Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,476,839 T→C V197A (GTC→GCC)  b1409 → putative phosphatidate cytidiltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,476,8390TC99.1% 711.3 / NA 228V197A (GTC→GCC) b1409putative phosphatidate cytidiltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (127/99);  minor base G (2/0);  total (129/99)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 239 total aligned reads displayed.

CGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAC  >  NC_000913/1476749‑1476928
                                                                                          |                                                                                         
ggTTTCTGGTGTGATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACTGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGccc                                                                                         <  2:3353766/92‑1 (MQ=255)
 gTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGTCAGAAGAAAAGTGGcccc                                                                                        >  1:4092841/1‑93 (MQ=255)
  ttACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCt                                                                                       >  1:4485592/1‑93 (MQ=255)
  ttACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCt                                                                                       >  1:7652825/1‑93 (MQ=255)
  ttACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCt                                                                                       >  1:9973067/1‑93 (MQ=255)
   tACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTa                                                                                      <  2:538704/93‑1 (MQ=255)
     cTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTaaa                                                                                    <  2:6198527/93‑1 (MQ=255)
      tGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAg                                                                                   >  1:9330707/1‑93 (MQ=255)
       ggTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGt                                                                                  >  2:3296137/1‑93 (MQ=255)
         tgtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCa                                                                                <  2:4574935/93‑1 (MQ=255)
          gtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGACAAGTGGCCCCTAAAGTCAg                                                                               >  2:4030758/1‑93 (MQ=255)
          gtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAg                                                                               >  2:7835800/1‑93 (MQ=255)
          gtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAg                                                                               <  1:8442488/93‑1 (MQ=255)
           ttATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGc                                                                              >  2:497460/1‑93 (MQ=255)
            tATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGcc                                                                             <  1:2101917/93‑1 (MQ=255)
            tATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGcc                                                                             >  1:8897349/1‑93 (MQ=255)
            tATTTCTTTTGGCATCAACCGAGTCAAACGTTATTGCACAGTATTTATGGGAAAAATCCTGCAGCAGAAGAAAAGTGGCCCCTAAAGTCAGcc                                                                             <  2:9387417/93‑1 (MQ=255)
             aTTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGccc                                                                            >  2:2634599/1‑93 (MQ=255)
                 cTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGa                                                                        >  2:2802454/1‑93 (MQ=255)
                 cTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGa                                                                        >  2:8779637/1‑93 (MQ=255)
                  ttttGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCgggca                                                                       >  2:357782/1‑91 (MQ=255)
                  ttttGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaa                                                                       >  1:2980917/1‑93 (MQ=255)
                    ttGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaaaa                                                                     <  1:8113993/93‑1 (MQ=255)
                      ggCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAAc                                                                   <  1:7797499/93‑1 (MQ=255)
                       gCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACa                                                                  <  2:1314127/93‑1 (MQ=255)
                       gCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACa                                                                  <  1:8811411/93‑1 (MQ=255)
                       gCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACa                                                                  <  1:6997179/93‑1 (MQ=255)
                        cATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAt                                                                 >  2:3659494/1‑93 (MQ=255)
                        cATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAt                                                                 >  1:6927826/1‑93 (MQ=255)
                        cATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAt                                                                 <  2:692579/93‑1 (MQ=255)
                         aTTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAtt                                                                >  1:1684035/1‑93 (MQ=255)
                          ttAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTg                                                               >  1:2640332/1‑93 (MQ=255)
                          ttAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTg                                                               >  2:7633729/1‑93 (MQ=255)
                           tAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTgg                                                              >  1:9191664/1‑93 (MQ=255)
                           tAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTgg                                                              <  1:1597088/93‑1 (MQ=255)
                            aaCCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGa                                                             >  1:2351310/1‑93 (MQ=255)
                              ccGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAg                                                           >  2:592631/1‑93 (MQ=255)
                                gAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGt                                                         >  2:3773618/1‑93 (MQ=255)
                                 aGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTc                                                        >  1:6455731/1‑93 (MQ=255)
                                 aGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTc                                                        <  1:6289671/93‑1 (MQ=255)
                                 aGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTc                                                        >  2:5342872/1‑93 (MQ=255)
                                 aGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTc                                                        >  1:385259/1‑93 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGTAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  1:8359178/93‑1 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     >  2:155258/1‑93 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  2:9544858/93‑1 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  2:9518722/93‑1 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  1:8403982/93‑1 (MQ=255)
                                     aaaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGAt                                                    <  2:7162589/93‑1 (MQ=255)
                                      aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   <  1:4709120/93‑1 (MQ=255)
                                      aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   >  1:1321887/1‑93 (MQ=255)
                                      aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   >  2:1009216/1‑93 (MQ=255)
                                      aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   >  2:8448025/1‑93 (MQ=255)
                                        cGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATggg                                                 >  2:5093023/1‑93 (MQ=255)
                                        cGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATggg                                                 <  2:5116775/93‑1 (MQ=255)
                                         gATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggc                                                <  1:1292214/93‑1 (MQ=255)
                                          atatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcg                                               >  2:2766708/1‑93 (MQ=255)
                                          atatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcg                                               <  2:739891/93‑1 (MQ=255)
                                          atatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcg                                               >  2:4269680/1‑93 (MQ=255)
                                           tatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcgg                                              >  2:3096477/1‑93 (MQ=255)
                                           tatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcgg                                              >  2:5603949/1‑93 (MQ=255)
                                           tatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcgg                                              >  2:5250660/1‑93 (MQ=255)
                                               gCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtc                                          >  1:3429599/1‑93 (MQ=255)
                                                cacaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtca                                         >  1:2161188/1‑93 (MQ=255)
                                                cacaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtca                                         <  2:8392217/93‑1 (MQ=255)
                                                 acaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcat                                        <  2:585365/93‑1 (MQ=255)
                                                  caGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGGCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcatc                                       >  2:2645479/1‑93 (MQ=255)
                                                   aGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcatca                                      >  1:5580663/1‑93 (MQ=255)
                                                    gTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCAc                                     >  1:9918892/1‑93 (MQ=255)
                                                     tATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCAcc                                    >  1:7356447/1‑93 (MQ=255)
                                                        ttATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatc                                 >  1:5304184/1‑93 (MQ=255)
                                                        ttATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatc                                 >  2:6176232/1‑93 (MQ=255)
                                                         tATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatca                                >  2:7340211/1‑93 (MQ=255)
                                                          aTGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatcat                               >  1:8539281/1‑93 (MQ=255)
                                                          aTGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatcat                               <  2:2255852/93‑1 (MQ=255)
                                                           tGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATg                              >  2:9165033/1‑93 (MQ=255)
                                                           tGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATg                              <  2:8040421/93‑1 (MQ=255)
                                                             gggAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGAt                            <  1:1059443/93‑1 (MQ=255)
                                                             gggAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGAt                            >  2:8580214/1‑93 (MQ=255)
                                                                aaaaTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGc                         >  1:5701791/1‑93 (MQ=255)
                                                                   aTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTc                      >  1:5164992/1‑93 (MQ=255)
                                                                    tCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCa                     >  2:5453774/1‑93 (MQ=255)
                                                                      cTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACt                   <  1:6541191/93‑1 (MQ=255)
                                                                      cTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACt                   <  1:9385000/93‑1 (MQ=255)
                                                                         cGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGAt                <  2:8265867/93‑1 (MQ=255)
                                                                            cAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTAt             >  1:3228865/1‑93 (MQ=255)
                                                                            cAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTAt             <  1:8105588/93‑1 (MQ=255)
                                                                            cAGAAGAAAAGTGGCCCCTAAAATCAGCGCGGGAAAAGCATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTAt             <  1:46341/93‑1 (MQ=255)
                                                                            cAGAAGAAAAGTGCCCCCTAAAGTAAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACAATCATGATTGCGTCAAAGATTAt             <  2:3838501/93‑1 (MQ=255)
                                                                             agaagaAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATc            >  2:1988035/1‑93 (MQ=255)
                                                                             agaagaAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATc            <  2:4719842/93‑1 (MQ=255)
                                                                              gaagaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCg           >  1:2043837/1‑93 (MQ=255)
                                                                              gaagaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCg           <  2:3424770/93‑1 (MQ=255)
                                                                                 gaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAc        <  2:6672743/93‑1 (MQ=255)
                                                                                 gaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAc        >  1:549469/1‑93 (MQ=255)
                                                                                 gaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAc        >  1:926021/1‑93 (MQ=255)
                                                                                  aaaaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAcc       >  1:4347811/1‑93 (MQ=255)
                                                                                   aaaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCg      <  2:5765900/93‑1 (MQ=255)
                                                                                    aaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGt     <  1:4030759/93‑1 (MQ=255)
                                                                                    aaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGt     <  1:9109539/93‑1 (MQ=255)
                                                                                    aaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGt     >  1:1798479/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAC  >  NC_000913/1476749‑1476928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: