Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,698,875 A→G V499V (GTA→GTG malX → MalX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,698,8750AG100.0% 921.1 / NA 281V499V (GTA→GTGmalXMalX
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (160/121);  total (160/121)

Only 100 of 301 total aligned reads displayed.

TAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAG  >  NC_000913/1698785‑1698965
                                                                                          |                                                                                          
tAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCa                                                                                          >  2:1116063/1‑93 (MQ=255)
tAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCa                                                                                          >  2:2218761/1‑93 (MQ=255)
tAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCa                                                                                          >  2:9148095/1‑93 (MQ=255)
  aCTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAAc                                                                                        >  2:6635007/1‑93 (MQ=255)
    tGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGCCAATCGGGCAATTGGCGTAGTGCAACta                                                                                      >  2:7946695/1‑92 (MQ=255)
     gCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTa                                                                                     >  1:6093115/1‑93 (MQ=255)
      cATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTaa                                                                                    <  2:8206245/93‑1 (MQ=255)
        ttACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATc                                                                                  <  1:6360457/93‑1 (MQ=255)
           cccGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAAc                                                                               <  2:1329102/93‑1 (MQ=255)
              gTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATa                                                                            <  2:1435095/93‑1 (MQ=255)
                cTGGGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAc                                                                          <  2:7773613/93‑1 (MQ=255)
                cTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAc                                                                          <  1:227547/93‑1 (MQ=255)
                cTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAc                                                                          <  2:3236995/93‑1 (MQ=255)
                cTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAc                                                                          >  1:9033833/1‑93 (MQ=255)
                cTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAc                                                                          >  1:4198965/1‑93 (MQ=255)
                 tGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAcc                                                                         <  2:6152992/93‑1 (MQ=255)
                 tGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAAcc                                                                         <  1:7640719/93‑1 (MQ=255)
                  gCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCt                                                                        <  2:4922628/93‑1 (MQ=255)
                  gCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCt                                                                        <  2:8360913/93‑1 (MQ=255)
                  gCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCt                                                                        >  1:1571835/1‑93 (MQ=255)
                   gctttGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTg                                                                       <  2:2073967/91‑1 (MQ=255)
                   cGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTg                                                                       <  1:3356628/93‑1 (MQ=255)
                   cGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTg                                                                       >  1:9768316/1‑93 (MQ=255)
                    gTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGc                                                                      >  2:8907529/1‑93 (MQ=255)
                    gTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGc                                                                      >  2:9614573/1‑93 (MQ=255)
                        gTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGgt                                                                  <  2:8784458/93‑1 (MQ=255)
                         tCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATCACCTGCAGgtt                                                                 >  1:7447776/1‑93 (MQ=255)
                         tCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGgtt                                                                 <  1:2499551/93‑1 (MQ=255)
                           tgtgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGgttgt                                                               <  2:2579601/93‑1 (MQ=255)
                            gtgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGgttgtt                                                              <  2:1575148/93‑1 (MQ=255)
                            gtgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGgttgtt                                                              <  1:712875/93‑1 (MQ=255)
                            gtgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGgttgtt                                                              >  2:1938685/1‑93 (MQ=255)
                             tgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTa                                                             >  1:6502037/1‑93 (MQ=255)
                             tgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTa                                                             <  2:9039754/93‑1 (MQ=255)
                             tgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTa                                                             >  1:1061693/1‑93 (MQ=255)
                             tgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTa                                                             <  2:4165201/93‑1 (MQ=255)
                             tgAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTa                                                             <  2:5629285/93‑1 (MQ=255)
                              gAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTAt                                                            <  1:1243697/93‑1 (MQ=255)
                               aaaGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATc                                                           >  2:4413207/1‑93 (MQ=255)
                               aaaGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATc                                                           <  2:8014306/93‑1 (MQ=255)
                                 aGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCACCTTAATCAACATAACCTGCAGGTTGTTATCgg                                                         <  2:8632976/93‑1 (MQ=255)
                                   agatGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGc                                                       <  2:175407/91‑1 (MQ=255)
                                    tatGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGcc                                                      >  1:4434759/1‑93 (MQ=255)
                                    tatGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGcc                                                      >  1:9618290/1‑93 (MQ=255)
                                     atGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCca                                                     >  1:9327081/1‑93 (MQ=255)
                                      tGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCcac                                                    <  1:8803440/93‑1 (MQ=255)
                                       gTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCcaca                                                   >  2:5136447/1‑93 (MQ=255)
                                             tGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtca                                             <  1:5501961/93‑1 (MQ=255)
                                             tGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtca                                             >  1:8368580/1‑93 (MQ=255)
                                               ttAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagt                                           <  1:3744050/93‑1 (MQ=255)
                                               ttAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagc                                           >  2:9191938/1‑92 (MQ=255)
                                                tAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtc                                          >  1:8577175/1‑93 (MQ=255)
                                                 aaTGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtca                                         >  2:6877495/1‑93 (MQ=255)
                                                 aaTGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtca                                         >  2:4593151/1‑93 (MQ=255)
                                                  aTGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTtcagtcag                                        <  2:4644056/93‑1 (MQ=255)
                                                   tgtgCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTcagtcagt                                       >  2:7073871/1‑93 (MQ=255)
                                                    gtgCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTa                                      >  2:3918198/1‑93 (MQ=255)
                                                     tgCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTaa                                     >  1:4822097/1‑93 (MQ=255)
                                                       cAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTaaaa                                   <  1:9977733/93‑1 (MQ=255)
                                                         ggCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGa                                 >  1:6751437/1‑93 (MQ=255)
                                                         ggCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGa                                 <  1:4282742/93‑1 (MQ=255)
                                                          gCACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGAt                                <  1:8248688/93‑1 (MQ=255)
                                                           cACTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGAta                               >  1:3061933/1‑92 (MQ=255)
                                                             cTGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGaa                             >  1:8104680/1‑93 (MQ=255)
                                                              tGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCcaca                                                   >  1:2061435/1‑70 (MQ=255)
                                                              tGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGaaa                            <  2:1867456/93‑1 (MQ=255)
                                                              tGAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGaaa                            <  2:2392967/93‑1 (MQ=255)
                                                               gAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGaaag                           >  1:2721077/1‑92 (MQ=255)
                                                               gAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAt                           <  2:7566468/93‑1 (MQ=255)
                                                               gAAGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAAt                           >  2:7271878/1‑93 (MQ=255)
                                                                 aGGACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATgg                         >  2:9376772/1‑93 (MQ=255)
                                                                  ggACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGc                        <  1:188700/93‑1 (MQ=255)
                                                                  ggACAATCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGc                        >  2:7376941/1‑93 (MQ=255)
                                                                  ggACAATCGGGCAATCGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGTTGAAATGGc                        <  2:9749751/93‑1 (MQ=255)
                                                                      aaTCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGt                    >  1:9944345/1‑93 (MQ=255)
                                                                       aTCGGGCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTc                   >  2:9524926/1‑93 (MQ=255)
                                                                          gggCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGa                >  1:1795809/1‑93 (MQ=255)
                                                                          gggCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGa                <  2:3133592/93‑1 (MQ=255)
                                                                          gggCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGa                >  2:5791799/1‑93 (MQ=255)
                                                                          cggCAATTGGCGTAGGGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGa                <  1:4976136/92‑1 (MQ=255)
                                                                           ggCAATTGGCGTAGTACAACTTAATCAACATAACGTGCAGGTTGCTATCGGTCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGAt               <  1:4037333/93‑1 (MQ=255)
                                                                            gCAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATg              >  1:1638010/1‑93 (MQ=255)
                                                                             cAATTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGc             >  2:6031696/1‑93 (MQ=255)
                                                                              aaTTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCa            <  1:3199857/93‑1 (MQ=255)
                                                                              aaTTGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCa            >  2:5202696/1‑93 (MQ=255)
                                                                                ttGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATa          <  1:3911579/93‑1 (MQ=255)
                                                                                ttGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATa          <  1:7698372/93‑1 (MQ=255)
                                                                                ttGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATa          >  1:4482540/1‑93 (MQ=255)
                                                                                 tGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATAc         <  1:6624033/93‑1 (MQ=255)
                                                                                 tGGCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATAc         <  1:7007776/93‑1 (MQ=255)
                                                                                  ggCGTAGTGCAACTTAATCAACATAACCTGCAGGTTTTTATCGTGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGGATACt        >  1:3577350/1‑93 (MQ=255)
                                                                                  ggCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACt        >  1:5363818/1‑93 (MQ=255)
                                                                                  ggCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGGAAAAGATGAAATGGCCGGTCTGATGCATACt        >  1:1745058/1‑93 (MQ=255)
                                                                                   gCGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTg       >  1:5082471/1‑93 (MQ=255)
                                                                                    cGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGt      >  1:7497196/1‑93 (MQ=255)
                                                                                    cGTAGTGCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGt      >  2:1172091/1‑93 (MQ=255)
                                                                                      tagtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTcc    >  2:7731673/1‑93 (MQ=255)
                                                                                       agtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCa   <  2:8404858/93‑1 (MQ=255)
                                                                                       agtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCa   <  1:2759083/93‑1 (MQ=255)
                                                                                       agtgCAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATAAAATGGCCGGTCTGATGCATACTGTCCa   <  1:5697285/93‑1 (MQ=255)
                                                                                          |                                                                                          
TAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAG  >  NC_000913/1698785‑1698965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: