Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,584,418 T→C I31M (ATA→ATG b1501 ← putative oxidoreductase major subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,584,4180TC92.5% 658.4 / 31.0 239I31M (ATA→ATGb1501putative oxidoreductase major subunit
Reads supporting (aligned to +/- strand):  ref base T (9/9);  new base C (125/96);  total (134/105)
Fisher's exact test for biased strand distribution p-value = 6.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.81e-01

Only 100 of 252 total aligned reads displayed.

GCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTC  >  NC_000913/1584329‑1584508
                                                                                         |                                                                                          
gCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGcata                                                                                         <  1:7199383/93‑1 (MQ=255)
 cACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCatat                                                                                        >  1:4215702/1‑93 (MQ=255)
 cACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCatat                                                                                        >  2:7550404/1‑93 (MQ=255)
  aCTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATc                                                                                       >  1:8540621/1‑93 (MQ=255)
   cTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATcc                                                                                      >  2:6523544/1‑93 (MQ=255)
    tgtgCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCa                                                                                     >  1:4379512/1‑93 (MQ=255)
     gtgCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCAt                                                                                    >  1:8864580/1‑93 (MQ=255)
       gCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCt                                                                                  <  1:1934382/93‑1 (MQ=255)
       gCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCt                                                                                  <  1:2688810/93‑1 (MQ=255)
         ttAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGc                                                                                >  2:4645875/1‑93 (MQ=255)
         ttAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGc                                                                                <  1:4657800/93‑1 (MQ=255)
          tAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCt                                                                               >  1:7165306/1‑93 (MQ=255)
          tAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCt                                                                               >  2:5963528/1‑93 (MQ=255)
          tAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCt                                                                               <  2:9312141/93‑1 (MQ=255)
           aGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCtt                                                                              >  2:1683446/1‑93 (MQ=255)
            ggATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTa                                                                             <  1:9264882/93‑1 (MQ=255)
             gATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTAc                                                                            >  1:1998190/1‑93 (MQ=255)
             gATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTAc                                                                            <  2:5344854/93‑1 (MQ=255)
             gATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTAc                                                                            <  1:5860662/93‑1 (MQ=255)
              aTCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACg                                                                           >  2:8165213/1‑93 (MQ=255)
              aTCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACg                                                                           >  1:2569797/1‑93 (MQ=255)
               tCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGt                                                                          >  2:7078080/1‑93 (MQ=255)
                cTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTa                                                                         <  2:7314637/93‑1 (MQ=255)
                 tGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTAc                                                                        <  2:213470/93‑1 (MQ=255)
                 tGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTAc                                                                        <  1:4733695/93‑1 (MQ=255)
                  ggCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACt                                                                       >  2:7936982/1‑93 (MQ=255)
                      aTGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCAt                                                                   >  1:9597140/1‑93 (MQ=255)
                       tGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGTGCATATCCATCTGCTTACGTACTGCAtt                                                                  >  1:7019597/1‑93 (MQ=255)
                       tGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCAtt                                                                  <  1:6491837/93‑1 (MQ=255)
                        gCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTc                                                                 <  1:9699763/93‑1 (MQ=255)
                         cacaACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCg                                                                >  1:8017966/1‑93 (MQ=255)
                           caACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCt                                                              <  2:5047402/93‑1 (MQ=255)
                            aaCCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTa                                                             >  1:597371/1‑93 (MQ=255)
                             aCCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTAc                                                            >  2:2746408/1‑93 (MQ=255)
                             aCCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTAc                                                            <  1:2151109/93‑1 (MQ=255)
                             aCCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTAc                                                            >  2:90953/1‑93 (MQ=255)
                                 ggACAGTCAAAGGCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCAATCGCTACGGAt                                                        >  2:1952674/1‑93 (MQ=255)
                                      gTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAAc                                                   >  1:686192/1‑93 (MQ=255)
                                       tCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACa                                                  <  1:51218/93‑1 (MQ=255)
                                         aaaGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGc                                                <  1:1770301/93‑1 (MQ=255)
                                          aaGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCa                                               <  2:1808647/93‑1 (MQ=255)
                                            gCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAcc                                             <  1:1644313/93‑1 (MQ=255)
                                             cccTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAccc                                            >  2:7119367/1‑93 (MQ=255)
                                              ccTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCAcccc                                           <  2:9854337/93‑1 (MQ=255)
                                                tctGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCaa                                         >  2:3006642/1‑93 (MQ=255)
                                                tctGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCaa                                         <  2:5154032/93‑1 (MQ=255)
                                                tctGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCaa                                         >  2:761015/1‑93 (MQ=255)
                                                  tGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGCTTTAACAGCACCCCAacc                                       >  1:4601081/1‑93 (MQ=255)
                                                  tGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAacc                                       <  2:3511863/93‑1 (MQ=255)
