BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,572,444	C→T	P261P (CCG→CCA)	pqqL ←	putative peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,572,444	0	C	T	91.1%	870.7 / 41.6	280	P261P (CCG→CCA)	pqqL	putative peptidase
Reads supporting (aligned to +/- strand): ref base C (15/10); new base T (139/116); total (154/126)
Fisher's exact test for biased strand distribution p-value = 6.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 288 total aligned reads displayed.

CCATTGGCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTGTCGATATC  >  NC_000913/1572353‑1572533

  aTTGGCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGc                                                                                        <  1:1960658/93‑1 (MQ=255)

   ttGGCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGcc                                                                                       >  2:8592704/1‑93 (MQ=255)

   ttGGCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGcc                                                                                       <  1:7326892/93‑1 (MQ=255)

    tGGCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCa                                                                                      <  2:757063/93‑1 (MQ=255)

      gCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGa                                                                                    <  1:3367720/93‑1 (MQ=255)

      gCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGa                                                                                    <  2:2298314/93‑1 (MQ=255)

      gCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAAGGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGa                                                                                    <  2:148110/93‑1 (MQ=255)

        aGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGAcg                                                                                  >  2:6690239/1‑93 (MQ=255)

         ggCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGAcgc                                                                                 >  1:461486/1‑93 (MQ=255)

          gCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGAcgcg                                                                                <  2:8441702/93‑1 (MQ=255)

          gCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGAcgcg                                                                                >  1:2436267/1‑93 (MQ=255)

            gATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGACGCGAt                                                                              >  2:6957082/1‑93 (MQ=255)

             ataataGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGAtt                                                                             >  1:4124599/1‑93 (MQ=255)

             ataataGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGAtt                                                                             >  2:7420376/1‑93 (MQ=255)

              taataGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGAttt                                                                            >  2:1125376/1‑93 (MQ=255)

              taataGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGAttt                                                                            <  1:3474907/93‑1 (MQ=255)

               aataGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGAtttt                                                                           >  1:509553/1‑93 (MQ=255)

                  agagTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAg                                                                        <  1:6615355/93‑1 (MQ=255)

                   gagTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAgc                                                                       >  2:2708754/1‑93 (MQ=255)

                      tGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAgctgc                                                                    >  1:1227673/1‑93 (MQ=255)

                         gATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCttt                                                                 >  1:8117918/1‑93 (MQ=255)

                         gATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCttt                                                                 <  1:2365135/93‑1 (MQ=255)

                         gATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCttt                                                                 <  2:5869333/93‑1 (MQ=255)

                          aTGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGACGCGATTTTCAGCTGCTTTg                                                                >  2:9682490/1‑93 (MQ=255)

                           tGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGt                                                               <  2:456093/93‑1 (MQ=255)

                            gCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGtt                                                              >  1:2054750/1‑93 (MQ=255)

                               gTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGc                                                           >  2:7257605/1‑93 (MQ=255)

                               gTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGc                                                           <  1:4184124/93‑1 (MQ=255)

                               gTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGc                                                           <  2:206776/93‑1 (MQ=255)

                                ttCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGcc                                                          >  1:4785151/1‑93 (MQ=255)

                                ttCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGcc                                                          >  2:5413174/1‑93 (MQ=255)

                                ttCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGcc                                                          <  1:786227/93‑1 (MQ=255)

                                 tCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGCCTTTTGTTGGACAGACGCGATTTTCAGCTGCTTTGTTAGCCg                                                         >  1:4919679/1‑93 (MQ=255)

                                  cACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCgg                                                        >  2:5794907/1‑93 (MQ=255)

                                   ccccGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGa                                                       <  2:2155843/92‑1 (MQ=255)

                                   aCCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGa                                                       >  1:5465108/1‑93 (MQ=255)

                                     ccGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAg                                                     >  1:1276325/1‑93 (MQ=255)

                                       ggTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGct                                                   >  2:192701/1‑93 (MQ=255)

                                       ggTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGct                                                   <  1:1420978/93‑1 (MQ=255)

                                        gTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGctt                                                  >  1:8534091/1‑93 (MQ=255)

                                         ttttCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGctta                                                 >  2:8554689/1‑93 (MQ=255)

                                         ttttCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGctta                                                 <  2:2681753/93‑1 (MQ=255)

                                          tttCTTTATCATAAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGcttac                                                <  2:9192743/93‑1 (MQ=255)

                                           ttCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGACAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGcttact                                               >  1:7453331/1‑93 (MQ=255)

                                            tCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGACGcttactt                                              >  1:4552250/1‑93 (MQ=255)

                                            tCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGcttactt                                              <  2:7103880/93‑1 (MQ=255)

                                            tCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGcttactt                                              >  2:5295401/1‑93 (MQ=255)

                                            tCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGcttactt                                              >  1:1032822/1‑93 (MQ=255)

                                               ttATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTaaa                                           >  2:5173174/1‑93 (MQ=255)

                                                tATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAAt                                          >  2:3513278/1‑93 (MQ=255)

                                                  tCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTa                                        >  1:8700053/1‑93 (MQ=255)

                                                    aTTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATc                                      >  2:1704603/1‑93 (MQ=255)

                                                     ttAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATcc                                     >  1:9291769/1‑93 (MQ=255)

                                                     ttAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATcc                                     >  1:6774508/1‑93 (MQ=255)

                                                     ttAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATcc                                     >  2:9301746/1‑93 (MQ=255)

                                                     ttAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATcc                                     <  2:9038271/93‑1 (MQ=255)

                                                      tAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCt                                    <  2:2534689/93‑1 (MQ=255)

                                                      tAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCt                                    <  1:5716552/93‑1 (MQ=255)

                                                       aaTGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCtt                                   >  1:697706/1‑93 (MQ=255)

                                                       aaTGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCtt                                   >  1:618386/1‑93 (MQ=255)

                                                         tGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTa                                 <  1:3056561/93‑1 (MQ=255)

                                                          gATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTAt                                <  2:503209/93‑1 (MQ=255)

                                                           atatTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATc                               <  1:2695103/93‑1 (MQ=255)

                                                            tatTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATca                              >  2:2890400/1‑93 (MQ=255)

                                                            tatTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATca                              <  2:3017177/93‑1 (MQ=255)

                                                            tatTAAAGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATca                              <  2:6519768/93‑1 (MQ=255)

                                                             atTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcag                             <  1:1106213/93‑1 (MQ=255)

                                                             atTAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcag                             >  1:2603931/1‑93 (MQ=255)

                                                              ttAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagc                            <  1:230053/93‑1 (MQ=255)

                                                              ttAAAGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagc                            <  1:9037934/93‑1 (MQ=255)

                                                                 aaGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgcc                         <  2:9969801/93‑1 (MQ=255)

                                                                 aaGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgcc                         >  2:4591170/1‑93 (MQ=255)

                                                                 aaGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgcc                         >  2:6405937/1‑93 (MQ=255)

                                                                 aaGCGCAGGGGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgcc                         >  2:462656/1‑93 (MQ=255)

                                                                  aGCGCAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgcca                        <  2:4304888/93‑1 (MQ=255)

                                                                  aGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgcca                        <  2:3684320/93‑1 (MQ=255)

                                                                   gcgcAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgccag                       >  1:2339517/1‑93 (MQ=255)

                                                                    ggcAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgccagc                      <  2:3183202/92‑1 (MQ=255)

                                                                    cgcAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgccagc                      >  2:8125400/1‑93 (MQ=255)

                                                                     gcAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGGTTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgccagcg                     >  2:4391574/1‑93 (MQ=255)

                                                                      cAGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATcagcgccagcgc                    >  2:2373259/1‑93 (MQ=255)

                                                                       aGGTGGTTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGct                   >  2:788351/1‑93 (MQ=255)

                                                                        ggtggtTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGctt                  <  2:3421626/93‑1 (MQ=255)

                                                                        ggtggtTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGctt                  >  1:9178267/1‑93 (MQ=255)

                                                                          tggtTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGcttct                >  1:7666010/1‑93 (MQ=255)

                                                                           ggtTTTCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGcttctt               >  1:4530286/1‑93 (MQ=255)

                                                                             ttttCGGCTTTTGTCGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTa             >  2:5245050/1‑93 (MQ=255)

                                                                              tttCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTAc            >  2:7358859/1‑93 (MQ=255)

                                                                              tttCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTAc            <  2:10013477/93‑1 (MQ=255)

                                                                              tttCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTAc            <  1:1489931/93‑1 (MQ=255)

                                                                               ttCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACt           <  1:3125786/93‑1 (MQ=255)

                                                                                tCGGCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCAAGCGCTTCTTTACtc          >  1:721460/1‑92 (MQ=255)

                                                                                  ggCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTgcc        <  2:3609213/93‑3 (MQ=255)

                                                                                  ggCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTgcc        >  1:9524128/1‑91 (MQ=255)

                                                                                  ggCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTgcc        >  1:961743/1‑91 (MQ=255)

                                                                                   gCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTGCCg       >  1:9744692/1‑93 (MQ=255)

                                                                                   gCTTTTGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTGCCg       >  2:4123721/1‑93 (MQ=255)

                                                                                   gCTTTTGTCGGCCAGACGCGACTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTGCCg       >  1:4052209/1‑93 (MQ=255)

                                                                                      tttGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTGCCGatt    >  2:8724938/1‑92 (MQ=255)

                                                                                      tttGTTGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTGCCGata    >  1:8167849/1‑93 (MQ=255)

CCATTGGCAGGCGATAATAGAGTGCGATGCCGTTCACCCGGTTTTCTTTATCATTAATGATATTAAAGCGCAGGTGGTTTTCGGCTTTTGTCGGCCAGACGCGATTTTCAGCTGCTTTGTTAGCCGGAAGCTTACTTAAATTATCCTTTATCAGCGCCAGCGCTTCTTTACTGTCGATATC  >  NC_000913/1572353‑1572533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`