BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,698,072	C→T	R232C (CGT→TGT)	malX →	MalX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,698,072	0	C	T	99.5%	736.8 / ‑5.2	204	R232C (CGT→TGT)	malX	MalX
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (99/104); total (100/104)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.23e-01

Only 100 of 212 total aligned reads displayed.

TGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAA  >  NC_000913/1697982‑1698161

tGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGt                                                                                         >  1:638901/1‑93 (MQ=255)

 ggCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTc                                                                                        <  2:4461820/93‑1 (MQ=255)

  gCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTct                                                                                       >  1:1412485/1‑93 (MQ=255)

  gCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTct                                                                                       >  2:4731934/1‑93 (MQ=255)

   ccGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTctg                                                                                      <  1:6814610/93‑1 (MQ=255)

       ttttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGt                                                                                  >  2:2139874/1‑93 (MQ=255)

       ttttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGt                                                                                  <  1:8151419/93‑1 (MQ=255)

       ttttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGt                                                                                  >  1:2942124/1‑93 (MQ=255)

         ttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTg                                                                                <  2:4988557/93‑1 (MQ=255)

          tCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGc                                                                               <  1:7641853/93‑1 (MQ=255)

          tCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGc                                                                               <  1:5221406/93‑1 (MQ=255)

           cGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGcc                                                                              >  2:4107722/1‑93 (MQ=255)

             ccATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGt                                                                            >  2:9843777/1‑93 (MQ=255)

             ccATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGt                                                                            <  1:3884615/93‑1 (MQ=255)

                tGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTg                                                                         >  2:7838113/1‑93 (MQ=255)

                  ggTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGGTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGt                                                                       >  1:611143/1‑93 (MQ=255)

                   gTATTAGCGGCTTGGGCCATATGATAACCAGCGCGGGTGGTTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTc                                                                      <  1:1322550/93‑1 (MQ=255)

                   gTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTc                                                                      <  2:6405055/93‑1 (MQ=255)

                    tATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGGTTGGTCt                                                                     >  2:374311/1‑93 (MQ=255)

                      ttAGCGGCTTGGGCCATATGGTAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTGCCCGTTTGGTCTGc                                                                   >  1:8685411/1‑93 (MQ=255)

                       tAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCa                                                                  <  1:9379976/93‑1 (MQ=255)

                       tAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCa                                                                  >  2:2450786/1‑93 (MQ=255)

                        aGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCAt                                                                 <  2:7978731/93‑1 (MQ=255)

                           ggCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATcac                                                              >  1:2951791/1‑93 (MQ=255)

                           ggCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATcac                                                              >  1:2278832/1‑93 (MQ=255)

                              ttGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACAtt                                                           <  1:9934487/93‑1 (MQ=255)

                                  gCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtgg                                                       <  2:9454835/93‑1 (MQ=255)

                                    cATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggtg                                                     >  2:3379613/1‑93 (MQ=255)

                                     atatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggtgg                                                    <  1:5785497/93‑1 (MQ=255)

                                     atatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggcgg                                                    >  1:4841849/1‑93 (MQ=255)

                                      tatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGc                                                   >  2:10016598/1‑93 (MQ=255)

                                      tatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGc                                                   >  1:833535/1‑93 (MQ=255)

                                       atGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCa                                                  >  2:2318161/1‑93 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 <  1:2602601/93‑1 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 <  2:6731687/93‑1 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 <  2:5614681/93‑1 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 <  1:4612917/93‑1 (MQ=255)

                                         gATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAtt                                                <  1:6606691/93‑1 (MQ=255)

                                         gATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAtt                                                >  2:8796031/1‑93 (MQ=255)

                                          aTAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTa                                               <  2:6463098/93‑1 (MQ=255)

                                          aTAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTa                                               <  2:8010414/93‑1 (MQ=255)

                                           tAAACAGCGCGGGTGAGTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTaa                                              <  1:7017085/93‑1 (MQ=255)

                                            aaaCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAt                                             >  2:5832268/1‑93 (MQ=255)

                                            aaaCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAt                                             >  2:9919090/1‑93 (MQ=255)

                                              aCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTc                                           <  2:1354299/93‑1 (MQ=255)

                                              aCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTc                                           >  1:4402417/1‑93 (MQ=255)

                                              aCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTc                                           >  1:7531521/1‑93 (MQ=255)

                                                aGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGc                                         <  2:960950/93‑1 (MQ=255)

                                                aGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGc                                         >  2:180222/1‑93 (MQ=255)

                                                 gcgcGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCt                                        >  2:7123374/1‑93 (MQ=255)

                                                 gcgcGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCt                                        <  1:5474329/93‑1 (MQ=255)

                                                 gcgcGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCt                                        <  2:5979944/93‑1 (MQ=255)

                                                  cgcgGGTGATTTCGGACCGATTCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCtt                                       <  2:1902301/93‑1 (MQ=255)

                                                  cgcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCtt                                       >  2:2464730/1‑93 (MQ=255)

                                                   gcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCttt                                      <  2:7333909/93‑1 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    <  1:3382698/93‑1 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    <  1:2542720/93‑1 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    >  2:1302098/1‑93 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    <  1:8593790/93‑1 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    <  1:614311/93‑1 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGGCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    <  2:9048116/93‑1 (MQ=255)

                                                      ggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAcc                                   <  2:4195499/93‑1 (MQ=255)

                                                      ggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAcc                                   >  2:3024402/1‑93 (MQ=255)

                                                         gATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGAc                                <  1:5888859/93‑1 (MQ=255)

                                                          aTTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACg                               >  2:9172611/1‑93 (MQ=255)

                                                          aTTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACg                               >  1:9840307/1‑93 (MQ=255)

                                                           tttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGc                              <  1:6747860/93‑1 (MQ=255)

                                                           tttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGc                              >  2:1659243/1‑93 (MQ=255)

                                                            ttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGcg                             >  1:1545624/1‑92 (MQ=255)

                                                            ttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCa                             <  1:5576747/93‑1 (MQ=255)

                                                              cGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAgg                           <  2:3932765/93‑1 (MQ=255)

                                                                 aCCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGGCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcgg                        >  2:3491355/1‑93 (MQ=255)

                                                                 aCCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcgg                        >  1:6247599/1‑93 (MQ=255)

                                                                  ccGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcggc                       >  2:7152718/1‑93 (MQ=255)

                                                                   cGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCa                      >  2:4515944/1‑93 (MQ=255)

                                                                   cGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCa                      <  1:91181/93‑1 (MQ=255)

                                                                    gATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCAc                     <  2:1461597/93‑1 (MQ=255)

                                                                     aTGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATGCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACg                    <  2:46547/93‑1 (MQ=255)

                                                                      tGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGc                   <  1:8222808/93‑1 (MQ=255)

                                                                       gCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCa                  >  1:3960466/1‑93 (MQ=255)

                                                                       gCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCa                  <  2:2643831/93‑1 (MQ=255)

                                                                          gTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGa               >  1:4258908/1‑93 (MQ=255)

                                                                           tttGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGaa              <  2:7945427/93‑1 (MQ=255)

                                                                              ggTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTc           <  2:319566/93‑1 (MQ=255)

                                                                              ggTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTc           <  2:6988173/93‑1 (MQ=255)

                                                                               gTACCGGTGAATTCCTGCTGTTTCAGGTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCt          <  2:2422008/93‑1 (MQ=255)

                                                                               gTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTTCCGACGCAGGCGGCACGCAGGAAGTCt          >  2:671986/1‑93 (MQ=255)

                                                                                tACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTg         <  1:9201062/93‑1 (MQ=255)

                                                                                 aCCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGc        <  1:2979605/93‑1 (MQ=255)

                                                                                 aCCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGc        <  2:2758710/93‑1 (MQ=255)

                                                                                  ccGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCg       <  2:5904392/93‑1 (MQ=255)

                                                                                    ggTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGt     <  1:3470830/93‑1 (MQ=255)

                                                                                    ggTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGt     >  1:1624865/1‑93 (MQ=255)

                                                                                     gTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTc    <  1:3270205/93‑1 (MQ=255)

                                                                                     gTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTc    >  1:2137926/1‑93 (MQ=255)

                                                                                     gTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTc    >  2:9738976/1‑93 (MQ=255)

                                                                                     gTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTc    <  2:4577477/93‑1 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCa   <  1:616074/93‑1 (MQ=255)

                                                                                       gAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCaa  <  1:2413014/93‑1 (MQ=255)

                                                                                       gAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCaa  >  2:9281660/1‑93 (MQ=255)

TGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAA  >  NC_000913/1697982‑1698161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`