                                                   ggCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAacca                                      >  2:6953989/1‑93 (MQ=255)
                                                    gCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccac                                     >  2:1377011/1‑93 (MQ=255)
                                                    gCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccac                                     <  1:3221846/93‑1 (MQ=255)
                                                    gCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccac                                     <  1:3090004/93‑1 (MQ=255)
                                                    gCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccac                                     >  1:7784901/1‑93 (MQ=255)
                                                    gCTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccac                                     <  1:8298595/93‑1 (MQ=255)
                                                     cTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccacc                                    <  2:9526333/93‑1 (MQ=255)
                                                     cTTATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAaccacc                                    <  1:8502320/93‑1 (MQ=255)
                                                      ttATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCt                                   >  2:4186602/1‑93 (MQ=255)
                                                      ttATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCt                                   >  2:8330154/1‑93 (MQ=255)
                                                       tATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTg                                  <  2:9018424/93‑1 (MQ=255)
                                                       tATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTg                                  >  2:6869065/1‑93 (MQ=255)
                                                       tATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTg                                  <  2:4708671/93‑1 (MQ=255)
                                                       tATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTg                                  >  1:5652973/1‑93 (MQ=255)
                                                       tATTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTg                                  >  1:8187234/1‑93 (MQ=255)
                                                        aTTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgc                                 <  1:1075745/93‑1 (MQ=255)
                                                        aTTCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgc                                 <  1:6923820/93‑1 (MQ=255)
                                                         ttCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgca                                >  1:6266251/1‑93 (MQ=255)
                                                         ttCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgca                                >  1:7338056/1‑93 (MQ=255)
                                                          tCATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTgcag                               >  2:6270358/1‑93 (MQ=255)
                                                           cATGTCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCCCCCCAACCACCTgcagc                              <  1:4195198/93‑1 (MQ=255)
                                                               tCAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCAccc                          >  2:8267512/1‑93 (MQ=255)
                                                                cAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCt                         >  1:659505/1‑93 (MQ=255)
                                                                cAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCt                         >  1:7425374/1‑93 (MQ=255)
                                                                cAAACATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCt                         >  2:2271700/1‑93 (MQ=255)
                                                                 aaaCATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTg                        >  2:6207584/1‑93 (MQ=255)
                                                                  aaCATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTgg                       >  2:4931758/1‑93 (MQ=255)
                                                                    cATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTTCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTa                     <  1:1232549/93‑1 (MQ=255)
                                                                    cATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTa                     <  1:7525878/93‑1 (MQ=255)
                                                                    cATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTa                     <  1:4447675/93‑1 (MQ=255)
                                                                    cATGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTa                     <  2:3141736/93‑1 (MQ=255)
                                                                     aTGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAg                    >  1:3317294/1‑93 (MQ=255)
                                                                      tGGCAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAgg                   >  2:455346/1‑93 (MQ=255)
                                                                       ggCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGa                  <  1:5570582/93‑1 (MQ=255)
                                                                         cAATAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGAtt                <  1:3731027/93‑1 (MQ=255)
                                                                           aTAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCa              >  2:4062633/1‑93 (MQ=255)
                                                                           aTAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCa              >  1:3949943/1‑93 (MQ=255)
                                                                            tAACATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCaa             >  1:9376435/1‑93 (MQ=255)
                                                                             aaCATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCATCCACCTGCAGCACCCTGGTAGGATTCAAt            <  2:6560810/93‑1 (MQ=255)
                                                                             aaCATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAt            <  2:7382526/93‑1 (MQ=255)
                                                                             aaCATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAt            <  1:2437033/93‑1 (MQ=255)
                                                                             aaCATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAt            >  2:9695852/1‑93 (MQ=255)
                                                                              aCATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAtt           >  1:7066714/1‑93 (MQ=255)
                                                                              aCATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAtt           >  2:8846208/1‑93 (MQ=255)
                                                                               cATCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCACttt          >  1:7684225/1‑93 (MQ=255)
                                                                                aTCCTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAtttt         >  1:6180297/1‑93 (MQ=255)
                                                                                  ccTGGCGCATATCCATCTTCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAtttttt       <  1:5343304/93‑1 (MQ=255)
                                                                                   cTGGCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAAttttttt      >  1:3118624/1‑93 (MQ=255)
                                                                                     ggCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttct    <  2:5907728/93‑1 (MQ=255)
                                                                                     ggCGCATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttct    <  2:2609991/93‑1 (MQ=255)
                                                                                      gcgcATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTttctt   >  2:3292842/1‑93 (MQ=255)
                                                                                         |                                                                                          
GCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTC  >  NC_000913/1584329‑1584508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: