Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,598,927 T→C L113L (TTA→TTG ydeW ← putative transcriptional regulator, sorC family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,598,9270TC99.6% 823.4 / NA 251L113L (TTA→TTGydeWputative transcriptional regulator, sorC family
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (127/123);  minor base A (1/0);  total (128/123)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 257 total aligned reads displayed.

TTGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAG  >  NC_000913/1598837‑1599016
                                                                                          |                                                                                         
 tGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCaaa                                                                                        >  2:1154061/1‑93 (MQ=255)
 tGCTGTAACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCaaa                                                                                        >  2:6566013/1‑93 (MQ=255)
  gCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAAc                                                                                       >  1:1910140/1‑93 (MQ=255)
  gCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAAc                                                                                       <  2:4032621/93‑1 (MQ=255)
    tgtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtc                                                                                     <  2:5981593/93‑1 (MQ=255)
    tgtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATAGCCAGCATCTGTTGTGGTTGAAGCAAACtc                                                                                     >  1:5992729/1‑93 (MQ=255)
     gtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtca                                                                                    >  2:6113287/1‑93 (MQ=255)
     gtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtca                                                                                    <  1:704715/93‑1 (MQ=255)
     gtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtca                                                                                    >  2:6373623/1‑93 (MQ=255)
       gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc                                                                                  >  2:8774220/1‑93 (MQ=255)
        aCGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACacatca                                                                                 <  2:481141/93‑1 (MQ=255)
         cGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCaa                                                                                <  2:4906258/93‑1 (MQ=255)
          gAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAAc                                                                               >  1:4073375/1‑93 (MQ=255)
           aaaTAAAACCACTTAAGCGTTGCAGCGTATCCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACa                                                                              <  2:9821506/93‑1 (MQ=255)
           aaaTAAAACCACTTAAGCGTTGCAGCGTACTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACa                                                                              <  2:73962/93‑1 (MQ=255)
            aaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACat                                                                             >  2:7911445/1‑93 (MQ=255)
            aaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACat                                                                             >  2:9382514/1‑93 (MQ=255)
             aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACgta                                                                            >  1:8126326/1‑93 (MQ=255)
             aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACata                                                                            <  2:2103251/93‑1 (MQ=255)
             aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACata                                                                            <  2:7537752/93‑1 (MQ=255)
             aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACata                                                                            >  1:6210952/1‑93 (MQ=255)
              tAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACatat                                                                           >  1:8549426/1‑93 (MQ=255)
              tAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACatat                                                                           >  2:4714124/1‑93 (MQ=255)
              tAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACatat                                                                           >  2:5488009/1‑93 (MQ=255)
               aaaaCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATg                                                                          <  2:4404180/93‑1 (MQ=255)
                aaaCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgc                                                                         >  1:5797711/1‑93 (MQ=255)
                  aCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgc                                                                       >  2:3019553/1‑93 (MQ=255)
                   ccACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgcc                                                                      >  1:2363652/1‑93 (MQ=255)
                   ccACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgcc                                                                      >  2:6890595/1‑93 (MQ=255)
                    cACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccg                                                                     <  1:7427604/93‑1 (MQ=255)
                    cACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccg                                                                     <  2:5257346/93‑1 (MQ=255)
                    cACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGAATCTGTTGTCGTTGAAGCAAACTCATCAACATATgcgccg                                                                     >  2:1801405/1‑93 (MQ=255)
                      cTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcg                                                                   >  1:6468236/1‑93 (MQ=255)
                      cTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcg                                                                   >  2:6077129/1‑93 (MQ=255)
                       ttAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgc                                                                  >  2:3920761/1‑93 (MQ=255)
                       ttAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgc                                                                  <  1:3058823/93‑1 (MQ=255)
                        tAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgcc                                                                 <  2:7232876/93‑1 (MQ=255)
                        tAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgcc                                                                 >  2:4585268/1‑93 (MQ=255)
                         aaGCTTTGCAGCGTATTCATGGTTGCCTCGCCAACACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCt                                                                <  1:1060547/93‑1 (MQ=255)
                         aaGCGTTGCAGCGTATTCATGGATGCCTCGCCAAAACCAATCGCCAGAATCTATTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCt                                                                >  2:7025167/1‑93 (MQ=255)
                          aGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAGCATATGCGACGCGCCTa                                                               <  2:6672365/93‑1 (MQ=255)
                          aGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTa                                                               <  2:6095040/93‑1 (MQ=255)
                          aGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTa                                                               <  1:7110494/93‑1 (MQ=255)
                             gTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcc                                                            >  2:8868796/1‑93 (MQ=255)
                             gTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcc                                                            >  2:3450198/1‑93 (MQ=255)
                              ttGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATccc                                                           >  1:9317056/1‑93 (MQ=255)
                              ttGCAGCGTATTCATGGTGGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATccc                                                           <  1:6050282/93‑1 (MQ=255)
                               tGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcccc                                                          <  2:8172973/93‑1 (MQ=255)
                                tcAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa                                                         <  1:3093842/92‑1 (MQ=255)
                                tcAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa                                                         <  2:7891778/92‑1 (MQ=255)
                                gCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa                                                         <  1:1726741/93‑1 (MQ=255)
                                 cAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAg                                                        >  1:9824709/1‑93 (MQ=255)
                                   gCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTc                                                      >  2:2864609/1‑93 (MQ=255)
                                    cGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCg                                                     <  1:7976544/93‑1 (MQ=255)
                                      tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGcc                                                   <  1:7510718/93‑1 (MQ=255)
                                      tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGcc                                                   >  2:8389496/1‑93 (MQ=255)
                                      tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGcc                                                   >  2:4119915/1‑93 (MQ=255)
                                       aTTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGccc                                                  <  2:761960/93‑1 (MQ=255)
                                        ttCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTTAAGCAAACTCATCAACATATGCGCCGCGCCTACCCCCAGTCGCCCa                                                 >  2:8635469/1‑93 (MQ=255)
                                        ttCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCa                                                 >  1:4628119/1‑93 (MQ=255)
                                         tCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCAc                                                >  2:233522/1‑93 (MQ=255)
                                          cATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCAcc                                               <  1:3994263/93‑1 (MQ=255)
                                           aTGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCg                                              >  2:1964103/1‑93 (MQ=255)
                                            tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa                                             <  1:7696453/93‑1 (MQ=255)
                                            tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa                                             <  1:10013190/93‑1 (MQ=255)
                                                tGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATc                                         <  2:4107664/93‑1 (MQ=255)
                                                tGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATc                                         <  1:5651831/93‑1 (MQ=255)
                                                  ccTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAg                                       >  1:246976/1‑93 (MQ=255)
                                                   cTCGCGAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACCCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCCCCGACATCAGc                                      <  2:5137178/93‑1 (MQ=255)
                                                     cGCCAAAACCAATCGCCAGTATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACAGACATCAGCAt                                    >  2:9881917/1‑93 (MQ=255)
                                                     cGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCAt                                    >  1:8240322/1‑93 (MQ=255)
                                                     cGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCAt                                    <  1:3551667/93‑1 (MQ=255)
                                                     cGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCAt                                    <  1:4685381/93‑1 (MQ=255)
                                                       ccAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATcc                                  <  1:4319376/93‑1 (MQ=255)
                                                        cAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAAATCATCAACATATGCGCCGCGCCTATCCCCAGTCGACCACCGACATCAGCACCCg                                 >  1:2570163/1‑93 (MQ=255)
                                                         aaaaCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGc                                >  1:5507692/1‑93 (MQ=255)
                                                         aaaaCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGc                                >  1:3011697/1‑93 (MQ=255)
                                                           aaCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCaa                              <  1:9031637/93‑1 (MQ=255)
                                                           aaCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCaa                              <  2:5534762/93‑1 (MQ=255)
                                                            aCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAg                             >  1:9505364/1‑93 (MQ=255)
                                                             ccAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGc                            <  2:326579/93‑1 (MQ=255)
                                                                aTCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCa                         <  2:9681451/93‑1 (MQ=255)
                                                                 tCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAg                        <  2:4670490/93‑1 (MQ=255)
                                                                    ccAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGa                     <  2:5608182/93‑1 (MQ=255)
                                                                    ccAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGa                     <  2:9316201/93‑1 (MQ=255)
                                                                     cAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGAt                    <  2:4877791/93‑1 (MQ=255)
                                                                       gCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCa                  >  1:8802251/1‑93 (MQ=255)
                                                                       gCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCa                  >  1:2714419/1‑93 (MQ=255)
                                                                       gCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCa                  <  1:1177493/93‑1 (MQ=255)
                                                                         aTCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCAcc                <  1:5027676/93‑1 (MQ=255)
                                                                          tCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCAccc               >  1:3938336/1‑93 (MQ=255)
                                                                            tgttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCgg             >  1:6018674/1‑93 (MQ=255)
                                                                             gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCggc            >  1:3854872/1‑92 (MQ=255)
                                                                             gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGa            >  2:1581838/1‑93 (MQ=255)
                                                                               tgtgGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATGCCCAGTAGACCACCGGCATCAGCATCCGCAAGCCCAGGGATCACCCGGACa          >  2:3982187/1‑93 (MQ=255)
                                                                                gtgGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGCTCACCCGGACAt         >  1:3410959/1‑93 (MQ=255)
                                                                                gtgGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACAt         >  1:1278035/1‑93 (MQ=255)
                                                                                 tgGTTGAAGCAAACTCATCAACATATGCCCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCCCCCGGACATg        <  1:6185021/93‑1 (MQ=255)
                                                                                  ggTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGt       >  2:6488428/1‑93 (MQ=255)
                                                                                      gAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCa   >  2:2723121/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAG  >  NC_000913/1598837‑1599016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: