BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,616,549	A→G	S128S (AGT→AGC)	ydeB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,616,549	0	A	G	99.5%	662.3 / ‑4.8	204	S128S (AGT→AGC)	ydeB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (104/99); minor base T (1/0); total (105/99)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01

Only 100 of 209 total aligned reads displayed.

AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAAT  >  NC_000913/1616459‑1616638

aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCt                                                                                         >  1:7155889/1‑93 (MQ=255)

 aCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCtt                                                                                        <  2:6719392/93‑1 (MQ=255)

    aTCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGc                                                                                     >  2:5657868/1‑93 (MQ=255)

     tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCCCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa                                                                                    <  1:139649/93‑1 (MQ=255)

     tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa                                                                                    <  1:6106875/93‑1 (MQ=255)

     tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa                                                                                    <  1:7932462/93‑1 (MQ=255)

     tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa                                                                                    >  2:4256540/1‑93 (MQ=255)

     tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa                                                                                    <  2:4290604/93‑1 (MQ=255)

      cAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAt                                                                                   >  1:3526711/1‑93 (MQ=255)

      cAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCACTATGGTTCCCGGACCGGCAGTGCTTGGCAt                                                                                   >  2:907669/1‑93 (MQ=255)

       aGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAtt                                                                                  <  2:6235538/93‑1 (MQ=255)

         tACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGc                                                                                <  2:3982569/93‑1 (MQ=255)

         tACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGc                                                                                >  2:5177963/1‑93 (MQ=255)

          aCCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGcc                                                                               <  1:3106185/93‑1 (MQ=255)

           cccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCa                                                                              >  1:6423548/1‑93 (MQ=255)

              aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCg                                                                           <  1:8914210/93‑1 (MQ=255)

               aTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGGCAGCgg                                                                          >  2:2453818/1‑93 (MQ=255)

               aTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCgg                                                                          >  1:7498659/1‑93 (MQ=255)

                tCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCgca                                                                         >  2:8859865/1‑91 (MQ=255)

                tCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGc                                                                         >  1:2835613/1‑93 (MQ=255)

                 cAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGca                                                                        <  2:2403699/93‑1 (MQ=255)

                   gCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGcaca                                                                      >  2:7649791/1‑93 (MQ=255)

                      aaGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAg                                                                   >  2:5106087/1‑93 (MQ=255)

                      aaGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAg                                                                   >  1:7615001/1‑93 (MQ=255)

                      aaGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGCAATTGCCAGCGGCACAAAg                                                                   >  1:3277165/1‑93 (MQ=255)

                         gTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCa                                                                <  1:1016812/93‑1 (MQ=255)

                            gAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAata                                                             >  1:9945849/1‑93 (MQ=255)

                             aaCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAatat                                                            <  1:6873388/93‑1 (MQ=255)

                             aaCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAatat                                                            >  2:913555/1‑93 (MQ=255)

                              aCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATAtt                                                           <  2:5382648/93‑1 (MQ=255)

                               ctctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTg                                                          >  1:2098655/1‑93 (MQ=255)

                               ctctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCCGCACAAAGGCAATATTg                                                          >  2:753441/1‑93 (MQ=255)

                                tctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTgg                                                         <  2:4083888/93‑1 (MQ=255)

                                tctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTgg                                                         <  2:5911046/93‑1 (MQ=255)

                                 ctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc                                                        <  2:1547910/93‑1 (MQ=255)

                                 ctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc                                                        >  2:3404402/1‑93 (MQ=255)

                                 ctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc                                                        >  2:7362310/1‑93 (MQ=255)

                                  tGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCTCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCa                                                       <  1:620434/93‑1 (MQ=255)

                                   gACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTCCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc                                                      <  1:6985164/93‑1 (MQ=255)

                                    aCGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAcc                                                     >  2:1757044/1‑92 (MQ=255)

                                    aCGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAcc                                                     >  1:1984754/1‑92 (MQ=255)

                                      gCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCgg                                                   <  1:3808725/93‑1 (MQ=255)

                                      ccACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCgg                                                   <  2:5552647/92‑1 (MQ=255)

                                        aCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGt                                                 <  2:8179734/93‑1 (MQ=255)

                                         cTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGtt                                                <  2:3987924/93‑1 (MQ=255)

                                          tgtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTTCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGtcc                                               >  2:8491046/1‑91 (MQ=255)

                                           gtgGACGCCGAGCTAATAATCATCGGTATGGTTCCCAGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCa                                              >  2:2867789/1‑93 (MQ=255)

                                           gtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCa                                              >  2:5043361/1‑93 (MQ=255)

                                           gtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCa                                              <  2:6543401/93‑1 (MQ=255)

                                            tgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAt                                             <  1:5822594/93‑1 (MQ=255)

                                               aCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCtt                                          <  1:4124397/93‑1 (MQ=255)

                                               aCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCtt                                          <  1:5284179/93‑1 (MQ=255)

                                                cGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTc                                         >  2:4681336/1‑93 (MQ=255)

                                                 gCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc                                        <  1:4772465/93‑1 (MQ=255)

                                                 gCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc                                        >  2:9200005/1‑93 (MQ=255)

                                                  ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa                                       <  1:2282677/93‑1 (MQ=255)

                                                  ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa                                       <  2:3223817/93‑1 (MQ=255)

                                                  ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa                                       <  2:3094938/93‑1 (MQ=255)

                                                   cGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAg                                      <  1:9520115/93‑1 (MQ=255)

                                                    gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc                                     >  2:2622960/1‑93 (MQ=255)

                                                    gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc                                     >  2:2745641/1‑93 (MQ=255)

                                                     aGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGct                                    >  1:1217761/1‑93 (MQ=255)

                                                      gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc                                   >  1:6593571/1‑93 (MQ=255)

                                                      gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc                                   >  2:7577340/1‑93 (MQ=255)

                                                      gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc                                   <  2:44959/93‑1 (MQ=255)

                                                       cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct                                  <  1:6270108/93‑1 (MQ=255)

                                                       cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct                                  >  1:7451504/1‑93 (MQ=255)

                                                       cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct                                  >  2:4835336/1‑93 (MQ=255)

                                                         aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc                                >  2:9202709/1‑93 (MQ=255)

                                                         aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc                                >  1:4429586/1‑93 (MQ=255)

                                                           taatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCg                              >  1:9074154/1‑93 (MQ=255)

                                                           taatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCg                              >  1:8188930/1‑93 (MQ=255)

                                                            aatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGGTCATCTTCCAGCTCTTCCGa                             >  1:4983033/1‑93 (MQ=255)

                                                              tcatcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACt                           >  2:9575984/1‑93 (MQ=255)

                                                                atcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTg                         >  1:1595907/1‑93 (MQ=255)

                                                                 tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTgt                        >  1:8607592/1‑92 (MQ=255)

                                                                 tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGc                        >  2:7147076/1‑93 (MQ=255)

                                                                  cGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCt                       <  1:1314840/93‑1 (MQ=255)

                                                                   gCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtt                      >  2:6123279/1‑93 (MQ=255)

                                                                    cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt                     <  1:2247522/93‑1 (MQ=255)

                                                                    cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt                     >  1:2928202/1‑93 (MQ=255)

                                                                    cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt                     <  2:2543050/93‑1 (MQ=255)

                                                                     tATGGTTCCCGGACCGGCAGTGCTTTGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt                    >  1:8459643/1‑93 (MQ=255)

                                                                     tATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt                    <  1:7726656/93‑1 (MQ=255)

                                                                     tATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt                    >  2:8395524/1‑93 (MQ=255)

                                                                      aTGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTc                   >  2:8637013/1‑93 (MQ=255)

                                                                       tGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCg                  >  2:9797714/1‑93 (MQ=255)

                                                                           tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc              <  1:7806400/93‑1 (MQ=255)

                                                                           tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc              <  1:6541451/93‑1 (MQ=255)

                                                                           tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc              <  1:3994273/93‑1 (MQ=255)

                                                                               ggACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCTCCTCCCGt          >  2:6822900/1‑93 (MQ=255)

                                                                                gACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTg         <  2:3072628/93‑1 (MQ=255)

                                                                                 aCCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGa        <  1:5139884/93‑1 (MQ=255)

                                                                                   cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat      >  2:2674392/1‑93 (MQ=255)

                                                                                   cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat      >  2:2040093/1‑93 (MQ=255)

                                                                                    ggCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatc     <  2:9290517/93‑1 (MQ=255)

                                                                                     gCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatca    <  1:7311970/93‑1 (MQ=255)

                                                                                      cAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaa   >  1:9698541/1‑93 (MQ=255)

                                                                                       aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat  <  2:8283690/93‑1 (MQ=255)

                                                                                       aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat  <  1:2772863/93‑1 (MQ=255)

AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAAT  >  NC_000913/1616459‑1616638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`