA  >  NC_000913/1458662‑1458841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`