Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,555,388 G→A G225G (GGC→GGT b1483 ← putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,555,3880GA91.0% 573.9 / 25.8 201G225G (GGC→GGTb1483putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base G (14/4);  new base A (86/97);  total (100/101)
Fisher's exact test for biased strand distribution p-value = 1.40e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.37e-01

Only 100 of 215 total aligned reads displayed.

TTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGT  >  NC_000913/1555298‑1555480
                                                                                          |                                                                                            
 tcctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGccc                                                                                           >  1:8783971/1‑93 (MQ=255)
  cctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGGATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGGCccccg                                                                                          >  1:5840708/1‑92 (MQ=255)
    tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGt                                                                                        <  2:4915331/93‑1 (MQ=255)
    tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGt                                                                                        >  2:2193544/1‑93 (MQ=255)
    tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCAACTGCTGCGCCTCACCCAGt                                                                                        >  2:2377462/1‑93 (MQ=255)
     ccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGtt                                                                                       >  1:2547646/1‑93 (MQ=255)
       aGCGGTTTATCAATGGCGGGGAGTGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCt                                                                                     <  1:6444565/93‑1 (MQ=255)
       aGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCt                                                                                     <  2:4966199/93‑1 (MQ=255)
        gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTa                                                                                    >  2:3428181/1‑93 (MQ=255)
        gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTa                                                                                    <  2:3205665/93‑1 (MQ=255)
        gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGGGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTa                                                                                    >  1:6951973/1‑93 (MQ=255)
         cGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTAc                                                                                   <  1:6261548/93‑1 (MQ=255)
          ggTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGGCCCGTTCTACa                                                                                  >  2:6032363/1‑93 (MQ=255)
           gTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACaa                                                                                 >  1:7453816/1‑93 (MQ=255)
            tttATCAATGGCGGGGAGGGAATCCAGCAATAATTGGGCGTATGGATGTGCAGGGGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAAt                                                                                >  1:7758986/1‑93 (MQ=255)
            tttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAAt                                                                                <  1:858806/93‑1 (MQ=255)
             ttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATc                                                                               >  2:9454682/1‑93 (MQ=255)
             ttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATc                                                                               >  1:9877844/1‑93 (MQ=255)
             ttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATc                                                                               <  1:3303017/93‑1 (MQ=255)
              tATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCt                                                                              >  1:967598/1‑93 (MQ=255)
              tATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCt                                                                              <  1:1616726/93‑1 (MQ=255)
               ctCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTg                                                                             <  1:5512220/92‑1 (MQ=255)
                tCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGGGCTGGCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGc                                                                            >  1:6489663/1‑93 (MQ=255)
                    tGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCga                                                                        <  2:7943456/93‑1 (MQ=255)
                     ggCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCgag                                                                       <  2:3584447/93‑1 (MQ=255)
                      gCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCgaga                                                                      <  2:1091797/93‑1 (MQ=255)
                      gCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCgaga                                                                      <  2:8582438/93‑1 (MQ=255)
                       gggggAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGAt                                                                     <  2:9772882/92‑1 (MQ=255)
                       cGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGAt                                                                     <  2:9326885/93‑1 (MQ=255)
                         gggagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATAc                                                                   <  1:3796646/93‑1 (MQ=255)
                          ggagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACa                                                                  <  1:5096416/93‑1 (MQ=255)
                           gagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCAACTGCTGCGCGGGACCCAGTTCTACAATCTGCCGGAGATACAt                                                                 >  2:4511183/1‑93 (MQ=255)
                            ggggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc                                                                <  1:5228488/92‑1 (MQ=255)
                            agggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc                                                                >  2:1208074/1‑93 (MQ=255)
                            agggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc                                                                <  2:7340893/93‑1 (MQ=255)
                            agggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc                                                                <  1:7829167/93‑1 (MQ=255)
                             gggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCa                                                               >  2:5347467/1‑93 (MQ=255)
                             gggaATCCAGCAATAAGCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCa                                                               <  2:1913654/93‑1 (MQ=255)
                              ggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCAc                                                              >  1:437545/1‑93 (MQ=255)
                                aaTCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCg                                                            >  2:5645598/1‑93 (MQ=255)
                                  tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGcc                                                          >  1:7091681/1‑93 (MQ=255)
                                  tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGcc                                                          >  2:5719498/1‑93 (MQ=255)
                                  tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTGCTACAATCTGCCCGAGATACATCACCGcc                                                          <  2:4873253/93‑1 (MQ=255)
                                  tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGcc                                                          >  2:7882250/1‑93 (MQ=255)
                                    cAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCAc                                                        >  2:4888854/1‑93 (MQ=255)
                                        aataatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGa                                                    <  1:7171053/93‑1 (MQ=255)
                                                ggTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCat                                            >  1:128453/1‑93 (MQ=255)
                                                 gtgtATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCata                                           <  2:9602761/93‑1 (MQ=255)
                                                  tttATGGATGGGCAGGTGCCGTCAGCACCTGCTGCGCTTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCatat                                          >  2:4160872/3‑93 (MQ=38)
                                                  tgtATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCatat                                          >  1:1184912/1‑93 (MQ=255)
                                                    tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCTCTCATATGa                                        <  1:7648964/93‑1 (MQ=255)
                                                    tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGa                                        >  2:4619531/1‑93 (MQ=255)
                                                    tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGa                                        >  2:6170053/1‑93 (MQ=255)
                                                      tGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACg                                      >  2:5386326/1‑93 (MQ=255)
                                                        gATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTa                                    <  1:6822743/93‑1 (MQ=255)
                                                        gATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTa                                    >  2:4193752/1‑93 (MQ=255)
                                                         aTGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAt                                   <  1:7329149/93‑1 (MQ=255)
                                                         aTGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAt                                   <  1:2047804/93‑1 (MQ=255)
                                                          tgtgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATc                                  >  2:8825242/1‑93 (MQ=255)
                                                           gtgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCa                                 >  1:610147/1‑93 (MQ=255)
                                                            tgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCTCCCGATCGCTCATATGACGTATCAc                                <  2:7768190/93‑1 (MQ=255)
                                                              cAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCg                              >  1:949281/1‑93 (MQ=255)
                                                              cAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCg                              >  1:4043104/1‑93 (MQ=255)
                                                               cggTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCga                             <  2:7234934/92‑1 (MQ=255)
                                                               aGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCga                             >  2:2494386/1‑93 (MQ=255)
                                                                ggTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCgag                            >  2:4047993/1‑93 (MQ=255)
                                                                ggTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCgag                            >  2:5105354/1‑93 (MQ=255)
                                                                 gTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCgaga                           >  2:3663809/1‑93 (MQ=255)
                                                                 gTGACGTCAGCGCCTGCTGCGCGTAACCCAGTTCTACAATCTGCCCGAGATACATCGCCGCCACCCGATCGCTCATATGACGTATCACCgagc                           <  1:2192481/93‑2 (MQ=255)
                                                                  tGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGAc                          <  2:2952687/93‑1 (MQ=255)
                                                                   gCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACa                         >  2:1321303/1‑93 (MQ=255)
                                                                   gCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACa                         <  2:2906726/93‑1 (MQ=255)
                                                                   gCCGTAAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACa                         >  2:7503062/1‑93 (MQ=255)
                                                                    ccGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAt                        <  2:270136/93‑1 (MQ=255)
                                                                    ccGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAt                        >  1:3070149/1‑93 (MQ=255)
                                                                     cGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAtt                       <  2:7635898/93‑1 (MQ=255)
                                                                     cGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAtt                       >  2:9817342/1‑93 (MQ=255)
                                                                      gccAGCACCTGCTGCGCGTCACCCAGGTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCTAGTCAGtg                      >  2:8932844/3‑93 (MQ=37)
                                                                      gTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtg                      >  2:10009306/1‑93 (MQ=255)
                                                                      gTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtg                      <  2:1380429/93‑1 (MQ=255)
                                                                         aGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgt                   <  2:6347081/93‑1 (MQ=255)
                                                                          gCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgtg                  >  1:8821191/1‑93 (MQ=255)
                                                                           ccccTGCTGCGCGCCAACCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGa                 <  2:9319952/91‑1 (MQ=38)
                                                                           cACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGa                 <  1:1544498/93‑1 (MQ=255)
                                                                             ccTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGaaa               <  2:1136309/93‑1 (MQ=255)
                                                                             ccTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGaaa               <  1:5159654/93‑1 (MQ=255)
                                                                              ctgctgCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAt              <  2:7090506/93‑1 (MQ=255)
                                                                               tgctgcGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc             <  2:679511/93‑1 (MQ=255)
                                                                               tgctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc             <  2:1587160/93‑1 (MQ=255)
                                                                               tgctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc             <  2:8218124/93‑1 (MQ=255)
                                                                                  tgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGc          <  1:1338347/93‑1 (MQ=255)
                                                                                   gcgcGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGca         >  2:4521244/1‑93 (MQ=255)
                                                                                   gcgcGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGca         <  1:8639019/93‑1 (MQ=255)
                                                                                     gcgTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcaca       >  1:2631291/1‑93 (MQ=255)
                                                                                     gcgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcaca       >  1:9180278/1‑93 (MQ=255)
                                                                                     gcgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcaca       <  1:1111906/93‑1 (MQ=255)
                                                                                       gTCACCCAGTTCTACAATCTGCCCGAGATGCATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATCGTGTGAAATCAGCACATa     <  2:7554080/93‑1 (MQ=255)
                                                                                       gTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATa     >  1:1095950/1‑93 (MQ=255)
                                                                                        tCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAg    <  1:4550698/93‑1 (MQ=255)
                                                                                          gCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGt  <  2:587978/93‑1 (MQ=255)
                                                                                          |                                                                                            
TTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGT  >  NC_000913/1555298‑1555480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: