Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,689,391 G→A intergenic (+7/+219) ydgA → / ← uidC hypothetical protein/membrane‑associated protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,689,3910GA99.6% 944.1 / NA 264intergenic (+7/+219)ydgA/uidChypothetical protein/membrane‑associated protein
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (120/143);  total (120/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 265 total aligned reads displayed.

AAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACC  >  NC_000913/1689301‑1689478
                                                                                          |                                                                                       
aaaaTGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGAcc                                                                                       >  2:1017004/1‑93 (MQ=255)
 aaaTGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGATCCGGCCGTACCGGCAATTCCGCAGCAGTAATTCACGACCa                                                                                      >  1:755728/1‑93 (MQ=255)
  aaTGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCaa                                                                                     <  1:138956/93‑1 (MQ=255)
    tGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCaaaa                                                                                   <  1:8764780/93‑1 (MQ=255)
     gTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAAc                                                                                  <  2:9726099/93‑1 (MQ=255)
        gTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGcc                                                                               >  2:7177837/1‑93 (MQ=255)
        gTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGcc                                                                               <  2:5575660/93‑1 (MQ=255)
         ttAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCg                                                                              >  1:5443922/1‑93 (MQ=255)
         ttAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCg                                                                              <  1:4641139/93‑1 (MQ=255)
          tAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCgg                                                                             >  1:9081293/1‑93 (MQ=255)
           agaagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGga                                                                            >  2:9858905/1‑93 (MQ=255)
           agaagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGga                                                                            >  2:8589326/1‑93 (MQ=255)
           agaagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGga                                                                            >  2:5163150/1‑93 (MQ=255)
            gaagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGgag                                                                           >  2:6415479/1‑93 (MQ=255)
             aagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGgaga                                                                          <  1:6571962/93‑1 (MQ=255)
             aagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGgaga                                                                          <  1:7779151/93‑1 (MQ=255)
                aTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtt                                                                       <  2:3059174/93‑1 (MQ=255)
                aTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtt                                                                       <  2:9147375/93‑1 (MQ=255)
                 ttttGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAttt                                                                      >  1:1535543/1‑93 (MQ=255)
                     gttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAc                                                                  >  1:1718417/1‑93 (MQ=255)
                       tgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTc                                                                <  2:7940706/93‑1 (MQ=255)
                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTcc                                                               <  1:5184307/93‑1 (MQ=255)
                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                               <  1:528541/93‑1 (MQ=255)
                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                               <  2:9615995/93‑1 (MQ=255)
                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                               >  1:8245409/1‑93 (MQ=255)
                          cATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCgg                                                             <  1:8780105/93‑1 (MQ=255)
                           aTGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGc                                                            <  1:953970/93‑1 (MQ=255)
                           aTGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGc                                                            >  1:4957172/1‑93 (MQ=255)
                            tGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCg                                                           >  2:1673788/1‑93 (MQ=255)
                            tGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCg                                                           >  2:7428297/1‑93 (MQ=255)
                             gTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGt                                                          >  1:950018/1‑93 (MQ=255)
                             gTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGAACAAAACGCCGGAGAATTTTCACTCCGGCGt                                                          <  1:2848532/93‑1 (MQ=255)
                              tttGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGtt                                                         >  2:3625731/1‑93 (MQ=255)
                              tttGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGtt                                                         >  2:7042553/1‑93 (MQ=255)
                                   gATGCCAGCTCTTACCGTTCCGGCTGTGCCGGCAATTCCGCAGCAGTAATCCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCAt                                                    <  1:4223891/93‑1 (MQ=255)
                                   gATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCAt                                                    <  1:7260524/93‑1 (MQ=255)
                                    aTGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATc                                                   >  2:3740559/1‑93 (MQ=255)
                                    aTGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATc                                                   >  1:3525458/1‑93 (MQ=255)
                                     tGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGAAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCt                                                  >  2:8442852/1‑93 (MQ=255)
                                      tccAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTg                                                 <  1:241989/92‑1 (MQ=255)
                                       ccAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGa                                                <  1:6530358/93‑1 (MQ=255)
                                         aGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaaa                                              <  1:3216169/93‑1 (MQ=255)
                                          gCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaaaa                                             >  1:3634548/1‑93 (MQ=255)
                                            tctTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaaca                                           <  2:7823479/93‑1 (MQ=255)
                                            tctTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaaca                                           <  2:2614842/93‑1 (MQ=255)
                                             ctTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacca                                          >  2:1080361/1‑91 (MQ=255)
                                             ctTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaa                                          <  1:494366/93‑1 (MQ=255)
                                              ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaa                                         >  1:9699668/1‑93 (MQ=255)
                                                aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc                                       <  2:6542879/93‑1 (MQ=255)
                                                aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc                                       >  2:8093304/1‑93 (MQ=255)
                                                 aCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCa                                      <  1:8585674/93‑1 (MQ=255)
                                                 aCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCa                                      <  1:273335/93‑1 (MQ=255)
                                                   gTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCaga                                    <  1:9032256/93‑1 (MQ=255)
                                                    ttCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAGTCCGGCGTTTTCATCTGAAAACAAACCagag                                   <  2:5304749/93‑1 (MQ=255)
                                                    ttCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCagag                                   >  2:3995320/1‑93 (MQ=255)
                                                    ttCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCagag                                   >  1:9238282/1‑93 (MQ=255)
                                                     tCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATGTGAAAACAAACCAgaga                                  >  1:4192325/1‑93 (MQ=255)
                                                     tCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAgaga                                  >  2:2041874/1‑93 (MQ=255)
                                                       cGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCGCTCCGGCGTTTTCATCTGAAAACAAACCAGAGAtt                                <  1:7071981/93‑1 (MQ=255)
                                                       cGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGAtt                                <  2:4200115/93‑1 (MQ=255)
                                                       cGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGAtt                                <  1:9438971/93‑1 (MQ=255)
                                                       cGGCTGTACCGACAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGAtt                                <  1:3901491/93‑1 (MQ=255)
                                                          cTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGcc                             <  1:33955/93‑1 (MQ=255)
                                                           tGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCt                            >  1:8355961/1‑93 (MQ=255)
                                                           tGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCt                            <  2:5966173/93‑1 (MQ=255)
                                                           tGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCt                            >  1:4318978/1‑93 (MQ=255)
                                                            gTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTg                           >  1:1276965/1‑93 (MQ=255)
                                                            gTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTg                           >  1:195695/1‑93 (MQ=255)
                                                             tACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGa                          <  2:2141200/93‑1 (MQ=255)
                                                             tACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGa                          <  2:4630741/93‑1 (MQ=255)
                                                             tACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGa                          <  2:4955513/93‑1 (MQ=255)
                                                              aCCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGAt                         <  1:7368301/93‑1 (MQ=255)
                                                              aCCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGAt                         <  2:2712202/93‑1 (MQ=255)
                                                               ccGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATg                        <  1:3481442/93‑1 (MQ=255)
                                                                cGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgc                       >  1:2138040/1‑93 (MQ=255)
                                                                cGGCAATGCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgc                       <  1:6301951/93‑1 (MQ=255)
                                                                  gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc                     >  2:9019011/1‑93 (MQ=255)
                                                                  gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc                     <  2:6883024/93‑1 (MQ=255)
                                                                  gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc                     <  2:6535659/93‑1 (MQ=255)
                                                                   cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt                    <  1:8555623/93‑1 (MQ=255)
                                                                   cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt                    >  2:8771807/1‑93 (MQ=255)
                                                                    aaTTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTa                   <  2:1548468/93‑1 (MQ=255)
                                                                    aaTTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTa                   <  2:7729102/93‑1 (MQ=255)
                                                                    aaTTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTa                   <  2:6111266/93‑1 (MQ=255)
                                                                       tCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGc                >  2:5923572/1‑93 (MQ=255)
                                                                        ccGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCt               >  1:5698634/1‑93 (MQ=255)
                                                                         cGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCtt              <  1:3022465/93‑1 (MQ=255)
                                                                           cagcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTAt            <  1:996767/93‑1 (MQ=255)
                                                                            agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc           <  1:988132/93‑1 (MQ=255)
                                                                            agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc           >  2:2320367/1‑93 (MQ=255)
                                                                            agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc           <  1:8127933/93‑1 (MQ=255)
                                                                            agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc           >  1:4744377/1‑93 (MQ=255)
                                                                             gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa          <  2:7705412/93‑1 (MQ=255)
                                                                             gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTACGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa          <  2:8344593/93‑1 (MQ=255)
                                                                              cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg         <  1:8907046/93‑1 (MQ=255)
                                                                                 tAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGcc      <  1:6107513/93‑1 (MQ=255)
                                                                                 tAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGcc      >  1:9140246/1‑93 (MQ=255)
                                                                                  aaTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCt     >  2:2591542/1‑93 (MQ=255)
                                                                                  aaTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCt     >  1:1224268/1‑93 (MQ=255)
                                                                                  aaTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCt     >  2:4815891/1‑93 (MQ=255)
                                                                                          |                                                                                       
AAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACC  >  NC_000913/1689301‑1689478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: