Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,535,627 A→G R417R (CGT→CGC narY ← cryptic nitrate reductase 2 beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,535,6270AG99.5% 630.6 / NA 195R417R (CGT→CGCnarYcryptic nitrate reductase 2 beta subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (100/94);  minor base T (0/1);  total (100/95)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 206 total aligned reads displayed.

GAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCAC  >  NC_000913/1535537‑1535719
                                                                                          |                                                                                            
gagaTAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCg                                                                                            >  2:809273/1‑93 (MQ=255)
  gaTAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCa                                                                                          <  2:5363119/93‑1 (MQ=255)
  gaTAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCa                                                                                          >  2:5046990/1‑93 (MQ=255)
    tAGCGATACATCTCTTCGCCCTGGGCGACGCTCAGGCCTACTTCGTCGAGGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCCCatt                                                                                        >  2:404908/1‑92 (MQ=255)
    tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                        <  2:8037111/93‑1 (MQ=255)
    tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                        <  2:1203947/93‑1 (MQ=255)
    tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                        <  1:843788/93‑1 (MQ=255)
    aaGCGATACCTCTCTTCGACCTGAGCGACGCTGAGGCCTACTGCGTCGATGACACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                        <  1:1476175/92‑1 (MQ=255)
     aGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCatat                                                                                       <  2:3505424/93‑1 (MQ=255)
     aGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCatat                                                                                       >  1:2436418/1‑93 (MQ=255)
      gCGATACATCTCTTCGACCTGTGCGACGCTCAGGCCTACTTCGTCGATGGCACGATTATCAGTAACGCCTTCCACGGTTTGTGAGCGCAtata                                                                                      <  2:3307126/93‑1 (MQ=255)
      gCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCAtata                                                                                      >  1:4616855/1‑93 (MQ=255)
       cGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAg                                                                                     >  1:5333502/1‑93 (MQ=255)
        gATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGt                                                                                    <  2:2430648/93‑1 (MQ=255)
         aTACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCTACGGTTTGGGAGCGCATATAGTg                                                                                   >  2:5506708/1‑93 (MQ=255)
         aTACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCGACGGTTTGTGAGCGCATATAGTg                                                                                   >  2:5526697/1‑93 (MQ=255)
         aTACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTg                                                                                   >  1:8281664/1‑93 (MQ=255)
          tACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTgg                                                                                  >  1:6152995/1‑93 (MQ=255)
           aCATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGgc                                                                                 <  1:3677794/93‑1 (MQ=255)
             aTCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGgcgc                                                                               <  1:9227781/93‑1 (MQ=255)
             aTCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGgcgc                                                                               <  2:5076846/93‑1 (MQ=255)
                 ctTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCg                                                                           >  1:4721032/1‑93 (MQ=255)
                  ttCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGc                                                                          <  2:521863/93‑1 (MQ=255)
                   tCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGcc                                                                         <  2:1509615/93‑1 (MQ=255)
                   tCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGcc                                                                         >  1:5995616/1‑93 (MQ=255)
                     gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat                                                                       >  2:6058809/1‑93 (MQ=255)
                     gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat                                                                       >  1:5025619/1‑93 (MQ=255)
                      aCCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatc                                                                      >  1:3138305/1‑93 (MQ=255)
                      aCCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatc                                                                      >  1:8864776/1‑93 (MQ=255)
                      aCCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatc                                                                      <  1:9492949/93‑1 (MQ=255)
                       ccTGGGCGACGCTCAGGCCTACTGCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatca                                                                     <  1:7121064/93‑1 (MQ=255)
                        cTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatcat                                                                    >  2:5819247/1‑93 (MQ=255)
                        cTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatcat                                                                    >  2:948836/1‑93 (MQ=255)
                        cTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatcat                                                                    >  2:1919538/1‑93 (MQ=255)
                         tGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCatcatc                                                                   >  1:6195422/1‑93 (MQ=255)
                          gggCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATcc                                                                  >  1:9564471/1‑93 (MQ=255)
                            gCGACGCTCAGGCCTACTTCGGCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGt                                                                <  1:2995272/93‑1 (MQ=255)
                             cGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGtt                                                               >  1:4504559/1‑93 (MQ=255)
                                 gCTCAGGCCTACTTCCTCGATGGCACGAGTATCAGTAACGCCTTCCACGGGTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAg                                                           <  1:4329555/93‑1 (MQ=255)
                                  cTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgc                                                          >  1:64900/1‑93 (MQ=255)
                                   tCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcg                                                         >  1:8852513/1‑93 (MQ=255)
                                   tCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcg                                                         >  2:9879065/1‑93 (MQ=255)
                                    cAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcgc                                                        >  2:2680228/1‑93 (MQ=255)
                                     aGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGcc                                                       >  2:822658/1‑93 (MQ=255)
                                         cTACTTCATCCATGGCACGAGTATCAGTAGCGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCa                                                   <  2:8551387/93‑1 (MQ=255)
                                          tACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAg                                                  <  2:6483847/93‑1 (MQ=255)
                                           aCTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGt                                                 >  1:4210702/1‑93 (MQ=255)
                                            cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCACCCGCAGTa                                                >  2:3891159/1‑93 (MQ=255)
                                            cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGCTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAgga                                                >  2:7749374/1‑91 (MQ=255)
                                              tcgtcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTacc                                              >  1:6855724/1‑93 (MQ=255)
                                                gtcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgg                                            <  1:868863/93‑1 (MQ=255)
                                                 tcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgga                                           >  2:5392368/1‑93 (MQ=255)
                                                  cgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggac                                          <  2:6730617/93‑1 (MQ=255)
                                                   gATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggacc                                         <  2:7455368/93‑1 (MQ=255)
                                                   gATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggacc                                         <  1:6679850/93‑1 (MQ=255)
                                                    aTGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggaccg                                        >  1:350616/1‑93 (MQ=255)
                                                     tGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggaccgg                                       <  2:2414903/93‑1 (MQ=255)
                                                       gCACGAGTATCAGGAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTa                                     <  2:6222187/93‑1 (MQ=255)
                                                         aCGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATc                                   >  1:1100533/1‑93 (MQ=255)
                                                          cGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCg                                  >  2:216021/1‑93 (MQ=255)
                                                          cGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCg                                  >  1:5662102/1‑93 (MQ=255)
                                                           gaatATCAGTAACGCCTTCCACGTTTTGTGAGCTCATATAGTGGCCCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc                                 <  2:3651372/90‑1 (MQ=255)
                                                           gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc                                 >  1:4806153/1‑93 (MQ=255)
                                                           gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc                                 <  1:5152940/93‑1 (MQ=255)
                                                            aGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGcc                                <  1:103322/93‑1 (MQ=255)
                                                            aGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGcc                                >  2:4637075/1‑93 (MQ=255)
                                                            aGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGcc                                <  2:1278541/93‑1 (MQ=255)
                                                              tATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCgg                              <  1:1541761/93‑1 (MQ=255)
                                                                   gTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc                         >  2:31397/1‑93 (MQ=255)
                                                                   gTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc                         >  2:4143539/1‑93 (MQ=255)
                                                                    tAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCa                        >  1:4401644/1‑93 (MQ=255)
                                                                    tAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCa                        >  2:7046203/1‑93 (MQ=255)
                                                                     aaCGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCaa                       <  1:7749608/93‑1 (MQ=255)
                                                                     aaCGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCaa                       <  1:7436376/93‑1 (MQ=255)
                                                                      aCGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAAc                      <  1:7643670/93‑1 (MQ=255)
                                                                       cGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACa                     <  2:741652/93‑1 (MQ=255)
                                                                       cGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACa                     <  2:3564765/93‑1 (MQ=255)
                                                                       cGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACa                     <  2:374835/93‑1 (MQ=255)
                                                                         ccTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACata                   <  1:5527902/93‑1 (MQ=255)
                                                                         ccTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACata                   >  1:9839955/1‑93 (MQ=255)
                                                                          cTTCCCCGTGTTGTGAGCGCATTTAGTGGCCCATCTCCATCATCCGTTTCACCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACatat                  <  1:2065918/93‑1 (MQ=255)
                                                                          cTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACatat                  <  1:5251839/93‑1 (MQ=255)
                                                                          cTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACatat                  >  1:2534589/1‑93 (MQ=255)
                                                                           ttCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt                 >  2:7274970/1‑93 (MQ=255)
                                                                           ttCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt                 >  1:3043523/1‑93 (MQ=255)
                                                                            tCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTg                <  2:8910778/93‑1 (MQ=255)
                                                                            tCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTg                >  1:8404307/1‑93 (MQ=255)
                                                                            tCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTg                >  1:1847065/1‑93 (MQ=255)
                                                                                cGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCga            <  2:6952834/93‑1 (MQ=255)
                                                                                 ggTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCgag           >  1:6399079/1‑93 (MQ=255)
                                                                                  gTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCgaga          <  1:2777812/93‑1 (MQ=255)
                                                                                   tttGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGat         >  2:9813834/1‑93 (MQ=255)
                                                                                    ttGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGata        >  1:3611721/1‑93 (MQ=255)
                                                                                    ttGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGata        <  2:7970134/93‑1 (MQ=255)
                                                                                    tggtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGata        <  1:5686531/91‑1 (MQ=255)
                                                                                     tgtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGatat       <  2:3255480/93‑1 (MQ=255)
                                                                                     tgtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGatat       <  2:3829966/93‑1 (MQ=255)
                                                                                      gtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATAtt      >  2:144792/1‑93 (MQ=255)
                                                                                      gtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATAtt      <  1:8222643/93‑1 (MQ=255)
                                                                                      gtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATAtt      <  2:4721031/93‑1 (MQ=255)
                                                                                          |                                                                                            
GAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCAC  >  NC_000913/1535537‑1535719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: